Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1718_(-)_1944816_1945634
DateFri Aug 2 13:30:32 BST 2019
Unique Job ID2ede24f73da63e25
SequenceMSIVITVAPT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.850 Y:48.489 Z:46.886
Model (left) based on template c3chvA_
Top template information
PDB header:metal binding protein
Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim
PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution
Confidence and coverage
Confidence:100.0% Coverage: 99%
270 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3chvA_
100.0 35
PDB header:metal binding protein
Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim
PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution
2c2y7eA_
100.0 37
PDB header:lyase
Chain: A: PDB Molecule:3-keto-5-aminohexanoate cleavage enzyme;
PDBTitle: crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme2 (kce) from candidatus cloacamonas acidaminovorans (tetragonal form)
3c3e49A_
100.0 34
PDB header:metal binding protein
Chain: A: PDB Molecule:uncharacterized protein duf849 with a tim barrel fold;
PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb4003 at 1.75 a resolution
4c3no5C_
100.0 33
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a pfam duf849 domain containing protein2 (reut_a1631) from ralstonia eutropha jmp134 at 1.90 a resolution
5c3lotC_
100.0 34
PDB header:structure genomics, unknown function
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of protein of unknown function (np_070038.1) from2 archaeoglobus fulgidus at 1.89 a resolution
6c3e02A_
100.0 36
PDB header:metal binding protein
Chain: A: PDB Molecule:uncharacterized protein duf849;
PDBTitle: crystal structure of a duf849 family protein (bxe_c0271) from2 burkholderia xenovorans lb400 at 1.90 a resolution
7c3c6cA_
100.0 34
PDB header:hydrolase
Chain: A: PDB Molecule:3-keto-5-aminohexanoate cleavage enzyme;
PDBTitle: crystal structure of a putative 3-keto-5-aminohexanoate cleavage2 enzyme (reut_c6226) from ralstonia eutropha jmp134 at 1.72 a3 resolution
8c5zmyF_
100.0 25
PDB header:hydrolase
Chain: F: PDB Molecule:cis-epoxysuccinate hydrolase;
PDBTitle: crystal structure of a cis-epoxysuccinate hydrolase producing d(-)-2 tartaric acids
9c4nncA_
100.0 28
PDB header:lyase
Chain: A: PDB Molecule:obca, oxalate biosynthetic component a;
PDBTitle: ternary complex of obca with c4-coa adduct and oxalate
10c5ikyA_
100.0 25
PDB header:hydrolase,lyase
Chain: A: PDB Molecule:oxalate biosynthetic component 1;
PDBTitle: apo structure of obc1, a bifunctional enzyme for quorum sensing-2 dependent oxalogenesis
11d1m5wa_
97.1 24
Fold:TIM beta/alpha-barrel
Superfamily:Pyridoxine 5'-phosphate synthase
Family:Pyridoxine 5'-phosphate synthase
12c2h90A_
96.9 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:xenobiotic reductase a;
PDBTitle: xenobiotic reductase a in complex with coumarin
13d1mxsa_
96.9 11
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
14d1r30a_
96.7 16
Fold:TIM beta/alpha-barrel
Superfamily:Radical SAM enzymes
Family:Biotin synthase
15c1r30A_
96.7 16
PDB header:transferase
Chain: A: PDB Molecule:biotin synthase;
PDBTitle: the crystal structure of biotin synthase, an s-adenosylmethionine-2 dependent radical enzyme
16c3cixA_
96.5 18
PDB header:adomet binding protein
Chain: A: PDB Molecule:fefe-hydrogenase maturase;
PDBTitle: x-ray structure of the [fefe]-hydrogenase maturase hyde from2 thermotoga maritima in complex with thiocyanate
17d1h1ya_
96.4 12
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:D-ribulose-5-phosphate 3-epimerase
18c5dlcC_
96.4 19
PDB header:transferase
Chain: C: PDB Molecule:pyridoxine 5'-phosphate synthase;
PDBTitle: x-ray crystal structure of a pyridoxine 5-prime-phosphate synthase2 from pseudomonas aeruginosa
19d1z41a1
96.4 16
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
20c3kruC_
96.4 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase;
PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39
21d1rd5a_
not modelled 96.3 12
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
22c4e38A_
not modelled 96.2 17
PDB header:lyase
Chain: A: PDB Molecule:keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate
PDBTitle: crystal structure of probable keto-hydroxyglutarate-aldolase from2 vibrionales bacterium swat-3 (target efi-502156)
23c1djnB_
not modelled 96.2 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:trimethylamine dehydrogenase;
PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1)
24d1wbha1
not modelled 96.1 13
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
25c1ps9A_
not modelled 96.0 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:2,4-dienoyl-coa reductase;
PDBTitle: the crystal structure and reaction mechanism of e. coli 2,4-dienoyl2 coa reductase
26c3gk0H_
not modelled 95.9 26
PDB header:transferase
Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase;
PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein from2 burkholderia pseudomallei
27c5ocsB_
not modelled 95.9 19
PDB header:flavoprotein
Chain: B: PDB Molecule:putative nadh-depentdent flavin oxidoreductase;
PDBTitle: ene-reductase (er/oye) from ralstonia (cupriavidus) metallidurans
28c3qjaA_
not modelled 95.9 14
PDB header:lyase
Chain: A: PDB Molecule:indole-3-glycerol phosphate synthase;
PDBTitle: crystal structure of the mycobacterium tuberculosis indole-3-glycerol2 phosphate synthase (trpc) in apo form
29d1yxya1
not modelled 95.8 14
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:NanE-like
30c6oviA_
not modelled 95.8 17
PDB header:lyase
Chain: A: PDB Molecule:keto-deoxy-phosphogluconate aldolase;
PDBTitle: crystal structure of kdpg aldolase from legionella pneumophila with2 pyruvate captured at low ph as a covalent carbinolamine intermediate
31c1tx2A_
not modelled 95.7 12
PDB header:transferase
Chain: A: PDB Molecule:dhps, dihydropteroate synthase;
PDBTitle: dihydropteroate synthetase, with bound inhibitor manic, from bacillus2 anthracis
32d1tx2a_
not modelled 95.7 12
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Dihydropteroate synthetase
33c5exkG_
not modelled 95.7 11
PDB header:transferase
Chain: G: PDB Molecule:lipoyl synthase;
PDBTitle: crystal structure of m. tuberculosis lipoyl synthase with 6-2 thiooctanoyl peptide intermediate
34c6bmaA_
not modelled 95.7 15
PDB header:lyase
Chain: A: PDB Molecule:indole-3-glycerol phosphate synthase;
PDBTitle: the crystal structure of indole-3-glycerol phosphate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168
35c3tsmB_
not modelled 95.6 12
PDB header:lyase
Chain: B: PDB Molecule:indole-3-glycerol phosphate synthase;
PDBTitle: crystal structure of indole-3-glycerol phosphate synthase from2 brucella melitensis
36d1vhca_
not modelled 95.6 16
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
37c3igsB_
not modelled 95.4 20
PDB header:isomerase
Chain: B: PDB Molecule:n-acetylmannosamine-6-phosphate 2-epimerase 2;
PDBTitle: structure of the salmonella enterica n-acetylmannosamine-6-phosphate2 2-epimerase
38c3gr7A_
not modelled 95.4 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph dehydrogenase;
PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal crystal form
39c5zjnB_
not modelled 95.2 14
PDB header:isomerase
Chain: B: PDB Molecule:putative n-acetylmannosamine-6-phosphate 2-epimerase;
PDBTitle: structure of n-acetylmannosamine-6-phosphate-2-epimerase from vibrio2 cholerae with n-acetylmannosamine-6-phosphate
40c3q58A_
not modelled 95.0 18
PDB header:isomerase
Chain: A: PDB Molecule:n-acetylmannosamine-6-phosphate 2-epimerase;
PDBTitle: structure of n-acetylmannosamine-6-phosphate epimerase from salmonella2 enterica
41c2v82A_
not modelled 94.8 16
PDB header:lyase
Chain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase;
PDBTitle: kdpgal complexed to kdpgal
42c2c3zA_
not modelled 94.8 17
PDB header:lyase
Chain: A: PDB Molecule:indole-3-glycerol phosphate synthase;
PDBTitle: crystal structure of a truncated variant of indole-3-2 glycerol phosphate synthase from sulfolobus solfataricus
43c3noyA_
not modelled 94.8 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
PDBTitle: crystal structure of ispg (gcpe)
44c3o6cA_
not modelled 94.6 19
PDB header:transferase
Chain: A: PDB Molecule:pyridoxine 5'-phosphate synthase;
PDBTitle: pyridoxal phosphate biosynthetic protein pdxj from campylobacter2 jejuni
45d1ajza_
not modelled 94.6 15
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Dihydropteroate synthetase
46d1ps9a1
not modelled 94.4 14
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
47c4jicB_
not modelled 94.3 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:gtn reductase;
PDBTitle: glycerol trinitrate reductase nera from agrobacterium radiobacter
48d1a53a_
not modelled 94.3 15
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
49d1rpxa_
not modelled 94.2 13
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:D-ribulose-5-phosphate 3-epimerase
50c6mywA_
not modelled 94.2 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:n-ethylmaleimide reductase;
PDBTitle: gluconobacter ene-reductase (gluer) mutant - t36a
51c3k30B_
not modelled 94.1 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:histamine dehydrogenase;
PDBTitle: histamine dehydrogenase from nocardiodes simplex
52c3labA_
not modelled 94.0 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase;
PDBTitle: crystal structure of a putative kdpg (2-keto-3-deoxy-6-2 phosphogluconate) aldolase from oleispira antarctica
53c3hf3A_
not modelled 94.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:chromate reductase;
PDBTitle: old yellow enzyme from thermus scotoductus sa-01
54c2yw3E_
not modelled 93.9 21
PDB header:lyase
Chain: E: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-
PDBTitle: crystal structure analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-2 deydro-3-deoxyphosphogluconate aldolase from tthb1
55c3t7vA_
not modelled 93.8 14
PDB header:transferase
Chain: A: PDB Molecule:methylornithine synthase pylb;
PDBTitle: crystal structure of methylornithine synthase (pylb)
56c3w9zA_
not modelled 93.7 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:trna-dihydrouridine synthase c;
PDBTitle: crystal structure of dusc
57c4qnwA_
not modelled 93.6 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:chanoclavine-i aldehyde reductase;
PDBTitle: crystal structure of easa, an old yellow enzyme from aspergillus2 fumigatus
58c3tr9A_
not modelled 93.5 17
PDB header:transferase
Chain: A: PDB Molecule:dihydropteroate synthase;
PDBTitle: structure of a dihydropteroate synthase (folp) in complex with pteroic2 acid from coxiella burnetii
59d1vc4a_
not modelled 93.4 16
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
60c4rtbA_
not modelled 93.2 15
PDB header:lyase
Chain: A: PDB Molecule:hydg protein;
PDBTitle: x-ray structure of the fefe-hydrogenase maturase hydg from2 carboxydothermus hydrogenoformans
61d2flia1
not modelled 92.9 10
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:D-ribulose-5-phosphate 3-epimerase
62d1oyaa_
not modelled 92.8 27
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
63d1vyra_
not modelled 92.8 16
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
64c4qccA_
not modelled 92.6 18
PDB header:structural protein, lyase
Chain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase, peptidyl-
PDBTitle: structure of a cube-shaped, highly porous protein cage designed by2 fusing symmetric oligomeric domains
65c3bg3B_
not modelled 92.4 13
PDB header:ligase
Chain: B: PDB Molecule:pyruvate carboxylase, mitochondrial;
PDBTitle: crystal structure of human pyruvate carboxylase (missing the biotin2 carboxylase domain at the n-terminus)
66d1djqa1
not modelled 92.2 11
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
67c4rnxA_
not modelled 91.6 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph dehydrogenase 1;
PDBTitle: k154 circular permutation of old yellow enzyme
68c3k13A_
not modelled 91.3 12
PDB header:transferase
Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase;
PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron
69c3tdnB_
not modelled 91.0 11
PDB header:de novo protein
Chain: B: PDB Molecule:flr symmetric alpha-beta tim barrel;
PDBTitle: computationally designed two-fold symmetric tim-barrel protein, flr
70d1tqja_
not modelled 91.0 13
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:D-ribulose-5-phosphate 3-epimerase
71d1vjia_
not modelled 90.2 18
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
72d1ad1a_
not modelled 90.2 13
Fold:TIM beta/alpha-barrel
Superfamily:Dihydropteroate synthetase-like
Family:Dihydropteroate synthetase
73c4bk9B_
not modelled 90.0 13
PDB header:lyase
Chain: B: PDB Molecule:2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxo
PDBTitle: crystal structure of 2-keto-3-deoxy-6-phospho-gluconate aldolase from2 zymomonas mobilis atcc 29191
74c2yx0A_
not modelled 89.9 14
PDB header:metal binding protein
Chain: A: PDB Molecule:radical sam enzyme;
PDBTitle: crystal structure of p. horikoshii tyw1
75c5n2pA_
not modelled 89.9 9
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: sulfolobus solfataricus tryptophan synthase a
76c2vp8A_
not modelled 89.7 15
PDB header:transferase
Chain: A: PDB Molecule:dihydropteroate synthase 2;
PDBTitle: structure of mycobacterium tuberculosis rv1207
77c6qkgB_
not modelled 89.6 11
PDB header:flavoprotein
Chain: B: PDB Molecule:ncr a;
PDBTitle: 2-naphthoyl-coa reductase(ncr)
78c4jn6C_
not modelled 89.6 11
PDB header:lyase/oxidoreductase
Chain: C: PDB Molecule:4-hydroxy-2-oxovalerate aldolase;
PDBTitle: crystal structure of the aldolase-dehydrogenase complex from2 mycobacterium tuberculosis hrv37
79d1j5ta_
not modelled 89.6 13
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
80d1icpa_
not modelled 89.4 20
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
81c5dxxA_
not modelled 89.2 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:artemisinic aldehyde delta(11(13)) reductase;
PDBTitle: crystal structure of dbr2
82c4xp7A_
not modelled 89.1 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:trna-dihydrouridine(20) synthase [nad(p)+]-like;
PDBTitle: crystal structure of human trna dihydrouridine synthase 2
83c6agzA_
not modelled 88.7 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:old yellow enzyme;
PDBTitle: crystal structure of old yellow enzyme from pichia sp. aku4542
84c5visB_
not modelled 88.6 13
PDB header:hydrolase,oxidoreductase
Chain: B: PDB Molecule:dihydropteroate synthase;
PDBTitle: 1.73 angstrom resolution crystal structure of dihydropteroate synthase2 (folp-smz_b27) from soil uncultured bacterium.
85c4tmcB_
not modelled 88.5 22
PDB header:flavoprotein
Chain: B: PDB Molecule:old yellow enzyme;
PDBTitle: crystal structure of old yellow enzyme from candida macedoniensis2 aku4588 complexed with p-hydroxybenzaldehyde
86c5umfB_
not modelled 88.3 15
PDB header:isomerase
Chain: B: PDB Molecule:ribulose-phosphate 3-epimerase;
PDBTitle: crystal structure of a ribulose-phosphate 3-epimerase from neisseria2 gonorrhoeae with bound phosphate
87c3gkaB_
not modelled 88.1 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:n-ethylmaleimide reductase;
PDBTitle: crystal structure of n-ethylmaleimidine reductase from2 burkholderia pseudomallei
88d1gwja_
not modelled 88.0 19
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
89c4u0pB_
not modelled 87.8 17
PDB header:transferase
Chain: B: PDB Molecule:lipoyl synthase 2;
PDBTitle: the crystal structure of lipoyl synthase in complex with s-adenosyl2 homocysteine
90c4cczA_
not modelled 87.8 10
PDB header:transferase
Chain: A: PDB Molecule:methionine synthase;
PDBTitle: crystal structure of human 5-methyltetrahydrofolate-homocysteine2 methyltransferase, the homocysteine and folate binding domains
91d1xcfa_
not modelled 87.6 11
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
92c4df2A_
not modelled 87.5 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph dehydrogenase;
PDBTitle: p. stipitis oye2.6 complexed with p-chlorophenol
93c4a3uB_
not modelled 86.9 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:nadh\:flavin oxidoreductase/nadh oxidase;
PDBTitle: x-structure of the old yellow enzyme homologue from zymomonas mobilis2 (ncr)
94c3atyA_
not modelled 86.7 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:prostaglandin f2a synthase;
PDBTitle: crystal structure of tcoye
95d2zdra2
not modelled 86.6 10
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:NeuB-like
96c3dz1A_
not modelled 86.6 14
PDB header:lyase
Chain: A: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution
97c1ydnA_
not modelled 86.1 12
PDB header:lyase
Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase;
PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35.
98c2gq8A_
not modelled 86.1 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase, fmn-binding;
PDBTitle: structure of sye1, an oye homologue from s. ondeidensis, in complex2 with p-hydroxyacetophenone
99c5aheA_
not modelled 86.1 13
PDB header:isomerase
Chain: A: PDB Molecule:
PDBTitle: crystal structure of salmonella enterica hisa
100c4mwaA_
not modelled 85.7 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
PDBTitle: 1.85 angstrom crystal structure of gcpe protein from bacillus2 anthracis
101c4b5nA_
not modelled 85.3 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase, fmn-binding;
PDBTitle: crystal structure of oxidized shewanella yellow enzyme 4 (sye4)
102c3vmmA_
not modelled 85.1 23
PDB header:ligase
Chain: A: PDB Molecule:alanine-anticapsin ligase bacd;
PDBTitle: crystal structure of bacd, an l-amino acid dipeptide ligase from2 bacillus subtilis
103d1q45a_
not modelled 84.7 17
Fold:TIM beta/alpha-barrel
Superfamily:FMN-linked oxidoreductases
Family:FMN-linked oxidoreductases
104c2bdqA_
not modelled 84.7 9
PDB header:metal transport
Chain: A: PDB Molecule:copper homeostasis protein cutc;
PDBTitle: crystal structure of the putative copper homeostasis protein cutc from2 streptococcus agalactiae, northeast strucural genomics target sar15.
105c6cluC_
not modelled 84.7 14
PDB header:antimicrobial protein
Chain: C: PDB Molecule:dihydropteroate synthase;
PDBTitle: staphylococcus aureus dihydropteroate synthase (sadhps) f17l e208k2 double mutant structure
106c2vefB_
not modelled 84.6 14
PDB header:transferase
Chain: B: PDB Molecule:dihydropteroate synthase;
PDBTitle: dihydropteroate synthase from streptococcus pneumoniae
107d1i4na_
not modelled 84.6 12
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
108d1wa3a1
not modelled 84.3 17
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
109c4jc0B_
not modelled 84.0 16
PDB header:transferase
Chain: B: PDB Molecule:ribosomal protein s12 methylthiotransferase rimo;
PDBTitle: crystal structure of thermotoga maritima holo rimo in complex with2 pentasulfide, northeast structural genomics consortium target vr77
110c1nvmG_
not modelled 83.3 9
PDB header:lyase/oxidoreductase
Chain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase;
PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
111c4rnvD_
not modelled 83.3 25
PDB header:oxidoreductase/inhibitor
Chain: D: PDB Molecule:nadph dehydrogenase 1;
PDBTitle: g303 circular permutation of old yellow enzyme with the inhibitor p-2 hydroxybenzaldehyde
112c2pcqA_
not modelled 83.0 13
PDB header:lyase
Chain: A: PDB Molecule:putative dihydrodipicolinate synthase;
PDBTitle: crystal structure of putative dihydrodipicolinate synthase (ttha0737)2 from thermus thermophilus hb8
113c3si9B_
not modelled 82.5 15
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae
114c5epdA_
not modelled 82.1 10
PDB header:oxidorecctase
Chain: A: PDB Molecule:glycerol trinitrate reductase;
PDBTitle: crystal structure of glycerol trinitrate reductase xdpb from2 agrobacterium sp. r89-1 (apo form)
115c6ei9A_
not modelled 81.9 18
PDB header:flavoprotein
Chain: A: PDB Molecule:trna-dihydrouridine synthase b;
PDBTitle: crystal structure of e. coli trna-dihydrouridine synthase b (dusb)
116c3inpA_
not modelled 81.8 13
PDB header:isomerase
Chain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase;
PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
117c3bg3A_
not modelled 81.5 14
PDB header:ligase
Chain: A: PDB Molecule:pyruvate carboxylase, mitochondrial;
PDBTitle: crystal structure of human pyruvate carboxylase (missing the biotin2 carboxylase domain at the n-terminus)
118c2yciX_
not modelled 81.5 12
PDB header:transferase
Chain: X: PDB Molecule:5-methyltetrahydrofolate corrinoid/iron sulfur protein
PDBTitle: methyltransferase native
119c6daqA_
not modelled 81.4 15
PDB header:lyase
Chain: A: PDB Molecule:phdj;
PDBTitle: phdj bound to substrate intermediate
120c3qc3B_
not modelled 81.4 14
PDB header:isomerase
Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase;
PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite