Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1744c_(-)_1970996_1971397
DateFri Aug 2 13:30:35 BST 2019
Unique Job ID50a4155431d7d63d
SequenceMVINRSIASI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:29.651 Y:19.927 Z:386.602
Model (left) based on template c3hqvB_
Top template information
PDB header:structural protein, contractile protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain;
PDBTitle: low resolution, molecular envelope structure of type i2 collagen in situ determined by fiber diffraction. single3 type i collagen molecule, rigid body refinement
Confidence and coverage
Confidence: 99.6% Coverage: 98%
130 residues ( 98% of your sequence) have been modelled with 99.6% confidence by the single highest scoring template.
Warning: 86% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3hqvB_
99.6 18
PDB header:structural protein, contractile protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain;
PDBTitle: low resolution, molecular envelope structure of type i2 collagen in situ determined by fiber diffraction. single3 type i collagen molecule, rigid body refinement
2c1ygvA_
99.5 14
PDB header:structural protein/contractile protein
Chain: A: PDB Molecule:collagen i alpha 1;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule: rigid refinment
3c1y0fB_
99.3 16
PDB header:structural protein/contractile protein
Chain: B: PDB Molecule:collagen i alpha 2;
PDBTitle: the structure of collagen type i. single type i collagen2 molecule
4c3bogB_
98.4 16
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
5c3bogA_
98.4 16
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein quasi-racemate
6c2pneA_
98.3 16
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: crystal structure of the snow flea antifreeze protein
7c3boiB_
98.3 16
PDB header:antifreeze protein
Chain: B: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
8c3boiA_
98.3 16
PDB header:antifreeze protein
Chain: A: PDB Molecule:6.5 kda glycine-rich antifreeze protein;
PDBTitle: snow flea antifreeze protein racemate
9c1nayC_
96.8 9
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: gpp-foldon:x-ray structure
10c5ctdA_
96.4 21
PDB header:structural protein
Chain: A: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-1(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
11c5ctdB_
96.4 15
PDB header:structural protein
Chain: B: PDB Molecule:collagen alpha-2(i) chain,collagen alpha-2(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen
12c5ctiC_
96.2 13
PDB header:structural protein
Chain: C: PDB Molecule:collagen alpha-1(i) chain,collagen alpha-3(ix) chain;
PDBTitle: crystal structure of the type ix collagen nc2 hetero-trimerization2 domain with a guest fragment a2a1a1 of type i collagen (native form)
13c2klwA_
95.0 13
PDB header:de novo protein
Chain: A: PDB Molecule:(pkg)10;
PDBTitle: solution structure of an abc collagen heterotrimer reveals a2 single-register helix stabilized by electrostatic3 interactions
14c1k6fB_
88.4 10
PDB header:structural protein
Chain: B: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
15c1k6fD_
88.4 10
PDB header:structural protein
Chain: D: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
16c1k6fA_
88.4 10
PDB header:structural protein
Chain: A: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
17c1k6fE_
88.4 10
PDB header:structural protein
Chain: E: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
18c1k6fC_
88.4 10
PDB header:structural protein
Chain: C: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
19c1k6fF_
88.4 10
PDB header:structural protein
Chain: F: PDB Molecule:collagen triple helix;
PDBTitle: crystal structure of the collagen triple helix model [(pro-pro-gly)2 10]3
20c2cuoC_
74.9 15
PDB header:structural protein
Chain: C: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
21c2cuoF_
not modelled 74.9 15
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
22c3a0mF_
not modelled 63.8 12
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
23c3ah9D_
not modelled 63.3 13
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
24c3ah9B_
not modelled 63.1 15
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
25c3ah9C_
not modelled 63.1 15
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
26c3ah9E_
not modelled 63.1 15
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
27c3ah9F_
not modelled 62.5 12
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
28c3ah9A_
not modelled 61.8 13
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)9 at 1.1 a resolution
29c2cuoE_
not modelled 60.9 12
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
30c2cuoA_
not modelled 60.9 12
PDB header:structural protein
Chain: A: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
31c2cuoB_
not modelled 60.9 12
PDB header:structural protein
Chain: B: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
32c2cuoD_
not modelled 60.9 12
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptide (pro-pro-gly)9;
PDBTitle: collagen model peptide (pro-pro-gly)9
33c2mqsD_
not modelled 22.1 33
PDB header:hydrolase
Chain: D: PDB Molecule:thp_t_chain;
PDBTitle: transient collagen triple helix binding to a key metalloproteinase in2 invasion and development: spin labels to structure
34c2mqsC_
not modelled 19.3 33
PDB header:hydrolase
Chain: C: PDB Molecule:thp_l_and_m_chain;
PDBTitle: transient collagen triple helix binding to a key metalloproteinase in2 invasion and development: spin labels to structure
35c2mqsB_
not modelled 19.3 33
PDB header:hydrolase
Chain: B: PDB Molecule:thp_l_and_m_chain;
PDBTitle: transient collagen triple helix binding to a key metalloproteinase in2 invasion and development: spin labels to structure
36c3a0mC_
not modelled 18.0 15
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
37c4bklG_
not modelled 8.9 13
PDB header:immune system
Chain: G: PDB Molecule:j1 epitope;
PDBTitle: crystal structure of the arthritogenic antibody m2139 (fab2 fragment) in complex with the triple-helical j1 peptide
38c3abnA_
not modelled 8.3 15
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-asp-gly-(pro-pro-gly)4 at 1.022 a
39c3admC_
not modelled 7.8 20
PDB header:structural protein
Chain: C: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
40c4auoH_
not modelled 7.8 27
PDB header:hydrolase/peptide
Chain: H: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
41c4auoE_
not modelled 7.8 27
PDB header:hydrolase/peptide
Chain: E: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
42c3admB_
not modelled 7.2 19
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
43c3admE_
not modelled 7.2 19
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
44c3admF_
not modelled 7.2 19
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
45c3admA_
not modelled 7.2 19
PDB header:structural protein
Chain: A: PDB Molecule:collagen-like peptide;
PDBTitle: crystal structure of (pro-pro-gly)4-hyp-ser-gly-(pro-pro-gly)4
46c4auoD_
not modelled 6.6 27
PDB header:hydrolase/peptide
Chain: D: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
47c4auoG_
not modelled 6.6 27
PDB header:hydrolase/peptide
Chain: G: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
48c4auoF_
not modelled 6.6 27
PDB header:hydrolase/peptide
Chain: F: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
49c3a0mE_
not modelled 6.5 20
PDB header:structural protein
Chain: E: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
50c3a0mB_
not modelled 6.3 16
PDB header:structural protein
Chain: B: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal
51c2d3fD_
not modelled 5.7 19
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
52c1x1kC_
not modelled 5.7 19
PDB header:structural protein
Chain: C: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
53c1x1kB_
not modelled 5.7 19
PDB header:structural protein
Chain: B: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
54c2d3fF_
not modelled 5.7 19
PDB header:structural protein
Chain: F: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
55c2d3fE_
not modelled 5.7 19
PDB header:structural protein
Chain: E: PDB Molecule:collagen model peptides (pro-pro-gly)4-pro-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-pro-hyp-gly-(pro-pro-gly)4
56c1x1kA_
not modelled 5.7 19
PDB header:structural protein
Chain: A: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
57c1x1kD_
not modelled 5.7 19
PDB header:structural protein
Chain: D: PDB Molecule:host-guest peptide (pro-pro-gly)4-(pro-allohyp-
PDBTitle: host-guest peptide (pro-pro-gly)4-(pro-allohyp-gly)-(pro-2 pro-gly)4
58c4auoC_
not modelled 5.7 27
PDB header:hydrolase/peptide
Chain: C: PDB Molecule:triple-helical collagen peptide;
PDBTitle: crystal structure of mmp-1(e200a) in complex with a triple-2 helical collagen peptide
59c3a08D_
not modelled 5.6 12
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4, monoclinic, twinned crystal
60c2d3hD_
not modelled 5.6 12
PDB header:structural protein
Chain: D: PDB Molecule:collagen model peptides (pro-pro-gly)4-hyp-hyp-
PDBTitle: crystal structures of collagen model peptides (pro-pro-gly)2 4-hyp-hyp-gly-(pro-pro-gly)4
61c3a19F_
not modelled 5.6 12
PDB header:structural protein
Chain: F: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-oog-(ppg)4_h monoclinic, twinned crystal
62c3a0mD_
not modelled 5.6 23
PDB header:structural protein
Chain: D: PDB Molecule:collagen-like peptide;
PDBTitle: structure of (ppg)4-ovg-(ppg)4, monoclinic, twinned crystal

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