Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1706c_(PPE23)_1932701_1933885
DateFri Aug 2 13:30:30 BST 2019
Unique Job ID040ac9c73a32ca4a
SequenceMTLDVPVNQG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:58.659 Y:72.891 Z:77.070
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 44%
173 residues ( 44% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 52% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 61
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38b1
100.0 32
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c2g38B_
100.0 32
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c4xy3A_
100.0 21
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
98.5 15
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
97.6 15
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c3gvmA_
97.4 16
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
8c4iogD_
97.4 15
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
9c3zbhC_
97.2 14
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
96.5 17
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsB_
95.2 16
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12d1wa8b1
94.8 17
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
13c4lwsA_
94.3 18
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
14c2kg7B_
86.4 15
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
15c4i0xA_
85.7 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
16c4i0xJ_
53.9 20
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17c5frgA_
21.0 63
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
18c1bkvA_
18.0 50
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
19c1bkvC_
17.3 50
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
20c1bkvB_
17.3 50
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
21c4bz4D_
not modelled 16.7 58
PDB header:copper-binding protein
Chain: D: PDB Molecule:copper-repressible polypeptide;
PDBTitle: cora is a surface-associated copper-binding protein2 important in methylomicrobium album bg8 copper acquisition
22c2ke4A_
not modelled 14.0 63
PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
23d1ui5a2
not modelled 11.8 19
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
24c5h9xA_
not modelled 10.8 30
PDB header:hydrolase
Chain: A: PDB Molecule:beta-1,3-glucanase;
PDBTitle: crystal structure of gh family 64 laminaripentaose-producing beta-1,3-2 glucanase from paenibacillus barengoltzii
25c5vzmB_
not modelled 10.4 63
PDB header:protein binding
Chain: B: PDB Molecule:dna repair protein rev1;
PDBTitle: solution nmr structure of human rev1 (932-1039) in complex with2 ubiquitin
26c4lzxB_
not modelled 9.7 31
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-free cam
27d2fcla1
not modelled 9.4 28
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:TM1012-like
28c4m1lB_
not modelled 8.2 36
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-bound cam
29d2np5a2
not modelled 7.7 30
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
30d1khba2
not modelled 7.7 20
Fold:PEP carboxykinase N-terminal domain
Superfamily:PEP carboxykinase N-terminal domain
Family:PEP carboxykinase N-terminal domain
31c2iu1A_
not modelled 7.6 22
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
32c4is4G_
not modelled 7.3 8
PDB header:ligase
Chain: G: PDB Molecule:glutamine synthetase;
PDBTitle: the glutamine synthetase from the dicotyledonous plant m. truncatula2 is a decamer
33c1vytF_
not modelled 7.2 13
PDB header:transport protein
Chain: F: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
34c6rlxA_
not modelled 6.9 71
PDB header:hormone(muscle relaxant)
Chain: A: PDB Molecule:relaxin, a-chain;
PDBTitle: x-ray structure of human relaxin at 1.5 angstroms. comparison to2 insulin and implications for receptor binding determinants
35c6rlxC_
not modelled 6.9 71
PDB header:hormone(muscle relaxant)
Chain: C: PDB Molecule:relaxin, a-chain;
PDBTitle: x-ray structure of human relaxin at 1.5 angstroms. comparison to2 insulin and implications for receptor binding determinants
36c2mv1A_
not modelled 6.9 71
PDB header:signaling protein
Chain: A: PDB Molecule:relaxin a chain;
PDBTitle: solution nmr structure of human relaxin-2
37c2v36D_
not modelled 6.8 35
PDB header:transferase
Chain: D: PDB Molecule:gamma-glutamyltranspeptidase small chain;
PDBTitle: crystal structure of gamma-glutamyl transferase from bacillus subtilis
38c2fulE_
not modelled 6.8 39
PDB header:translation
Chain: E: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of the c-terminal domain of s. cerevisiae eif5
39c1bcvA_
not modelled 6.6 44
PDB header:synthetic peptide
Chain: A: PDB Molecule:peptide corresponding to the major immunogen site of fmd
PDBTitle: synthetic peptide corresponding to the major immunogen site of fmd2 virus, nmr, 10 structures
40c3ibzA_
not modelled 6.4 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative tellurium resistant like protein terd;
PDBTitle: crystal structure of putative tellurium resistant like protein (terd)2 from streptomyces coelicolor a3(2)
41c2k6tA_
not modelled 6.3 71
PDB header:hormone
Chain: A: PDB Molecule:insulin-like 3 a chain;
PDBTitle: solution structure of the relaxin-like factor
42c2h8bA_
not modelled 6.3 71
PDB header:hormone/growth factor
Chain: A: PDB Molecule:insulin-like 3;
PDBTitle: solution structure of insl3
43c4baxH_
not modelled 6.3 8
PDB header:ligase
Chain: H: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from streptomyces2 coelicolor
44c2d3aJ_
not modelled 6.2 17
PDB header:ligase
Chain: J: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of the maize glutamine synthetase2 complexed with adp and methionine sulfoximine phosphate
45c4i6jB_
not modelled 6.1 33
PDB header:transcription
Chain: B: PDB Molecule:f-box/lrr-repeat protein 3;
PDBTitle: a ubiquitin ligase-substrate complex
46c2k6uA_
not modelled 6.1 71
PDB header:hormone
Chain: A: PDB Molecule:insulin-like 3 a chain;
PDBTitle: the solution structure of a conformationally restricted2 fully active derivative of the human relaxin-like factor3 (rlf)
47c3fkyD_
not modelled 6.0 8
PDB header:ligase
Chain: D: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of the glutamine synthetase gln1deltan182 from the yeast saccharomyces cerevisiae
48d1kshb_
not modelled 5.9 18
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:RhoGDI-like
49c5uc0B_
not modelled 5.9 60
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein cog5400;
PDBTitle: crystal structure of beta-barrel-like, uncharacterized protein of2 cog5400 from brucella abortus
50d1k47a1
not modelled 5.7 13
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:GHMP Kinase, N-terminal domain
51c3r5zB_
not modelled 5.6 19
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent reductase from nocardia2 farcinica, with co-factor f420
52c1t0jC_
not modelled 5.5 14
PDB header:signaling protein
Chain: C: PDB Molecule:voltage-dependent l-type calcium channel alpha-1c subunit;
PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
53c4deyB_
not modelled 5.5 6
PDB header:transport protein
Chain: B: PDB Molecule:voltage-dependent l-type calcium channel subunit alpha-1c;
PDBTitle: crystal structure of the voltage dependent calcium channel beta-22 subunit in complex with the cav1.2 i-ii linker.
54c2lkqA_
not modelled 5.5 44
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
55d2q09a1
not modelled 5.4 30
Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Imidazolonepropionase-like
56c4hppA_
not modelled 5.4 17
PDB header:ligase
Chain: A: PDB Molecule:probable glutamine synthetase;
PDBTitle: crystal structure of novel glutamine synthase homolog
57c2le2B_
not modelled 5.2 60
PDB header:hydrolase inhibitor
Chain: B: PDB Molecule:p56;
PDBTitle: novel dimeric structure of phage phi29-encoded protein p56: insights2 into uracil-dna glycosylase inhibition
58c3ng0A_
not modelled 5.2 33
PDB header:ligase
Chain: A: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from synechocystis sp. pcc2 6803
59c2y5tG_
not modelled 5.2 83
PDB header:immune system
Chain: G: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
60c4ndvB_
not modelled 5.2 63
PDB header:sugar binding protein
Chain: B: PDB Molecule:alpha-galactosyl-binding lectin;
PDBTitle: crystal structure of l. decastes alpha-galactosyl-binding lectin in2 complex with globotriose
61c6cgvW_
not modelled 5.2 31
PDB header:virus
Chain: W: PDB Molecule:pre-protein vi;
PDBTitle: revised crystal structure of human adenovirus
62c3j21i_
not modelled 5.2 31
PDB header:ribosome
Chain: I: PDB Molecule:50s ribosomal protein l13p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
63c3izrm_
not modelled 5.1 31
PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l23 (l14p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
64c1htoB_
not modelled 5.1 25
PDB header:ligase
Chain: B: PDB Molecule:glutamine synthetase;
PDBTitle: crystallographic structure of a relaxed glutamine synthetase from2 mycobacterium tuberculosis
65c2qsrA_
not modelled 5.1 38
PDB header:transcription
Chain: A: PDB Molecule:transcription-repair coupling factor;
PDBTitle: crystal structure of c-terminal domain of transcription-repair2 coupling factor
66d1xdpa4
not modelled 5.1 25
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Polyphosphate kinase C-terminal domain
67c5craB_
not modelled 5.1 45
PDB header:hydrolase
Chain: B: PDB Molecule:sdea;
PDBTitle: structure of the sdea dub domain

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