Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1675c_(-)_1900248_1900982
DateFri Aug 2 13:30:27 BST 2019
Unique Job ID8a0c457a5ab64f50
SequenceMADRSVRPLR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.286 Y:53.751 Z:32.623
Model (left) based on template c5w5aB_
Top template information
PDB header:transcription
Chain: B: PDB Molecule:hth-type transcriptional regulator cmr;
PDBTitle: crystal structure of mycobacterium tuberculosis crp-fnr family2 transcription factor cmr (rv1675c)
Confidence and coverage
Confidence:100.0% Coverage: 93%
226 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5w5aB_
100.0 98
PDB header:transcription
Chain: B: PDB Molecule:hth-type transcriptional regulator cmr;
PDBTitle: crystal structure of mycobacterium tuberculosis crp-fnr family2 transcription factor cmr (rv1675c)
2c3dv8A_
100.0 16
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family;
PDBTitle: crystal structure of a putative transcriptional regulator of the2 crp/fnr family (eubrec_1222) from eubacterium rectale atcc 33656 at3 2.55 a resolution
3c4ev0A_
100.0 20
PDB header:transcription activator
Chain: A: PDB Molecule:transcription regulator, crp family;
PDBTitle: crystal structure of thermus thermophilus catabolite activator protein
4c3fx3A_
100.0 20
PDB header:camp-binding protein
Chain: A: PDB Molecule:cyclic nucleotide-binding protein;
PDBTitle: structure of a putative camp-binding regulatory protein from2 silicibacter pomeroyi dss-3
5c5e44A_
100.0 16
PDB header:transcription
Chain: A: PDB Molecule:fnr regulator;
PDBTitle: crystal structure of holo-fnr of a. fischeri
6c1zybA_
100.0 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcription regulator, crp family;
PDBTitle: crystal structure of transcription regulator from bacteroides2 thetaiotaomicron vpi-5482 at 2.15 a resolution
7c3e97A_
100.0 20
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family;
PDBTitle: crystal structure of transcriptional regulator of crp/fnr family2 (yp_604437.1) from deinococcus geothermalis dsm 11300 at 1.86 a3 resolution
8c3d0sA_
100.0 25
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: camp receptor protein from m.tuberculosis, camp-free form
9c2bgcA_
100.0 13
PDB header:transcription
Chain: A: PDB Molecule:prfa;
PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes
10c3e6dA_
100.0 10
PDB header:transcription regulation
Chain: A: PDB Molecule:cyclic nucleotide-binding protein;
PDBTitle: crystal structure of cprk c200s
11c2h6bA_
100.0 11
PDB header:dna binding protein
Chain: A: PDB Molecule:chlorophenol reduction gene k;
PDBTitle: crystal structure of oxidized cprk in complex with o-2 chlorophenolacetic acid
12c3iwzB_
100.0 15
PDB header:transcription
Chain: B: PDB Molecule:catabolite activation-like protein;
PDBTitle: the c-di-gmp responsive global regulator clp links cell-cell signaling2 to virulence gene expression in xanthomonas campestris
13c1ft9A_
100.0 19
PDB header:transcription
Chain: A: PDB Molecule:carbon monoxide oxidation system transcription
PDBTitle: structure of the reduced (feii) co-sensing protein from r.2 rubrum
14c2gauA_
100.0 21
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family;
PDBTitle: crystal structure of transcriptional regulator, crp/fnr family from2 porphyromonas gingivalis (apc80792), structural genomics, mcsg
15c2oz6A_
100.0 15
PDB header:dna binding protein
Chain: A: PDB Molecule:virulence factor regulator;
PDBTitle: crystal structure of virulence factor regulator from pseudomonas2 aeruginosa in complex with camp
16c3dkwB_
100.0 16
PDB header:transcription regulator
Chain: B: PDB Molecule:dnr protein;
PDBTitle: crystal structure of dnr from pseudomonas aeruginosa.
17c2fmyB_
100.0 14
PDB header:dna binding protein
Chain: B: PDB Molecule:carbon monoxide oxidation system transcription regulator
PDBTitle: co-dependent transcription factor cooa from carboxydothermus2 hydrogenoformans (imidazole-bound form)
18c3kccA_
100.0 19
PDB header:transcription
Chain: A: PDB Molecule:catabolite gene activator;
PDBTitle: crystal structure of d138l mutant of catabolite gene activator protein
19c4rfaA_
100.0 15
PDB header:transcription regulator
Chain: A: PDB Molecule:lmo0740 protein;
PDBTitle: crystal structure of cyclic nucleotide-binding domain containing2 protein from listeria monocytogenes egd-e
20c2zcwA_
100.0 20
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, fnr/crp family;
PDBTitle: crystal structure of ttha1359, a transcriptional regulator,2 crp/fnr family from thermus thermophilus hb8
21c2zdbA_
not modelled 100.0 16
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, crp family;
PDBTitle: crystal structure of tthb099, a transcriptional regulator crp family2 from thermus thermophilus hb8
22c3la2A_
not modelled 100.0 20
PDB header:transcription
Chain: A: PDB Molecule:global nitrogen regulator;
PDBTitle: crystal structure of ntca in complex with 2-oxoglutarate
23c1zreB_
not modelled 100.0 18
PDB header:gene regulation/dna
Chain: B: PDB Molecule:catabolite gene activator;
PDBTitle: 4 crystal structures of cap-dna with all base-pair substitutions at2 position 6, cap-[6g;17c]icap38 dna
24c4i2oA_
not modelled 99.9 14
PDB header:transcription regulator/dna
Chain: A: PDB Molecule:fixk2 protein;
PDBTitle: the structure of fixk2 from bradyrhizobium japonicum
25c4avcA_
not modelled 99.7 22
PDB header:transferase
Chain: A: PDB Molecule:lysine acetyltransferase;
PDBTitle: crystal structure of protein lysine acetyltransferase rv09982 in complex with acetyl coa and camp
26c5v30B_
not modelled 99.7 15
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of the sensor domain of the transcriptional2 regulator hcpr from porphyromonas gingivalis
27c3gydA_
not modelled 99.7 13
PDB header:dna binding protein
Chain: A: PDB Molecule:cyclic nucleotide-binding domain;
PDBTitle: crystal structure of a cyclic nucleotide-binding domain (mfla_1926)2 from methylobacillus flagellatus kt at 1.79 a resolution
28d1zyba2
not modelled 99.7 11
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
29c4orfA_
not modelled 99.7 22
PDB header:transferase
Chain: A: PDB Molecule:acetyltransferase pat;
PDBTitle: camp-binding acyltransferase from mycobacterium smegmatis, mutant r95k
30d3e5ua2
not modelled 99.7 10
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
31c2pqqD_
not modelled 99.7 22
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: structural genomics, the crystal structure of the n-terminal domain of2 a transcriptional regulator from streptomyces coelicolor a3(2)
32d1ft9a2
not modelled 99.7 18
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:CO-sensing protein CooA, N-terminal domain
33d2gaua2
not modelled 99.7 21
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
34d2oz6a2
not modelled 99.7 11
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
35d2h6ca2
not modelled 99.7 10
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
36d1cx4a1
not modelled 99.7 18
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
37d1o5la1
not modelled 99.6 17
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
38c1o5lA_
not modelled 99.6 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, crp family;
PDBTitle: crystal structure of transcriptional regulator (tm1171) from2 thermotoga maritima at 2.30 a resolution
39c3dn7A_
not modelled 99.6 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cyclic nucleotide binding regulatory protein;
PDBTitle: cyclic nucleotide binding regulatory protein from cytophaga2 hutchinsonii.
40d1i5za2
not modelled 99.6 14
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
41c5jonA_
not modelled 99.6 20
PDB header:transport protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein,potassium/sodium
PDBTitle: crystal structure of the unliganded form of hcn2 cnbd
42c4kg1A_
not modelled 99.6 19
PDB header:lyase
Chain: A: PDB Molecule:diguanylate cyclase;
PDBTitle: cgmp-responsive diguanylate cyclase
43d1cx4a2
not modelled 99.6 20
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
44c4chwB_
not modelled 99.6 23
PDB header:transport protein
Chain: B: PDB Molecule:cyclic nucleotide-gated potassium channel mll3241;
PDBTitle: the electron crystallography structure of the camp-free potassium2 channel mlok1
45c2z69A_
not modelled 99.6 15
PDB header:transcription regulator
Chain: A: PDB Molecule:dnr protein;
PDBTitle: crystal structure of the sensor domain of the transcriptional2 regulator dnr from pseudomonas aeruginosa
46c3mdpA_
not modelled 99.6 20
PDB header:nucleotide binding protein
Chain: A: PDB Molecule:cyclic nucleotide-binding domain (cnmp-bd) protein;
PDBTitle: crystal structure of a putative cyclic nucleotide-binding protein2 (gmet_1532) from geobacter metallireducens gs-15 at 1.90 a resolution
47c5bv6A_
not modelled 99.6 16
PDB header:transferase
Chain: A: PDB Molecule:cgmp-dependent protein kinase 2;
PDBTitle: pkg ii's carboxyl terminal cyclic nucleotide binding domain (cnb-b) in2 a complex with cgmp
48c3idcB_
not modelled 99.5 18
PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase type ii-beta regulatory
PDBTitle: crystal structure of (102-265)riib:c holoenzyme of camp-dependent2 protein kinase
49c5d1iB_
not modelled 99.5 21
PDB header:unknown function
Chain: B: PDB Molecule:cyclic nucleotide-binding protein;
PDBTitle: structure of cyclic nucleotide-binding-like protein from brucella2 abortus bv. 1 str. 9-941
50d2gaua1
not modelled 99.5 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
51d2coha1
not modelled 99.5 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
52d1ne6a2
not modelled 99.5 25
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
53c3j4qC_
not modelled 99.5 18
PDB header:transferase
Chain: C: PDB Molecule:camp-dependent protein kinase type ii-alpha regulatory
PDBTitle: pseudo-atomic model of the akap18-pka complex in a bent conformation2 derived from electron microscopy
54d1vp6a_
not modelled 99.5 23
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
55c5t3nB_
not modelled 99.5 20
PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase regulatory subunit;
PDBTitle: sp-2cl-camps bound to pkar cbd2
56d2coha2
not modelled 99.5 17
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
57c2byvE_
not modelled 99.4 14
PDB header:regulation
Chain: E: PDB Molecule:rap guanine nucleotide exchange factor 4;
PDBTitle: structure of the camp responsive exchange factor epac2 in2 its auto-inhibited state
58d1ft9a1
not modelled 99.4 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
59d1ne6a1
not modelled 99.4 18
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
60c1o7fA_
not modelled 99.4 14
PDB header:regulation
Chain: A: PDB Molecule:camp-dependent rap1 guanine-nucleotide exchange
PDBTitle: crystal structure of the regulatory domain of epac2
61d2h6ca1
not modelled 99.4 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
62c4myiA_
not modelled 99.4 18
PDB header:transferase
Chain: A: PDB Molecule:cgmp-dependent protein kinase, putative;
PDBTitle: crystal structure of pvx_084705
63d2bgca1
not modelled 99.4 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
64c5v4sB_
not modelled 99.4 20
PDB header:transport protein
Chain: B: PDB Molecule:transporter, cation channel family / cyclic nucleotide-
PDBTitle: cryoem structure of a prokaryotic cyclic nucleotide-gated ion channel
65d1o7fa2
not modelled 99.4 13
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
66c6cjtB_
not modelled 99.4 23
PDB header:transport protein
Chain: B: PDB Molecule:sthk cyclic nucleotide-gated potassium channel;
PDBTitle: structure of the sthk cyclic nucleotide-gated potassium channel in2 complex with cgmp
67c3pvbB_
not modelled 99.4 17
PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase type i-alpha regulatory
PDBTitle: crystal structure of (73-244)ria:c holoenzyme of camp-dependent2 protein kinase
68c5c8wB_
not modelled 99.4 13
PDB header:transferase
Chain: B: PDB Molecule:cgmp-dependent protein kinase 2;
PDBTitle: pkg ii's amino terminal cyclic nucleotide binding domain (cnb-a) in a2 complex with cgmp
69c5u6pA_
not modelled 99.3 20
PDB header:transport protein
Chain: A: PDB Molecule:potassium/sodium hyperpolarization-activated cyclic
PDBTitle: structure of the human hcn1 hyperpolarization-activated cyclic2 nucleotide-gated ion channel in complex with camp
70c4f8aA_
not modelled 99.3 19
PDB header:membrane protein, transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 1;
PDBTitle: cyclic nucleotide binding-homology domain from mouse eag1 potassium2 channel
71d3e5ua1
not modelled 99.3 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
72c2n7gA_
not modelled 99.3 17
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2;
PDBTitle: structure of the cyclic nucleotide-binding homology domain of the herg2 channel
73c1cx4A_
not modelled 99.3 18
PDB header:signaling protein
Chain: A: PDB Molecule:camp-dependent protein kinase regulatory subunit
PDBTitle: crystal structure of a deletion mutant of the type ii beta2 regulatory subunit of camp-dependent protein kinase
74c3ogjD_
not modelled 99.3 16
PDB header:transferase
Chain: D: PDB Molecule:prkg1 protein;
PDBTitle: crystal structure of partial apo (92-227) of cgmp-dependent protein2 kinase
75c2ptmA_
not modelled 99.3 19
PDB header:transport protein
Chain: A: PDB Molecule:hyperpolarization-activated (ih) channel;
PDBTitle: structure and rearrangements in the carboxy-terminal region of spih2 channels
76d1wgpa_
not modelled 99.3 18
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
77c3otfA_
not modelled 99.3 19
PDB header:transport protein
Chain: A: PDB Molecule:potassium/sodium hyperpolarization-activated cyclic
PDBTitle: structural basis for the camp-dependent gating in human hcn4 channel
78d2oz6a1
not modelled 99.3 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
79c4d7sB_
not modelled 99.3 24
PDB header:transport protein
Chain: B: PDB Molecule:sthk_cnbd_cgmp;
PDBTitle: structure of the sthk carboxy-terminal region in complex with cgmp
80c6g52H_
not modelled 99.3 15
PDB header:metal transport
Chain: H: PDB Molecule:metal transporter cnnm4;
PDBTitle: crystal structure of the cnmp binding domain of the magnesium2 transporter cnnm4
81c4dinB_
not modelled 99.2 25
PDB header:transferase/transport protein
Chain: B: PDB Molecule:camp-dependent protein kinase type i-beta regulatory
PDBTitle: novel localization and quaternary structure of the pka ri beta2 holoenzyme
82d1o7fa3
not modelled 99.2 23
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
83c3cf6E_
not modelled 99.2 22
PDB header:signaling protein/gtp-binding protein
Chain: E: PDB Molecule:rap guanine nucleotide exchange factor (gef) 4;
PDBTitle: structure of epac2 in complex with cyclic-amp and rap
84d1q3ea_
not modelled 99.2 21
Fold:Double-stranded beta-helix
Superfamily:cAMP-binding domain-like
Family:cAMP-binding domain
85d1i5za1
not modelled 99.2 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
86c3uknC_
not modelled 99.2 20
PDB header:transport protein, membrane protein
Chain: C: PDB Molecule:novel protein similar to vertebrate potassium voltage-gated
PDBTitle: structure of the c-linker/cnbhd of zelk channels in c 2 2 21 space2 group
87c5va1A_
not modelled 99.2 25
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2;
PDBTitle: cryo-em structure of the human ether-a-go-go related k+ channel
88c4lloE_
not modelled 99.2 26
PDB header:transport protein
Chain: E: PDB Molecule:potassium voltage-gated channel subfamily h member 1;
PDBTitle: structure of the eag domain-cnbhd complex of the mouse eag1 channel
89c5k7lA_
not modelled 99.2 27
PDB header:metal transport/calcium binding protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 1;
PDBTitle: single particle cryo-em structure of the voltage-gated k+ channel eag12 bound to the channel inhibitor calmodulin
90c5h3oA_
not modelled 99.2 17
PDB header:transport protein
Chain: A: PDB Molecule:cyclic nucleotide-gated cation channel;
PDBTitle: structure of a eukaryotic cyclic nucleotide-gated channel
91c3of1A_
not modelled 99.2 22
PDB header:transferase
Chain: A: PDB Molecule:camp-dependent protein kinase regulatory subunit;
PDBTitle: crystal structure of bcy1, the yeast regulatory subunit of pka
92c3tnqA_
not modelled 99.2 18
PDB header:transferase
Chain: A: PDB Molecule:camp-dependent protein kinase type ii-beta regulatory
PDBTitle: structure and allostery of the pka riib tetrameric holoenzyme
93c6ftfB_
not modelled 99.2 23
PDB header:signaling protein
Chain: B: PDB Molecule:protein kinase a regulatory subunit, putative;
PDBTitle: regulatory subunit of a camp-independent protein kinase a from2 trypanosoma cruzi at 1.09 a resolution
94c5kbfA_
not modelled 99.1 21
PDB header:transferase
Chain: A: PDB Molecule:camp-dependent protein kinase regulatory subunit, putative;
PDBTitle: camp bound pfpka-r (141-441)
95c5j3uA_
not modelled 99.1 18
PDB header:transferase
Chain: A: PDB Molecule:protein kinase a;
PDBTitle: co-crystal structure of the regulatory domain of toxoplasma gondii pka2 with camp
96c2d93A_
not modelled 99.0 18
PDB header:signaling protein
Chain: A: PDB Molecule:rap guanine nucleotide exchange factor 6;
PDBTitle: solution structure of the cnmp_binding domain of human rap2 guanine nucleotide exchange factor 6
97c3shrA_
not modelled 99.0 18
PDB header:transferase
Chain: A: PDB Molecule:cgmp-dependent protein kinase 1;
PDBTitle: crystal structure of cgmp-dependent protein kinase reveals novel site2 of interchain communication
98c1rgsA_
not modelled 99.0 17
PDB header:kinase
Chain: A: PDB Molecule:camp dependent protein kinase;
PDBTitle: regulatory subunit of camp dependent protein kinase
99c4l11A_
not modelled 99.0 13
PDB header:metal transport
Chain: A: PDB Molecule:agap007709-pa;
PDBTitle: structure of the c-linker/cnbhd of agerg channels
100d1zyba1
not modelled 98.3 26
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
101c5zc2B_
not modelled 97.7 15
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
102c2x4hA_
not modelled 97.6 16
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
103d2hr3a1
not modelled 97.6 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
104c1fx7C_
not modelled 97.5 19
PDB header:signaling protein
Chain: C: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of the iron-dependent regulator (ider) from2 mycobacterium tuberculosis
105d2fxaa1
not modelled 97.5 8
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
106c5jbrA_
not modelled 97.5 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
107c3zplE_
not modelled 97.4 16
PDB header:transcription/dna
Chain: E: PDB Molecule:putative marr-family transcriptional repressor;
PDBTitle: crystal structure of sco3205, a marr family transcriptional regulator2 from streptomyces coelicolor, in complex with dna
108c5cviB_
not modelled 97.4 14
PDB header:transcription regulator
Chain: B: PDB Molecule:slor;
PDBTitle: structure of the manganese regulator slor
109c1g3wA_
not modelled 97.4 14
PDB header:gene regulation
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: cd-cys102ser dtxr
110c4q77B_
not modelled 97.4 5
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator rot;
PDBTitle: crystal structure of rot, a global regulator of virulence genes in2 staphylococcus aureus
111c2w48D_
not modelled 97.4 26
PDB header:transcription
Chain: D: PDB Molecule:sorbitol operon regulator;
PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae
112c2h09A_
not modelled 97.4 22
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator mntr;
PDBTitle: crystal structure of diphtheria toxin repressor like protein2 from e. coli
113c1f5tA_
not modelled 97.4 14
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
114d2fbha1
not modelled 97.4 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
115d3broa1
not modelled 97.4 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
116c2pexA_
not modelled 97.4 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator ohrr;
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
117c2fxaB_
not modelled 97.4 8
PDB header:transcription
Chain: B: PDB Molecule:protease production regulatory protein hpr;
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
118c2it0A_
not modelled 97.4 18
PDB header:transcription/dna
Chain: A: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
119c4nb5D_
not modelled 97.3 14
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
120c3zmdD_
not modelled 97.3 12
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite