Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1725c_(-)_1951048_1951758
DateFri Aug 2 13:30:32 BST 2019
Unique Job ID31701f1880112c98
SequenceVQPYGQYCPV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.790 Y:30.634 Z:54.121
Model (left) based on template d2fswa1
Top template information
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
Confidence and coverage
Confidence:100.0% Coverage: 42%
98 residues ( 42% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
216 residues ( 92%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2fswa1
100.0 26
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
2d1z7ua1
100.0 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
3d2f2ea1
100.0 36
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
4c4gcvD_
100.0 34
PDB header:transcription
Chain: D: PDB Molecule:putative transcription protein;
PDBTitle: structure of a putative transcription factor (pa1374)from pseudomonas2 aeruginosa
5c4a5mH_
100.0 26
PDB header:transcription
Chain: H: PDB Molecule:uncharacterized hth-type transcriptional regulator yybr;
PDBTitle: redox regulator hypr in its oxidized form
6c4hqeB_
100.0 22
PDB header:transcription/dna
Chain: B: PDB Molecule:transcriptional regulator qsrr;
PDBTitle: the crystal structure of qsrr-dna complex
7d1yyva1
99.9 29
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
8c3df8A_
99.9 30
PDB header:transcription
Chain: A: PDB Molecule:possible hxlr family transcriptional factor;
PDBTitle: the crystal structure of a possible hxlr family transcriptional factor2 from thermoplasma volcanium gss1
9c5hs9A_
99.9 39
PDB header:dna binding protein
Chain: A: PDB Molecule:hth-type transcriptional regulator yodb;
PDBTitle: crystal structure of the quinone-bound yodb from b. subtilis
10d2hzta1
99.9 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:HxlR-like
11d2cfua1
99.7 16
Fold:SCP-like
Superfamily:SCP-like
Family:Alkylsulfatase C-terminal domain-like
12d1ikta_
99.6 15
Fold:SCP-like
Superfamily:SCP-like
Family:Sterol carrier protein, SCP
13d1c44a_
99.6 13
Fold:SCP-like
Superfamily:SCP-like
Family:Sterol carrier protein, SCP
14c3bdqB_
99.6 16
PDB header:lipid transport
Chain: B: PDB Molecule:sterol carrier protein 2-like 2;
PDBTitle: room tempreture crystal structure of sterol carrier protein-2 2 like-2
15c4ueiA_
99.6 12
PDB header:transferase
Chain: A: PDB Molecule:sterol carrier protein 2/3-oxoacyl-coa thiolase;
PDBTitle: solution structure of the sterol carrier protein domain 22 of helicoverpa armigera
16c3bn8A_
99.5 13
PDB header:transport protein
Chain: A: PDB Molecule:putative sterol carrier protein 2;
PDBTitle: crystal structure of a putative sterol carrier protein type 2 (af1534)2 from archaeoglobus fulgidus dsm 4304 at 2.11 a resolution
17c2yheD_
99.5 15
PDB header:hydrolase
Chain: D: PDB Molecule:sec-alkyl sulfatase;
PDBTitle: structure determination of the stereoselective inverting sec-2 alkylsulfatase pisa1 from pseudomonas sp.
18c4nurB_
99.5 17
PDB header:hydrolase
Chain: B: PDB Molecule:psdsa;
PDBTitle: crystal structure of thermostable alkylsulfatase sdsap from2 pseudomonas sp. s9
19c2cfuA_
99.4 16
PDB header:hydrolase
Chain: A: PDB Molecule:sdsa1;
PDBTitle: crystal structure of sdsa1, an alkylsulfatase from2 pseudomonas aeruginosa, in complex with 1-decane-sulfonic-3 acid.
20d1pz4a_
99.4 13
Fold:SCP-like
Superfamily:SCP-like
Family:Sterol carrier protein, SCP
21c4jgxB_
not modelled 99.4 10
PDB header:lipid binding protein
Chain: B: PDB Molecule:fatty acid-binding protein;
PDBTitle: the structure of sterol carrier protein 2 from the yeast yarrowia2 lipolytica
22c4pdxB_
not modelled 99.4 15
PDB header:hydrolase
Chain: B: PDB Molecule:putative alkyl/aryl-sulfatase yjcs;
PDBTitle: crystal structure of escherchia coli uncharacterized protein yjcs
23c3bkrA_
not modelled 99.4 16
PDB header:lipid binding protein
Chain: A: PDB Molecule:sterol carrier protein-2 like-3;
PDBTitle: crystal structure of sterol carrier protein-2 like-3 (scp2-2 l3) from aedes aegypti
24d1wfra_
not modelled 99.1 14
Fold:SCP-like
Superfamily:SCP-like
Family:Sterol carrier protein, SCP
25c2kkoB_
not modelled 99.0 23
PDB header:dna binding protein
Chain: B: PDB Molecule:possible transcriptional regulatory protein
PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
26c3f6oB_
not modelled 98.9 13
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
27c2oqgA_
not modelled 98.9 28
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
28d1r1ta_
not modelled 98.8 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
29c2lkpB_
not modelled 98.8 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, arsr family;
PDBTitle: solution structure of apo-nmtr
30c1r22B_
not modelled 98.8 19
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
31c3pqkD_
not modelled 98.8 30
PDB header:transcription
Chain: D: PDB Molecule:biofilm growth-associated repressor;
PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa
32d1r1ua_
not modelled 98.7 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
33c2jscB_
not modelled 98.7 25
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator rv1994c/mt2050;
PDBTitle: nmr structure of the cadmium metal-sensor cmtr from mycobacterium2 tuberculosis
34d1ub9a_
not modelled 98.7 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
35c4omzG_
not modelled 98.7 18
PDB header:transcription
Chain: G: PDB Molecule:nolr;
PDBTitle: crystal structure of nolr from sinorhizobium fredii
36c3f6vA_
not modelled 98.7 20
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
37c3f8fA_
not modelled 98.6 21
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr-like family;
PDBTitle: crystal structure of multidrug binding transcriptional regulator lmrr2 complexed with daunomycin
38c3hhhA_
not modelled 98.6 28
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
39d1xmaa_
not modelled 98.5 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PadR-like
40c1xmaA_
not modelled 98.5 18
PDB header:transcription
Chain: A: PDB Molecule:predicted transcriptional regulator;
PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833
41c3ri2B_
not modelled 98.5 24
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, padr-like family;
PDBTitle: crystal structure of padr family transcriptional regulator from2 eggerthella lenta dsm 2243
42c3cuoB_
not modelled 98.4 23
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav;
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
43c3jthA_
not modelled 98.4 22
PDB header:transcription
Chain: A: PDB Molecule:transcription activator hlyu;
PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6
44c6h6pA_
not modelled 98.3 19
PDB header:lipid binding protein
Chain: A: PDB Molecule:ubiquinone biosynthesis protein ubij;
PDBTitle: ubij-scp2 ubiquinone synthesis protein
45d2p4wa1
not modelled 98.3 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PF1790-like
46c3l7wA_
not modelled 98.3 19
PDB header:transcription
Chain: A: PDB Molecule:putative uncharacterized protein smu.1704;
PDBTitle: the crystal structure of smu.1704 from streptococcus mutans ua159
47c5zhcA_
not modelled 98.3 21
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of the padr-family transcriptional regulator rv34882 of mycobacterium tuberculosis h37rv
48c4esbA_
not modelled 98.3 21
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, padr family;
PDBTitle: crystal structure of padr-like transcriptional regulator (bc4206) from2 bacillus cereus strain atcc 14579
49c2nyxB_
not modelled 98.3 18
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404;
PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis
50c2qufB_
not modelled 98.2 15
PDB header:transcription
Chain: B: PDB Molecule:transcription factor pf0095;
PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus
51c6j05B_
not modelled 98.2 27
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
52c6j0eB_
not modelled 98.2 22
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
53c2zkzC_
not modelled 98.2 19
PDB header:transcription
Chain: C: PDB Molecule:transcriptional repressor pagr;
PDBTitle: crystal structure of the transcriptional repressor pagr of bacillus2 anthracis
54c4esfA_
not modelled 98.2 18
PDB header:transcription
Chain: A: PDB Molecule:padr-like transcriptional regulator;
PDBTitle: crystal structure of padr-like transcriptional regulator (bce3449)2 from bacillus cereus strain atcc 10987
55c2gxgA_
not modelled 98.2 14
PDB header:transcription
Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator;
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
56c5dymA_
not modelled 98.1 20
PDB header:dna binding protein
Chain: A: PDB Molecule:padr-family transcriptional regulator;
PDBTitle: crystal structure of a padr family transcription regulator from2 hypervirulent clostridium difficile r20291 - cdpadr_0991 to 1.893 angstrom resolution
57c3f3xA_
not modelled 98.1 11
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of the transcriptional regulator bldr from2 sulfolobus solfataricus
58d3ctaa1
not modelled 98.1 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
59d1lnwa_
not modelled 98.0 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
60c5jlsA_
not modelled 98.0 14
PDB header:transcription
Chain: A: PDB Molecule:adhesin competence repressor;
PDBTitle: crystal structure of adhesin competence repressor (adcr) from2 streptococcus pyogenes (c-terminally his tagged)
61c3zplE_
not modelled 98.0 18
PDB header:transcription/dna
Chain: E: PDB Molecule:putative marr-family transcriptional repressor;
PDBTitle: crystal structure of sco3205, a marr family transcriptional regulator2 from streptomyces coelicolor, in complex with dna
62c5eriA_
not modelled 98.0 10
PDB header:transcription
Chain: A: PDB Molecule:marr family transcriptional regulator;
PDBTitle: marr protein from peptoclostridium difficile da00132
63c5h20A_
not modelled 98.0 19
PDB header:transcription regulator
Chain: A: PDB Molecule:putative padr-family transcriptional regulatory protein;
PDBTitle: x-ray structure of padr-like transcription factor from bacteroid2 fragilis
64c3ctaA_
not modelled 98.0 17
PDB header:transferase
Chain: A: PDB Molecule:riboflavin kinase;
PDBTitle: crystal structure of riboflavin kinase from thermoplasma acidophilum
65d1ulya_
not modelled 97.9 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
66d1u2wa1
not modelled 97.9 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
67c3bj6B_
not modelled 97.9 15
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of marr family transcription regulator sp03579
68d2etha1
not modelled 97.9 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
69c6jbxB_
not modelled 97.9 11
PDB header:transcription/dna
Chain: B: PDB Molecule:fatty acid biosynthesis transcriptional regulator;
PDBTitle: crystal structure of streptococcus pneumoniae fabt in complex with dna
70d2hr3a1
not modelled 97.9 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
71d1jgsa_
not modelled 97.9 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
72d1lj9a_
not modelled 97.9 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
73c3k0lA_
not modelled 97.9 18
PDB header:transcription regulator
Chain: A: PDB Molecule:repressor protein;
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
74c2rdpA_
not modelled 97.9 16
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator marr;
PDBTitle: the structure of a marr family protein from bacillus2 stearothermophilus
75d2fbia1
not modelled 97.9 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
76c3bpxB_
not modelled 97.9 20
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of marr
77c5xpqB_
not modelled 97.9 20
PDB header:transcription
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator rv0081;
PDBTitle: crystal structure of m.tuberculosis rv0081
78c5zc2B_
not modelled 97.9 11
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
79c3bjaA_
not modelled 97.8 16
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family, putative;
PDBTitle: crystal structure of putative marr-like transcription regulator2 (np_978771.1) from bacillus cereus atcc 10987 at 2.38 a resolution
80d1s3ja_
not modelled 97.8 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
81c3g3zA_
not modelled 97.8 13
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis
82c3nqoB_
not modelled 97.8 14
PDB header:transcription
Chain: B: PDB Molecule:marr-family transcriptional regulator;
PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution
83c4b8xB_
not modelled 97.8 18
PDB header:transcription
Chain: B: PDB Molecule:possible marr-transcriptional regulator;
PDBTitle: near atomic resolution crystal structure of sco5413, a marr family2 transcriptional regulator from streptomyces coelicolor
84c4yifE_
not modelled 97.8 12
PDB header:dna binding protein
Chain: E: PDB Molecule:marr family protein rv0880;
PDBTitle: crystal structure of rv0880
85d2fbha1
not modelled 97.8 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
86c3e6mD_
not modelled 97.8 13
PDB header:transcription regulator
Chain: D: PDB Molecule:marr family transcriptional regulator;
PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.
87c4fhtA_
not modelled 97.8 19
PDB header:transcription
Chain: A: PDB Molecule:pcav transcriptional regulator;
PDBTitle: crystal structure of the pcav transcriptional regulator from2 streptomyces coelicolor in complex with its natural ligand
88c3nrvC_
not modelled 97.7 19
PDB header:transcription regulator
Chain: C: PDB Molecule:putative transcriptional regulator (marr/emrr family);
PDBTitle: crystal structure of marr/emrr family transcriptional regulator from2 acinetobacter sp. adp1
89c5zqhA_
not modelled 97.7 14
PDB header:dna binding protein
Chain: A: PDB Molecule:padr family transcriptional regulator;
PDBTitle: crystal structure of streptococcus transcriptional regulator
90c3zmdD_
not modelled 97.7 17
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
91d2a61a1
not modelled 97.7 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
92c2fa5B_
not modelled 97.7 14
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator marr/emrr family;
PDBTitle: the crystal structure of an unliganded multiple antibiotic-2 resistance repressor (marr) from xanthomonas campestris
93c4em1A_
not modelled 97.7 20
PDB header:transcription
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator sar2349;
PDBTitle: staphylococcus aureus marr native
94c2nnnB_
not modelled 97.7 15
PDB header:transcription
Chain: B: PDB Molecule:probable transcriptional regulator;
PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa
95c5jbrA_
not modelled 97.7 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
96d2ozga1
not modelled 97.7 11
Fold:SCP-like
Superfamily:SCP-like
Family:EF1021 C-terminal domain-like
97c3cjnA_
not modelled 97.6 18
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of transcriptional regulator, marr family, from2 silicibacter pomeroyi
98d2bv6a1
not modelled 97.6 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
99c4xrfA_
not modelled 97.6 18
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of mepr like protein complexed with pseudoligands
100d2d1ha1
not modelled 97.6 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
101c5yhxH_
not modelled 97.6 18
PDB header:metal binding protein
Chain: H: PDB Molecule:zinc transport transcriptional regulator;
PDBTitle: structure of lactococcus lactis zitr, wild type
102c4mnuA_
not modelled 97.6 14
PDB header:transcription regulator
Chain: A: PDB Molecule:slya-like transcription regulator;
PDBTitle: crystal structure of uncharacterized slya-like transcription regulator2 from listeria monocytogenes
103c3l9fD_
not modelled 97.6 22
PDB header:transcription regulator
Chain: D: PDB Molecule:putative uncharacterized protein smu.1604c;
PDBTitle: the crystal structure of smu.1604c from streptococcus mutans ua159
104c2it0A_
not modelled 97.6 13
PDB header:transcription/dna
Chain: A: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
105c1f5tA_
not modelled 97.6 15
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
106c2qwwB_
not modelled 97.5 14
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
107c4nb5D_
not modelled 97.5 14
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
108c5dukA_
not modelled 97.5 20
PDB header:transcription
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: n-terminal structure of putative dna binding transcription factor from2 thermoplasmatales archaeon scgc ab-539-n05
109c3kp3B_
not modelled 97.5 11
PDB header:transcription regulator/antibiotic
Chain: B: PDB Molecule:transcriptional regulator tcar;
PDBTitle: staphylococcus epidermidis in complex with ampicillin
110c5x11G_
not modelled 97.5 18
PDB header:transcription/dna
Chain: G: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of bacillus subtilis padr in complex with operator2 dna
111c3r1kA_
not modelled 97.5 10
PDB header:transferase
Chain: A: PDB Molecule:enhanced intracellular survival protein;
PDBTitle: crystal structure of acetyltransferase eis from mycobacterium2 tuberculosis h37rv in complex with coa and an acetamide moiety
112c4g6qA_
not modelled 97.5 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein kfla_6221 from2 kribbella flavida dsm 17836
113c2x4hA_
not modelled 97.4 19
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
114c3b73A_
not modelled 97.4 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phih1 repressor-like protein;
PDBTitle: crystal structure of the phih1 repressor-like protein from haloarcula2 marismortui
115c2fxaB_
not modelled 97.4 13
PDB header:transcription
Chain: B: PDB Molecule:protease production regulatory protein hpr;
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
116c1fx7C_
not modelled 97.4 13
PDB header:signaling protein
Chain: C: PDB Molecule:iron-dependent repressor ider;
PDBTitle: crystal structure of the iron-dependent regulator (ider) from2 mycobacterium tuberculosis
117d2i00a1
not modelled 97.4 12
Fold:SCP-like
Superfamily:SCP-like
Family:EF1021 C-terminal domain-like
118d3broa1
not modelled 97.4 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
119c5aiqD_
not modelled 97.4 26
PDB header:transcription
Chain: D: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of ligand-free nadr
120c5e1xA_
not modelled 97.4 8
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, marr family;
PDBTitle: crystal structure of the organohalide sensing rdhr-cbdba16252 transcriptional regulator in the 3,4-dichlorophenol bound form

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite