Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1741_(-)_1967924_1968172
DateFri Aug 2 13:30:34 BST 2019
Unique Job ID8bd1b648d5944159
SequenceMVIDTSALVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:28.503 Y:32.922 Z:36.859
Model (left) based on template c4xgrG_
Top template information
PDB header:toxin/antitoxin
Chain: G: PDB Molecule:ribonuclease vapc30;
PDBTitle: crystal structure of addiction module from mycobacterial species
Confidence and coverage
Confidence: 99.4% Coverage: 95%
78 residues ( 95% of your sequence) have been modelled with 99.4% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4xgrG_



99.4 67
PDB header:toxin/antitoxin
Chain: G: PDB Molecule:ribonuclease vapc30;
PDBTitle: crystal structure of addiction module from mycobacterial species
2c5wzfB_



97.4 21
PDB header:hydrolase
Chain: B: PDB Molecule:23s rrna-specific endonuclease vapc20;
PDBTitle: crystal structure of mycobacterium tuberculosis vapc20 (rv2549c),2 sarcin-ricin loop cleaving toxin
3c2fe1A_



97.2 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein pae0151;
PDBTitle: crystal structure of pae0151 from pyrobaculum aerophilum
4d2fe1a1



97.2 21
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
5d2h1ca1



97.0 14
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
6c3dboB_



96.8 23
PDB header:toxin/antitoxin
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a member of the vapbc family of toxin-antitoxin2 systems, vapbc-5, from mycobacterium tuberculosis
7c3zvkC_



96.7 15
PDB header:antitoxin/toxin/dna
Chain: C: PDB Molecule:toxin of toxin-antitoxin system;
PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter
8c3h87B_



96.5 21
PDB header:toxin/antitoxin
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis
9d1v8pa_



95.9 13
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
10c1v8pK_



95.7 13
PDB header:structural genomics, unknown function
Chain: K: PDB Molecule:hypothetical protein pae2754;
PDBTitle: crystal structure of pae2754 from pyrobaculum aerophilum
11c6a7vG_



95.7 19
PDB header:toxin/antitoxin
Chain: G: PDB Molecule:ribonuclease vapc11;
PDBTitle: crystal structure of mycobacterium tuberculosis vapbc11 toxin-2 antitoxin complex
12c5x3tD_



95.2 29
PDB header:antitoxin/toxin
Chain: D: PDB Molecule:ribonuclease vapc26;
PDBTitle: vapbc from mycobacterium tuberculosis
13c5sv2A_



93.7 14
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease vapc21;
PDBTitle: toxin vapc21 from mycobacterium tuberculosis
14c3tndC_



92.3 15
PDB header:translation, toxin
Chain: C: PDB Molecule:trna(fmet)-specific endonuclease vapc;
PDBTitle: crystal structure of shigella flexneri vapbc toxin-antitoxin complex
15c5l6mC_



91.9 21
PDB header:hydrolase
Chain: C: PDB Molecule:ribonuclease vapc;
PDBTitle: structure of caulobacter crescentus vapbc1 (vapb1deltac:vapc1 form)
16c4chgC_



91.8 23
PDB header:toxin/antitoxin
Chain: C: PDB Molecule:probable ribonuclease vapc15;
PDBTitle: crystal structure of vapbc15 complex from mycobacterium tuberculosis
17c6nklA_



90.6 14
PDB header:antitoxin
Chain: A: PDB Molecule:ribonuclease vapc;
PDBTitle: 2.2 a resolution structure of vapbc-1 from nontypeable haemophilus2 influenzae
18d1y82a1



65.8 15
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
19d1v96a1



50.6 18
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
20d1w8ia_



40.1 11
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
21c3ix7A_



not modelled 29.8 67
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ttha0540;
PDBTitle: crystal structure of a domain of functionally unknown protein from2 thermus thermophilus hb8
22c2lcqA_



not modelled 23.9 30
PDB header:metal binding protein
Chain: A: PDB Molecule:putative toxin vapc6;
PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii
23d1tqba_



not modelled 18.8 38
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
24d1b10a_



not modelled 18.5 38
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
25d1uw3a_



not modelled 18.3 38
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
26d1xyua_



not modelled 17.9 38
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
27c5ywwA_



not modelled 14.3 44
PDB header:hydrolase
Chain: A: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
28c3i8oA_



not modelled 13.7 22
PDB header:rna binding protein
Chain: A: PDB Molecule:kh domain-containing protein mj1533;
PDBTitle: a domain of a functionally unknown protein from methanocaldococcus2 jannaschii dsm 2661.
29c5f4hF_



not modelled 13.7 44
PDB header:hydrolase
Chain: F: PDB Molecule:nucleotide binding protein pinc;
PDBTitle: archael ruvb-like holiday junction helicase
30d1xyqa_



not modelled 12.4 36
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
31d1xyxa_



not modelled 11.8 36
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
32c1dx0A_



not modelled 11.6 45
PDB header:prion protein
Chain: A: PDB Molecule:prion protein;
PDBTitle: bovine prion protein residues 23-230
33d1dwya_



not modelled 11.6 45
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
34d1xyka_



not modelled 10.7 31
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
35c3cinA_



not modelled 9.7 10
PDB header:isomerase
Chain: A: PDB Molecule:myo-inositol-1-phosphate synthase-related protein;
PDBTitle: crystal structure of a myo-inositol-1-phosphate synthase-related2 protein (tm_1419) from thermotoga maritima msb8 at 1.70 a resolution
36d1yj5a1



not modelled 8.3 44
Fold:HAD-like
Superfamily:HAD-like
Family:phosphatase domain of polynucleotide kinase
37c1fo7A_



not modelled 7.9 36
PDB header:membrane protein
Chain: A: PDB Molecule:prion protein;
PDBTitle: human prion protein mutant e200k fragment 90-231
38d1fo7a_



not modelled 7.9 36
Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
39d1fvpa_



not modelled 7.7 36
Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:Non-fluorescent flavoprotein (luxF, FP390)
40c5jpqd_



not modelled 7.3 12
PDB header:ribosome
Chain: D: PDB Molecule:wd40 domain proteins;
PDBTitle: cryo-em structure of the 90s pre-ribosome
41c6g5iy_



not modelled 7.2 33
PDB header:ribosome
Chain: Y: PDB Molecule:40s ribosomal protein s24;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state r
42c1au7B_



not modelled 6.9 33
PDB header:transcription/dna
Chain: B: PDB Molecule:protein pit-1;
PDBTitle: pit-1 mutant/dna complex
43d1jaea2



not modelled 5.9 27
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
44d1o4wa_



not modelled 5.9 15
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
45c5f4tA_



not modelled 5.7 23
PDB header:cell adhesion
Chain: A: PDB Molecule:izumo sperm-egg fusion protein 1;
PDBTitle: crystal structure of the human sperm izumo1 residues 22-254
46c3c2qA_



not modelled 5.4 33
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized conserved protein;
PDBTitle: crystal structure of conserved putative lor/sdh protein2 from methanococcus maripaludis s2
47c6em5r_



not modelled 5.2 25
PDB header:ribosome
Chain: R: PDB Molecule:60s ribosomal protein l19-a;
PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes

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