Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1693_(-)_1917763_1917939
DateFri Aug 2 13:30:29 BST 2019
Unique Job IDe5139e6f83a251bb
SequenceMTIDPDQIRA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:35.888 Y:42.266 Z:28.909
Model (left) based on template d1r3na1
Top template information
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
Confidence and coverage
Confidence: 47.2% Coverage: 95%
55 residues ( 95% of your sequence) have been modelled with 47.2% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1r3na1



47.2 11
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:Bacterial dinuclear zinc exopeptidases
2c2v8gD_



44.5 17
PDB header:hydrolase
Chain: D: PDB Molecule:beta-alanine synthase;
PDBTitle: crystal structure of beta-alanine synthase from2 saccharomyces kluyveri in complex with the product beta-3 alanine
3c1zvzB_



37.0 35
PDB header:protein binding
Chain: B: PDB Molecule:talin 1;
PDBTitle: vinculin head (0-258) in complex with the talin rod residue2 820-844
4c3oqvA_



35.4 30
PDB header:protein binding
Chain: A: PDB Molecule:albc;
PDBTitle: albc, a cyclodipeptide synthase from streptomyces noursei
5c4exqA_



31.1 28
PDB header:biosynthetic protein
Chain: A: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: crystal structure of uroporphyrinogen decarboxylase (upd) from2 burkholderia thailandensis e264
6c2ejaB_



31.1 16
PDB header:lyase
Chain: B: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 aquifex aeolicus
7c3t38B_



29.8 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:arsenate reductase;
PDBTitle: corynebacterium glutamicum thioredoxin-dependent arsenate reductase2 cg_arsc1'
8d1r3sa_



29.4 9
Fold:TIM beta/alpha-barrel
Superfamily:UROD/MetE-like
Family:Uroporphyrinogen decarboxylase, UROD
9d1qvra1



29.1 27
Fold:Double Clp-N motif
Superfamily:Double Clp-N motif
Family:Double Clp-N motif
10c4rclB_



26.7 39
PDB header:chaperone
Chain: B: PDB Molecule:espg3;
PDBTitle: structure of espg3 chaperone from the type vii (esx-3) secretion2 system, space group p43212
11c1jpkA_



25.8 9
PDB header:lyase
Chain: A: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: gly156asp mutant of human urod, human uroporphyrinogen iii2 decarboxylase
12c4kxrC_



25.6 22
PDB header:protein transport
Chain: C: PDB Molecule:espg5;
PDBTitle: structure of the mycobacterium tuberculosis type vii secretion system2 chaperone espg5 in complex with pe25-ppe41 dimer
13c5yh1A_



24.6 15
PDB header:ribosomal protein
Chain: A: PDB Molecule:member of s1p family of ribosomal proteins;
PDBTitle: member of s1p family of ribosomal proteins pf0399 dhh domain
14c4pxeB_



20.6 23
PDB header:hydrolase
Chain: B: PDB Molecule:ureidoglycolate hydrolase;
PDBTitle: the crystal structure of atuah in complex with glyoxylate
15c5l8xA_



20.5 24
PDB header:transferase
Chain: A: PDB Molecule:tetrahydromethanopterin s-methyltransferase subunit a;
PDBTitle: x-ray structure of apo methanocaldococcus jannaschii methyltransferase2 subunit a at 1.85 angstrom
16d1fpoa1



19.9 10
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
17c5vsoA_



19.5 17
PDB header:chaperone
Chain: A: PDB Molecule:yeast dnaj protein 1;
PDBTitle: nmr structure of ydj1 j-domain, a cytosolic hsp40 from saccharomyces2 cerevisiae
18c4w4iA_



19.4 44
PDB header:protein transport
Chain: A: PDB Molecule:esx-3 secretion-associated protein espg3;
PDBTitle: crystal structure of espg3 from the esx-3 type vii secretion system of2 m. tuberculosis
19c5laaB_



18.2 22
PDB header:transferase
Chain: B: PDB Molecule:tetrahydromethanopterin s-methyltransferase subunit a;
PDBTitle: x-ray structure of the methyltransferase subunit a from methanothermus2 fervidus in complex with cobalamin
20c3oqhB_



18.0 25
PDB header:ligase
Chain: B: PDB Molecule:putative uncharacterized protein yvmc;
PDBTitle: crystal structure of b. licheniformis cdps yvmc-blic
21d1khya_



not modelled 17.8 28
Fold:Double Clp-N motif
Superfamily:Double Clp-N motif
Family:Double Clp-N motif
22c2infB_



not modelled 17.0 14
PDB header:lyase
Chain: B: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: crystal structure of uroporphyrinogen decarboxylase from bacillus2 subtilis
23c2zshB_



not modelled 16.8 17
PDB header:hormone receptor
Chain: B: PDB Molecule:della protein gai;
PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor
24c2mniA_



not modelled 15.7 23
PDB header:unknown function
Chain: A: PDB Molecule:hp_q4d059;
PDBTitle: chemical shift assignments and structure of q4d059, a hypothetical2 protein from trypanosoma cruzi
25c3ol4B_



not modelled 15.5 29
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c
26d1j93a_



not modelled 15.5 12
Fold:TIM beta/alpha-barrel
Superfamily:UROD/MetE-like
Family:Uroporphyrinogen decarboxylase, UROD
27c3cyvA_



not modelled 15.2 16
PDB header:lyase
Chain: A: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism
28c5n6yC_



not modelled 14.6 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:nitrogenase vanadium-iron protein delta chain;
PDBTitle: azotobacter vinelandii vanadium nitrogenase
29c4l4wB_



not modelled 14.5 39
PDB header:protein transport
Chain: B: PDB Molecule:espg3;
PDBTitle: structure of espg3 chaperone from the type vii (esx-3) secretion2 system
30c2m0nA_



not modelled 14.5 23
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution structure of a duf3349 annotated protein from mycobacterium2 abscessus, mab_3403c. seattle structural genomics center for3 infectious disease target myaba.17112.a.a2
31d1hdja_



not modelled 13.8 14
Fold:Long alpha-hairpin
Superfamily:Chaperone J-domain
Family:Chaperone J-domain
32c5u2lA_



not modelled 13.2 9
PDB header:protein binding
Chain: A: PDB Molecule:heat shock protein 104;
PDBTitle: crystal structure of the hsp104 n-terminal domain from candida2 albicans
33d1ul7a_



not modelled 12.3 26
Fold:TBP-like
Superfamily:KA1-like
Family:Kinase associated domain 1, KA1
34d1szaa_



not modelled 11.8 22
Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:RPR domain (SMART 00582 )
35c5vbaA_



not modelled 11.6 33
PDB header:chaperone, hydrolase
Chain: A: PDB Molecule:lysozyme, esx-1 secretion-associated protein espg1 chimera;
PDBTitle: structure of espg1 chaperone from the type vii (esx-1) secretion2 system determined with the assistance of n-terminal t4 lysozyme3 fusion
36c6jx3B_



not modelled 11.1 28
PDB header:peptide binding protein
Chain: B: PDB Molecule:tfub1;
PDBTitle: lasso peptide synthetase b1 complexed with the leader peptide
37c4xbiA_



not modelled 10.7 20
PDB header:chaperone
Chain: A: PDB Molecule:clpb protein, putative,green fluorescent protein;
PDBTitle: structure of a malarial protein involved in proteostasis
38c2qsiB_



not modelled 10.5 37
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative hydrogenase expression/formation protein hupg;
PDBTitle: crystal structure of putative hydrogenase expression/formation protein2 hupg from rhodopseudomonas palustris cga009
39d2a26a1



not modelled 10.5 22
Fold:Long alpha-hairpin
Superfamily:Calcyclin-binding protein-like
Family:Siah interacting protein N terminal domain-like
40c3d22A_



not modelled 10.4 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin h-type;
PDBTitle: crystal structure of a poplar thioredoxin h mutant, pttrxh4c61s
41c4l6wA_



not modelled 10.3 37
PDB header:ligase
Chain: A: PDB Molecule:probable propionyl-coa carboxylase beta chain 6;
PDBTitle: carboxyltransferase subunit (accd6) of mycobacterium tuberculosis2 acetyl-coa carboxylase
42c2lkyA_



not modelled 10.2 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b
43c5v1uB_



not modelled 10.0 18
PDB header:protein binding
Chain: B: PDB Molecule:tbib1;
PDBTitle: tbib1 in complex with the tbia(beta) leader peptide
44c6n1fD_



not modelled 9.9 33
PDB header:oxidoreductase
Chain: D: PDB Molecule:oxidoreductase, 2og-fe(ii) oxygenase family;
PDBTitle: crystal structure of oxidoreductase, 2og-fe(ii) oxygenase family, from2 burkholderia pseudomallei
45c4y0bA_



not modelled 9.2 14
PDB header:protein binding
Chain: A: PDB Molecule:double clp-n motif protein;
PDBTitle: the structure of arabidopsis clpt1
46c2cugA_



not modelled 8.9 19
PDB header:chaperone
Chain: A: PDB Molecule:mkiaa0962 protein;
PDBTitle: solution structure of the j domain of the pseudo dnaj2 protein, mouse hypothetical mkiaa0962
47c2lndA_



not modelled 8.5 14
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed protein, pfk fold;
PDBTitle: solution nmr structure of de novo designed protein, pfk fold,2 northeast structural genomics consortium target or134
48d2inwa1



not modelled 8.2 30
Fold:Profilin-like
Superfamily:YeeU-like
Family:YagB/YeeU/YfjZ-like
49d2h28a1



not modelled 8.1 30
Fold:Profilin-like
Superfamily:YeeU-like
Family:YagB/YeeU/YfjZ-like
50c4zr8B_



not modelled 7.9 14
PDB header:lyase
Chain: B: PDB Molecule:uroporphyrinogen decarboxylase;
PDBTitle: structure of uroporphyrinogen decarboxylase from acinetobacter2 baumannii
51c5ovmA_



not modelled 7.6 30
PDB header:chaperone
Chain: A: PDB Molecule:lipase chaperone;
PDBTitle: solution structure of lipase binding domain lid1 of foldase from2 pseudomonas aeruginosa
52c3ghfA_



not modelled 6.9 25
PDB header:cell cycle
Chain: A: PDB Molecule:septum site-determining protein minc;
PDBTitle: crystal structure of the septum site-determining protein minc from2 salmonella typhimurium
53c4irfA_



not modelled 6.6 16
PDB header:chaperone
Chain: A: PDB Molecule:malarial clpb2 atpase/hsp101 protein;
PDBTitle: preliminary structural investigations of a malarial protein secretion2 system
54d2ea9a1



not modelled 6.5 15
Fold:Profilin-like
Superfamily:YeeU-like
Family:YagB/YeeU/YfjZ-like
55c3c4rC_



not modelled 6.5 25
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein encoded by2 cryptic prophage
56c4cvdA_



not modelled 6.4 20
PDB header:hydrolase
Chain: A: PDB Molecule:lysozyme;
PDBTitle: crystal structure of the central repeat of cell wall binding module of2 cpl7
57d2byea1



not modelled 6.2 21
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
58c2kqxA_



not modelled 6.0 23
PDB header:chaperone binding protein
Chain: A: PDB Molecule:curved dna-binding protein;
PDBTitle: nmr structure of the j-domain (residues 2-72) in the2 escherichia coli cbpa
59c3zriA_



not modelled 5.8 12
PDB header:chaperone
Chain: A: PDB Molecule:clpb protein;
PDBTitle: n-domain of clpv from vibrio cholerae
60c2x5eA_



not modelled 5.7 18
PDB header:unknown function
Chain: A: PDB Molecule:upf0271 protein pa4511;
PDBTitle: crystal structure of the hypothetical protein pa4511 from2 pseudomonas aeruginosa
61c6gzuA_



not modelled 5.6 19
PDB header:transferase
Chain: A: PDB Molecule:conserved membrane protein;
PDBTitle: structure of chlamydia abortus effector protein chladub
62c1p9iA_



not modelled 5.5 36
PDB header:unknown function
Chain: A: PDB Molecule:cortexillin i/gcn4 hybrid peptide;
PDBTitle: coiled-coil x-ray structure at 1.17 a resolution
63c3eytA_



not modelled 5.2 31
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein spoa0173;
PDBTitle: crystal structure of thioredoxin-like superfamily protein spoa0173
64c2lgwA_



not modelled 5.1 20
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily b member 2;
PDBTitle: solution structure of the j domain of hsj1a

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