Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1680_(-)_1904436_1905260
DateFri Aug 2 13:30:27 BST 2019
Unique Job ID1e5552b8b3c607a4
SequenceMSTEPLVVGA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.842 Y:49.438 Z:55.960
Model (left) based on template c3n5lA_
Top template information
PDB header:transport protein
Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter;
PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 90%
246 residues ( 90% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3n5lA_
100.0 17
PDB header:transport protein
Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter;
PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution
2c5ub6B_
100.0 18
PDB header:metal binding protein
Chain: B: PDB Molecule:phosphate-binding protein;
PDBTitle: xac2383 from xanthomonas citri bound to pyrophosphate
3c3p7iA_
100.0 16
PDB header:transport protein
Chain: A: PDB Molecule:phnd, subunit of alkylphosphonate abc transporter;
PDBTitle: crystal structure of escherichia coli phnd in complex with 2-2 aminoethyl phosphonate
4c5me4A_
100.0 18
PDB header:transport protein
Chain: A: PDB Molecule:probable phosphite transport system-binding protein htxb;
PDBTitle: the structure of htxb from pseudomonas stutzeri in complex with2 hypophosphite to 1.52 a resolution
5c5lq8A_
100.0 19
PDB header:periplasmic binding protein
Chain: A: PDB Molecule:putative phosphonate binding protein for abc transporter;
PDBTitle: 1.52 a resolution structure of phnd1 from prochlorococcus marinus (mit2 9301) in complex with methylphosphonate
6c5o2kE_
100.0 17
PDB header:transport protein
Chain: E: PDB Molecule:probable phosphite transport system-binding protein ptxb;
PDBTitle: native apo-structure of pseudomonas stutzeri ptxb to 2.1 a resolution
7c5lv1C_
100.0 17
PDB header:periplasmic binding protein
Chain: C: PDB Molecule:ptxb;
PDBTitle: 2.12 a resolution structure of ptxb from prochlorococcus marinus (mit2 9301) in complex with phosphite
8c6esvA_
100.0 15
PDB header:signaling protein
Chain: A: PDB Molecule:putative periplasmic phosphite-binding-like protein (pbl)
PDBTitle: structure of the phosphate-bound form of aiox from rhizobium sp. str.2 nt-26
9c5jvbB_
100.0 15
PDB header:transport protein
Chain: B: PDB Molecule:phosphonate abc transporter, periplasmic phosphonate-
PDBTitle: 1.95a resolution structure of ptxb from trichodesmium erythraeum2 ims101 in complex with phosphite
10c3e4rA_
99.9 19
PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes
11c6jf1A_
99.9 11
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: crystal structure of the substrate binding protein of a methionine2 transporter from streptococcus pneumoniae
12c2x26A_
99.9 18
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic aliphatic sulphonates-binding protein;
PDBTitle: crystal structure of the periplasmic aliphatic sulphonate binding2 protein ssua from escherichia coli
13c3uifA_
99.9 15
PDB header:transport protein
Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding
PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt
14c3qslA_
99.9 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50
15c3un6A_
99.9 12
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein saouhsc_00137;
PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
16c3ix1B_
99.9 13
PDB header:biosynthetic protein
Chain: B: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
17c3ix1A_
99.9 13
PDB header:biosynthetic protein
Chain: A: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
18c4q5tA_
99.9 15
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: crystal structure of an atmb (putative membrane lipoprotein) from2 streptococcus mutans ua159 at 1.91 a resolution
19c2x7pA_
99.9 11
PDB header:unknown function
Chain: A: PDB Molecule:possible thiamine biosynthesis enzyme;
PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold
20c4k3fA_
99.9 15
PDB header:transport protein
Chain: A: PDB Molecule:probable tonb-dependent receptor;
PDBTitle: crystal structure of a putative tonb-dependent receptor (pa5505) from2 pseudomonas aeruginosa pao1 at 1.60 a resolution
21d1xs5a_
not modelled 99.9 16
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
22c2de4B_
not modelled 99.9 13
PDB header:hydrolase
Chain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b;
PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid
23c4gotA_
not modelled 99.8 14
PDB header:lipid binding protein
Chain: A: PDB Molecule:methionine-binding lipoprotein metq;
PDBTitle: crystal structure of a putative methionine-binding lipoprotein2 (bsu32730) from bacillus subtilis subsp. subtilis str. 168 at 1.95 a3 resolution
24c4oteA_
not modelled 99.8 14
PDB header:protein transport
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: crystal structure of a putative lipoprotein (cd630_1653) from2 clostridium difficile 630 at 2.20 a resolution
25c3k2dA_
not modelled 99.8 15
PDB header:immune system
Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component;
PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus
26c4h67D_
not modelled 99.8 15
PDB header:transferase
Chain: D: PDB Molecule:pyrimidine precursor biosynthesis enzyme thi5;
PDBTitle: crystal structure of hmp synthase thi5 from s. cerevisiae
27c4esxA_
not modelled 99.8 16
PDB header:transferase
Chain: A: PDB Molecule:pyrimidine biosynthesis enzyme thi13;
PDBTitle: crystal structure of c. albicans thi5 complexed with plp
28c3gxaA_
not modelled 99.8 13
PDB header:protein binding
Chain: A: PDB Molecule:outer membrane lipoprotein gna1946;
PDBTitle: crystal structure of gna1946
29c4qhqA_
not modelled 99.8 13
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: the structure of a nutrient binding protein from burkholderia2 cenocepacia bound to methionine
30c4ef2A_
not modelled 99.8 17
PDB header:methionine-binding protein
Chain: A: PDB Molecule:pheromone cob1/lipoprotein, yaec family;
PDBTitle: crystal structure of a pheromone cob1 precursor/lipoprotein, yaec2 family (ef2496) from enterococcus faecalis v583 at 2.10 a resolution
31c4nmyA_
not modelled 99.8 13
PDB header:transport protein
Chain: A: PDB Molecule:abc-type transport system, extracellular solute-binding
PDBTitle: crystal structure of the thiamin-bound form of substrate-binding2 protein of abc transporter from clostridium difficile
32c4ib2B_
not modelled 99.8 15
PDB header:transport protein
Chain: B: PDB Molecule:putative lipoprotein;
PDBTitle: crystal structure of a putative lipoprotein (rumgna_00858) from2 ruminococcus gnavus atcc 29149 at 1.76 a resolution
33d1eh3a_
not modelled 99.8 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
34d1dtza1
not modelled 99.8 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
35c3up9A_
not modelled 99.8 15
PDB header:methionine-binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative lipoprotein (actodo_00931) from2 actinomyces odontolyticus atcc 17982 at 2.35 a resolution
36d1b1xa1
not modelled 99.8 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
37c3tqwA_
not modelled 99.8 15
PDB header:transport protein
Chain: A: PDB Molecule:methionine-binding protein;
PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii
38c3ir1F_
not modelled 99.8 14
PDB header:protein binding
Chain: F: PDB Molecule:outer membrane lipoprotein gna1946;
PDBTitle: crystal structure of lipoprotein gna1946 from neisseria meningitidis
39d1p99a_
not modelled 99.8 17
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
40c1p99A_
not modelled 99.8 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pg110;
PDBTitle: 1.7a crystal structure of protein pg110 from staphylococcus aureus
41c4ntlA_
not modelled 99.8 11
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein, yaec family;
PDBTitle: crystal structure of a lipoprotein, yaec family (ef3198) from2 enterococcus faecalis v583 at 1.80 a resolution
42d1h76a1
not modelled 99.8 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
43d1ryoa_
not modelled 99.8 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
44d1ce2a1
not modelled 99.8 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
45c2g29A_
not modelled 99.8 13
PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein nrta;
PDBTitle: crystal structure of the periplasmic nitrate-binding2 protein nrta from synechocystis pcc 6803
46d1us5a_
not modelled 99.8 18
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
47c4dddA_
not modelled 99.8 15
PDB header:immune system
Chain: A: PDB Molecule:immunogenic protein;
PDBTitle: crystal structure of an immunogenic protein from ehrlichia chaffeensis
48c3hn0A_
not modelled 99.7 13
PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of an abc transporter (bdi_1369) from2 parabacteroides distasonis at 1.75 a resolution
49d1ieja_
not modelled 99.7 16
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
50d1jnfa1
not modelled 99.7 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
51c5oeiA_
not modelled 99.7 12
PDB header:transport protein
Chain: A: PDB Molecule:uncharacterized protein family upf0065:tat pathway signal;
PDBTitle: r. palustris rpa4515 with oxoadipate
52c2i4cA_
not modelled 99.7 11
PDB header:transport protein
Chain: A: PDB Molecule:bicarbonate transporter;
PDBTitle: crystal structure of bicarbonate transport protein cmpa from2 synechocystis sp. pcc 6803 in complex with bicarbonate and calcium
53c3tmgA_
not modelled 99.7 11
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine, l-proline abc transporter,
PDBTitle: crystal structure of glycine betaine, l-proline abc transporter,2 glycine/betaine/l-proline-binding protein (prox) from borrelia3 burgdorferi
54d2hava1
not modelled 99.7 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
55c3l6gA_
not modelled 99.6 11
PDB header:glycine betaine-binding protein
Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding
PDBTitle: crystal structure of lactococcal opuac in its open conformation
56c2qpqC_
not modelled 99.6 14
PDB header:transport protein
Chain: C: PDB Molecule:protein bug27;
PDBTitle: structure of bug27 from bordetella pertussis
57c2f5xC_
not modelled 99.6 11
PDB header:transport protein
Chain: C: PDB Molecule:bugd;
PDBTitle: structure of periplasmic binding protein bugd
58d1tfda_
not modelled 99.6 11
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
59d2b6da1
not modelled 99.6 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
60d2nxoa1
not modelled 99.6 18
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
61c4x9tA_
not modelled 99.6 9
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein upf0065;
PDBTitle: crystal structure of a tctc solute binding protein from polaromonas2 (bpro_3516, target efi-510338), no ligand
62c2dvzA_
not modelled 99.5 14
PDB header:transport protein
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: structure of a periplasmic transporter
63d2czla1
not modelled 99.5 17
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
64c6hkeB_
not modelled 99.4 13
PDB header:transport protein
Chain: B: PDB Molecule:possible tctc subunit of the tripartite tricarboxylate
PDBTitle: matc (rpa3494) from rhodopseudomonas palustris with bound malate
65d1cb6a2
not modelled 99.4 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
66d1zbma1
not modelled 99.4 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
67d1jnfa2
not modelled 99.4 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
68d1dota1
not modelled 99.4 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
69d1jw1a1
not modelled 99.4 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
70d1b1xa2
not modelled 99.3 11
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
71c4z9nB_
not modelled 99.3 14
PDB header:transport protein
Chain: B: PDB Molecule:amino acid abc transporter, periplasmic amino acid-binding
PDBTitle: abc transporter / periplasmic binding protein from brucella ovis with2 glutathione bound
72d2d3ia2
not modelled 99.3 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
73c4q0cA_
not modelled 99.3 21
PDB header:transferase
Chain: A: PDB Molecule:virulence sensor protein bvgs;
PDBTitle: 3.1 a resolution crystal structure of the b. pertussis bvgs2 periplasmic domain
74c1lfgA_
not modelled 99.2 13
PDB header:transferrin
Chain: A: PDB Molecule:lactoferrin;
PDBTitle: structure of diferric human lactoferrin
75c4oz9A_
not modelled 99.2 12
PDB header:lyase
Chain: A: PDB Molecule:membrane-bound lytic murein transglycosylase f;
PDBTitle: crystal structure of mltf from pseudomonas aeruginosa complexed with2 isoleucine
76c2hpgB_
not modelled 99.1 15
PDB header:ligand binding protein
Chain: B: PDB Molecule:abc transporter, periplasmic substrate-binding
PDBTitle: the crystal structure of a thermophilic trap periplasmic2 binding protein
77c2pfzA_
not modelled 99.1 13
PDB header:transport protein
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: crystal structure of dctp6, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid
78c4p47A_
not modelled 99.1 12
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ochrobactrum anthropi (oant_4429), target efi-510151, c-termius bound3 in ligand binding pocket
79c6onpA_
not modelled 99.1 12
PDB header:unknown function
Chain: A: PDB Molecule:periplasmic binding protein xoxj;
PDBTitle: crystal structure of periplasmic binding protein xoxj from2 methylobacterium extorquens am1
80c4p8bA_
not modelled 99.1 16
PDB header:transport protein
Chain: A: PDB Molecule:trap-type transporter, periplasmic component;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ralstonia eutropha h16 (h16_a1328), target efi-510189, with bound3 (s)-2-hydroxy-2-methyl-3-oxobutanoate ((s)-2-acetolactate)
81c4c0rB_
not modelled 99.0 11
PDB header:transport protein
Chain: B: PDB Molecule:putative amino acid binding protein;
PDBTitle: molecular and structural basis of glutathione import in2 gram-positive bacteria via gsht and the cystine abc3 importer tcybc of streptococcus mutans.
82c1ce2A_
not modelled 99.0 15
PDB header:metal transport
Chain: A: PDB Molecule:protein (lactoferrin);
PDBTitle: structure of diferric buffalo lactoferrin at 2.5a resolution
83c4pbhA_
not modelled 99.0 13
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit, putative;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ruegeria pomeroyi dss-3 (spo1773, target efi-510260) with bound3 benzoic acid
84d1h76a2
not modelled 99.0 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
85c2pfyA_
not modelled 99.0 18
PDB header:transport protein
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: crystal structure of dctp7, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid
86d1dtza2
not modelled 99.0 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
87c3kzgB_
not modelled 99.0 10
PDB header:transport protein
Chain: B: PDB Molecule:arginine 3rd transport system periplasmic binding
PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila
88c5orgA_
not modelled 99.0 12
PDB header:octopine-binding protein
Chain: A: PDB Molecule:octopine-binding periplasmic protein;
PDBTitle: structure of the periplasmic binding protein (pbp) occj from a.2 tumefaciens b6 in complex with octopine.
89c4de8A_
not modelled 99.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:cps2a;
PDBTitle: lytr-cps2a-psr family protein with bound octaprenyl monophosphate2 lipid
90c5sv6A_
not modelled 99.0 15
PDB header:unknown function
Chain: A: PDB Molecule:extracellular solute-binding protein, family 3;
PDBTitle: crystal structure of mxaj from methlophaga aminisulfidivorans mpt
91c4nhbB_
not modelled 99.0 13
PDB header:transport protein
Chain: B: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio desulfuricans (ddes_1525), target efi-510107, with3 bound sn-glycerol-3-phosphate
92c4pddA_
not modelled 99.0 11
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 polaromonas sp js666 (bpro_0088, target efi-510167) bound to d-3 erythronate
93c3mplA_
not modelled 99.0 13
PDB header:signaling protein
Chain: A: PDB Molecule:virulence sensor protein bvgs;
PDBTitle: crystal structure of bordetella pertussis bvgs vft2 domain (double2 mutant f375e/q461e)
94c4pfiA_
not modelled 99.0 16
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 marinobacter aquaeolei vt8 (maqu_2829, target efi-510133), apo open3 structure
95c4napD_
not modelled 99.0 13
PDB header:transport protein
Chain: D: PDB Molecule:extracellular solute-binding protein, family 7;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio alaskensis g20 (dde_0634), target efi-510102, with3 bound d-tryptophan
96c6h2tA_
not modelled 99.0 14
PDB header:signaling protein
Chain: A: PDB Molecule:probable glutamine-binding lipoprotein glnh (glnbp);
PDBTitle: glnh bound to glu, mycobacterium tuberculosis
97c5uh0A_
not modelled 99.0 12
PDB header:hydrolase,oxidoreductase
Chain: A: PDB Molecule:membrane-bound lytic murein transglycosylase f;
PDBTitle: 1.95 angstrom resolution crystal structure of fragment (35-274) of2 membrane-bound lytic murein transglycosylase f from yersinia pestis.
98c4pp0B_
not modelled 99.0 15
PDB header:transport protein
Chain: B: PDB Molecule:nopaline-binding periplasmic protein;
PDBTitle: structure of the pbp noct-m117n in complex with pyronopaline
99c4o94B_
not modelled 99.0 13
PDB header:transport protein
Chain: B: PDB Molecule:trap dicarboxylate transporter dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodopseudomonas palustris haa2 (rpb_3329), target efi-510223, with3 bound succinate
100c4n6dA_
not modelled 99.0 12
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio salexigens dsm2638 (desal_3247), target efi-510112,3 phased with i3c, open complex, c-terminus of symmetry mate bound in4 ligand binding site
101c4ovtA_
not modelled 99.0 11
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ochrobacterium anthropi (oant_3902), target efi-510153, with bound l-3 fuconate
102c4xfeA_
not modelled 98.9 13
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter subunit dctp;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 pseudomonas putida f1 (pput_1203), target efi-500184, with bound d-3 glucuronate
103c4magA_
not modelled 98.9 16
PDB header:sugar binding protein
Chain: A: PDB Molecule:sialic acid binding protein;
PDBTitle: crystal structure of the periplasmic sialic acid binding protein from2 vibrio cholerea
104c4nn3A_
not modelled 98.9 11
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio salexigens (desal_2161), target efi-510109, with bound3 orotic acid
105c4p56C_
not modelled 98.9 12
PDB header:solute-binding protein
Chain: C: PDB Molecule:putative extracellular solute-binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 bordetella bronchiseptica, target efi-510038 (bb2442), with bound3 (r)-mandelate and (s)-mandelate
106c4mnpA_
not modelled 98.9 17
PDB header:sugar binding protein
Chain: A: PDB Molecule:n-acetylneuraminate-binding protein;
PDBTitle: structure of the sialic acid binding protein from fusobacterium2 nucleatum subsp. nucleatum atcc 25586
107c2hauA_
not modelled 98.9 13
PDB header:metal transport
Chain: A: PDB Molecule:serotransferrin;
PDBTitle: apo-human serum transferrin (non-glycosylated)
108c4eq9A_
not modelled 98.9 11
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter substrate-binding protein-amino acid
PDBTitle: 1.4 angstrom crystal structure of abc transporter glutathione-binding2 protein gsht from streptococcus pneumoniae strain canada mdr_19a in3 complex with glutathione
109c4o8mA_
not modelled 98.9 14
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein2 actinobacillus succinogenes 130z, target efi-510004, with bound l-3 galactonate
110c4pfrA_
not modelled 98.9 12
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodobacter sphaeroides (rsph17029_3541, target efi-510203), apo open3 partially disordered
111c2rejA_
not modelled 98.9 14
PDB header:choline-binding protein
Chain: A: PDB Molecule:putative glycine betaine abc transporter protein;
PDBTitle: abc-transporter choline binding protein in unliganded semi-2 closed conformation
112d1dota2
not modelled 98.9 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Transferrin
113c4n8yA_
not modelled 98.9 13
PDB header:transport protein
Chain: A: PDB Molecule:putative trap-type c4-dicarboxylate transport system,
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 bradyrhizobium sp. btai1 b (bbta_0128), target efi-5100563 (bbta_0128), complex with alpha/beta-d-galacturonate
114c4n4uA_
not modelled 98.9 17
PDB header:transport protein
Chain: A: PDB Molecule:putative abc transporter periplasmic solute-binding
PDBTitle: crystal structure of abc transporter solute binding protein bb07192 from bordetella bronchiseptica rb50, target efi-510049
115c4pf6A_
not modelled 98.9 14
PDB header:transport protein
Chain: A: PDB Molecule:c4-dicarboxylate-binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 roseobacter denitrificans (rd1_0742, target efi-510239) with bound 3-3 deoxy-d-manno-oct-2-ulosonic acid (kdo)
116c4mcoC_
not modelled 98.9 17
PDB header:transport protein
Chain: C: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodoferax ferrireducens (rfer_1840), target efi-510211, with bound3 malonate
117c4mx6A_
not modelled 98.9 12
PDB header:transport protein
Chain: A: PDB Molecule:trap-type c4-dicarboxylate:h+ symport system substrate-
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 shewanella oneidensis (so_3134), target efi-510275, with bound3 succinate
118c4pakA_
not modelled 98.9 13
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 verminephrobacter eiseniae ef01-2 (veis_3954, target efi-510324) a3 nephridial symbiont of the earthworm eisenia foetida, bound to (r)-4 pantoic acid
119c4pbqC_
not modelled 98.9 13
PDB header:solute-binding protein
Chain: C: PDB Molecule:putative trap periplasmic solute binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 haemophilus influenzae rdaw (hicg_00826, target efi-510123) with3 bound l-gulonate
120c4ng7A_
not modelled 98.9 14
PDB header:transport protein
Chain: A: PDB Molecule:trap periplasmic solute binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 citrobacter koseri (cko_04899), target efi-510094, apo, open3 structure

Binding site prediction 

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