Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1752_(-)_1981137_1981586
DateFri Aug 2 13:30:35 BST 2019
Unique Job IDbea43feaf16c4cf1
SequenceMDAGCYAVHM ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.229 Y:32.691 Z:27.988
Model (left) based on template d1ydwa2
Top template information
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Glucose 6-phosphate dehydrogenase-like
Confidence and coverage
Confidence: 99.6% Coverage: 54%
80 residues ( 54% of your sequence) have been modelled with 99.6% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
148 residues ( 99%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1ydwa2



99.6 33
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Glucose 6-phosphate dehydrogenase-like
2c3evnA_



99.5 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase, gfo/idh/moca family;
PDBTitle: crystal structure of putative oxidoreductase from streptococcus2 agalactiae 2603v/r
3c3oqbF_



99.4 13
PDB header:oxidoreductase
Chain: F: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of putative oxidoreductase from bradyrhizobium2 japonicum usda 110
4c3e9mC_



99.4 18
PDB header:oxidoreductase
Chain: C: PDB Molecule:oxidoreductase, gfo/idh/moca family;
PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis
5d1h6da2



99.4 19
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Glucose 6-phosphate dehydrogenase-like
6c4miyB_



99.4 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:inositol 2-dehydrogenase/d-chiro-inositol 3-dehydrogenase;
PDBTitle: crystal structure of myo-inositol dehydrogenase from lactobacillus2 casei in complex with nad and myo-inositol
7d1zh8a2



99.3 21
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Glucose 6-phosphate dehydrogenase-like
8c2o48X_



99.3 25
PDB header:oxidoreductase
Chain: X: PDB Molecule:dimeric dihydrodiol dehydrogenase;
PDBTitle: crystal structure of mammalian dimeric dihydrodiol dehydrogenase
9c2glxD_



99.3 13
PDB header:oxidoreductase
Chain: D: PDB Molecule:1,5-anhydro-d-fructose reductase;
PDBTitle: crystal structure analysis of bacterial 1,5-af reductase
10d2nvwa2



99.3 7
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Glucose 6-phosphate dehydrogenase-like
11c3ezyB_



99.3 19
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:dehydrogenase;
PDBTitle: crystal structure of probable dehydrogenase tm_0414 from thermotoga2 maritima
12c4mkzA_



99.3 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:inositol dehydrogenase;
PDBTitle: crystal structure of apo scyllo-inositol dehydrogenase from2 lactobacillus casei at 77k
13c6norB_



99.3 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nad dependent dehydrogenase;
PDBTitle: crystal structure of gend2 from gentamicin a biosynthesis in complex2 with nad
14c2p2sA_



99.2 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of putative oxidoreductase (yp_050235.1) from2 erwinia carotovora atroseptica scri1043 at 1.25 a resolution
15c3e18A_



99.2 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of nad-binding protein from listeria innocua
16c3q2kB_



99.2 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca
17c3rbvA_



99.2 25
PDB header:sugar binding protein
Chain: A: PDB Molecule:sugar 3-ketoreductase;
PDBTitle: crystal structure of kijd10, a 3-ketoreductase from actinomadura2 kijaniata incomplex with nadp
18c3nt5B_



99.2 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:inositol 2-dehydrogenase/d-chiro-inositol 3-dehydrogenase;
PDBTitle: crystal structure of myo-inositol dehydrogenase from bacillus subtilis2 with bound cofactor and product inosose
19c3dtyA_



99.2 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase, gfo/idh/moca family;
PDBTitle: crystal structure of an oxidoreductase from pseudomonas2 syringae
20c2nvwB_



99.2 9
PDB header:transcription
Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein
PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis
21c2ho3D_



not modelled 99.2 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family;
PDBTitle: crystal structure of oxidoreductase, gfo/idh/moca family from2 streptococcus pneumoniae
22c1evjC_



not modelled 99.2 23
PDB header:oxidoreductase
Chain: C: PDB Molecule:glucose-fructose oxidoreductase;
PDBTitle: crystal structure of glucose-fructose oxidoreductase (gfor)2 delta1-22 s64d
23c6a3fB_



not modelled 99.2 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative dehydrogenase;
PDBTitle: levoglucosan dehydrogenase, apo form
24c5a06E_



not modelled 99.1 23
PDB header:oxidoreductase
Chain: E: PDB Molecule:aldose-aldose oxidoreductase;
PDBTitle: crystal structure of aldose-aldose oxidoreductase from2 caulobacter crescentus complexed with sorbitol
25c3ec7C_



not modelled 99.1 7
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative dehydrogenase;
PDBTitle: crystal structure of putative dehydrogenase from salmonella2 typhimurium lt2
26c3ceaA_



not modelled 99.1 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:myo-inositol 2-dehydrogenase;
PDBTitle: crystal structure of myo-inositol 2-dehydrogenase (np_786804.1) from2 lactobacillus plantarum at 2.40 a resolution
27c5uibA_



not modelled 99.1 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase protein;
PDBTitle: crystal structure of an oxidoreductase from agrobacterium radiobacter2 in complex with nad+, l-tartaric acid and magnesium
28c5yabD_



not modelled 99.1 20
PDB header:oxidoreductase
Chain: D: PDB Molecule:scyllo-inositol dehydrogenase with l-glucose dehydrogenase
PDBTitle: crystal structure of scyllo-inositol dehydrogenase with l-glucose2 dehydrogenase activity
29c1h6dL_



not modelled 99.1 22
PDB header:protein translocation
Chain: L: PDB Molecule:precursor form of glucose-fructose
PDBTitle: oxidized precursor form of glucose-fructose oxidoreductase2 from zymomonas mobilis complexed with glycerol
30c1ofgF_



not modelled 99.1 22
PDB header:oxidoreductase
Chain: F: PDB Molecule:glucose-fructose oxidoreductase;
PDBTitle: glucose-fructose oxidoreductase
31c4hktA_



not modelled 99.1 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:inositol 2-dehydrogenase;
PDBTitle: crystal structure of a putative myo-inositol dehydrogenase from2 sinorhizobium meliloti 1021 (target psi-012312)
32c4gqaC_



not modelled 99.0 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:nad binding oxidoreductase;
PDBTitle: crystal structure of nad binding oxidoreductase from klebsiella2 pneumoniae
33c4h3vA_



not modelled 99.0 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:oxidoreductase domain protein;
PDBTitle: crystal structure of oxidoreductase domain protein from kribbella2 flavida
34c2q4eB_



not modelled 99.0 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:probable oxidoreductase at4g09670;
PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at4g09670
35c3ip3D_



not modelled 99.0 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:oxidoreductase, putative;
PDBTitle: structure of putative oxidoreductase (tm_0425) from thermotoga2 maritima
36c3euwB_



not modelled 99.0 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:myo-inositol dehydrogenase;
PDBTitle: crystal structure of a myo-inositol dehydrogenase from corynebacterium2 glutamicum atcc 13032
37c4fb5A_



not modelled 99.0 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable oxidoreductase protein;
PDBTitle: crystal structure of a probable oxidoreduxtase protein
38c1tltB_



not modelled 99.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase (virulence factor mvim homolog);
PDBTitle: crystal structure of a putative oxidoreductase (virulence factor mvim2 homolog)
39c3btuD_



not modelled 98.9 11
PDB header:transcription
Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein
PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k]
40c6jnkA_



not modelled 98.9 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:l-arabinose 1-dehydrogenase (nad(p)(+));
PDBTitle: crystal structure of azospirillum brasilense l-arabinose 1-2 dehydrogenase (nadp-bound form)
41c3u3xJ_



not modelled 98.9 22
PDB header:oxidoreductase
Chain: J: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of a putative oxidoreductase from sinorhizobium2 meliloti 1021
42c3v5nA_



not modelled 98.9 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase;
PDBTitle: the crystal structure of oxidoreductase from sinorhizobium meliloti
43c1zh8B_



not modelled 98.8 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of oxidoreductase (tm0312) from thermotoga maritima2 at 2.50 a resolution
44c4ew6A_



not modelled 98.8 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-galactose-1-dehydrogenase protein;
PDBTitle: crystal structure of d-galactose-1-dehydrogenase protein from2 rhizobium etli
45c4hadD_



not modelled 98.8 16
PDB header:oxidoreductase
Chain: D: PDB Molecule:probable oxidoreductase protein;
PDBTitle: crystal structure of probable oxidoreductase protein from rhizobium2 etli cfn 42
46c5b3uB_



not modelled 98.8 23
PDB header:transferase
Chain: B: PDB Molecule:biliverdin reductase;
PDBTitle: crystal structure of biliverdin reductase in complex with nadp+ from2 synechocystis sp. pcc 6803
47c3fd8A_



not modelled 98.8 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase, gfo/idh/moca family;
PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis
48c3m2tA_



not modelled 98.7 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable dehydrogenase;
PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum
49c3db2C_



not modelled 98.7 14
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative nadph-dependent oxidoreductase;
PDBTitle: crystal structure of a putative nadph-dependent oxidoreductase2 (dhaf_2064) from desulfitobacterium hafniense dcb-2 at 1.70 a3 resolution
50c3gfgB_



not modelled 98.7 8
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized oxidoreductase yvaa;
PDBTitle: structure of putative oxidoreductase yvaa from bacillus subtilis in2 triclinic form
51c1lc3A_



not modelled 98.7 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:biliverdin reductase a;
PDBTitle: crystal structure of a biliverdin reductase enzyme-cofactor2 complex
52c3kuxA_



not modelled 98.7 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxidoreductase;
PDBTitle: structure of the ypo2259 putative oxidoreductase from yersinia pestis
53c3fhlC_



not modelled 98.6 18
PDB header:oxidoreductase
Chain: C: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of a putative oxidoreductase from bacteroides2 fragilis nctc 9343
54c3c1aB_



not modelled 98.6 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of a putative oxidoreductase (zp_00056571.1) from2 magnetospirillum magnetotacticum ms-1 at 1.85 a resolution
55c3f4lF_



not modelled 98.6 15
PDB header:oxidoreductase
Chain: F: PDB Molecule:putative oxidoreductase yhhx;
PDBTitle: crystal structure of a probable oxidoreductase yhhx in2 triclinic form. northeast structural genomics target er647
56c3e82A_



not modelled 98.5 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of a putative oxidoreductase from2 klebsiella pneumoniae
57c3uuwB_



not modelled 98.5 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase with nad(p)-binding rossmann-fold
PDBTitle: 1.63 angstrom resolution crystal structure of dehydrogenase (mvim)2 from clostridium difficile.
58c4oo3A_



not modelled 98.5 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a putative oxidoreductase (parmer_00841) from2 parabacteroides merdae atcc 43184 at 2.23 a resolution
59d1tlta2



not modelled 98.5 16
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Glucose 6-phosphate dehydrogenase-like
60c3oa0B_



not modelled 98.4 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb;
PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca
61c3moiA_



not modelled 98.4 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:probable dehydrogenase;
PDBTitle: the crystal structure of the putative dehydrogenase from bordetella2 bronchiseptica rb50
62d1xeaa2



not modelled 98.3 7
Fold:FwdE/GAPDH domain-like
Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Family:Glucose 6-phosphate dehydrogenase-like
63c3oa2B_



not modelled 98.2 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:wbpb;
PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from pseudomonas2 aeruginosa in complex with nad at 1.5 angstrom resolution
64c2ixaA_



not modelled 98.1 8
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-n-acetylgalactosaminidase;
PDBTitle: a-zyme, n-acetylgalactosaminidase
65c1xeaD_



not modelled 98.1 7
PDB header:oxidoreductase
Chain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family;
PDBTitle: crystal structure of a gfo/idh/moca family oxidoreductase2 from vibrio cholerae
66c4gmfD_



not modelled 95.5 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:yersiniabactin biosynthetic protein ybtu;
PDBTitle: apo structure of a thiazolinyl imine reductase from yersinia2 enterocolitica (irp3)
67c1j5pA_



not modelled 92.3 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:aspartate dehydrogenase;
PDBTitle: crystal structure of aspartate dehydrogenase (tm1643) from thermotoga2 maritima at 1.9 a resolution
68c6g1mA_



not modelled 91.8 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:dihydrodipicolinate reductase;
PDBTitle: amine dehydrogenase from petrotoga mobilis; open and closed form
69c6iaqA_



not modelled 90.5 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:dihydrodipicolinate reductase n-terminus domain-containing
PDBTitle: structure of amine dehydrogenase from mycobacterium smegmatis
70c2e12B_



not modelled 28.7 14
PDB header:translation
Chain: B: PDB Molecule:hypothetical protein xcc3642;
PDBTitle: the crystal structure of xc5848 from xanthomonas campestris2 adopting a novel variant of sm-like motif
71d1xsza2



not modelled 14.8 23
Fold:TBP-like
Superfamily:RalF, C-terminal domain
Family:RalF, C-terminal domain
72c2c55A_



not modelled 11.9 21
PDB header:viral protein
Chain: A: PDB Molecule:protein p6;
PDBTitle: solution structure of the human immunodeficiency virus type2 1 p6 protein
73c5lnbB_



not modelled 11.7 21
PDB header:hydrolase
Chain: B: PDB Molecule:ubiquitin-like-specific protease 2;
PDBTitle: crystal structure of the de-sumoylating protease
74c3eayA_



not modelled 11.5 21
PDB header:hydrolase
Chain: A: PDB Molecule:sentrin-specific protease 7;
PDBTitle: crystal structure of the human senp7 catalytic domain
75c6iauB_



not modelled 8.9 9
PDB header:oxidoreductase
Chain: B: PDB Molecule:amine dehydrogenase;
PDBTitle: amine dehydrogenase from cystobacter fuscus in complex with nadp+ and2 cyclohexylamine
76c3fm2A_



not modelled 7.6 11
PDB header:heme-binding protein
Chain: A: PDB Molecule:uncharacterized protein, distantly related to a heme
PDBTitle: crystal structure of a putative heme-binding protein (ava_4353) from2 anabaena variabilis atcc 29413 at 1.80 a resolution
77c5hagA_



not modelled 7.0 14
PDB header:hydrolase
Chain: A: PDB Molecule:deubiquitinase and deneddylase dub1;
PDBTitle: structure of chlamydia trachomatis effector protein chladub1
78c5iroD_



not modelled 6.7 19
PDB header:immune system/transcription
Chain: D: PDB Molecule:e3 19 kda protein;
PDBTitle: crystal structure of a complex between the human adenovirus type 4 e3-2 19k protein and mhc class molecule hla-a2/tax
79d2bkra1



not modelled 6.5 23
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Adenain-like
80c4z92A_



not modelled 6.5 27
PDB header:virus
Chain: A: PDB Molecule:capsid subunit vp1;
PDBTitle: crystal structure of parechovirus-1 virion
81d1slqa_



not modelled 6.2 16
Fold:VP4 membrane interaction domain
Superfamily:VP4 membrane interaction domain
Family:VP4 membrane interaction domain
82d1n0ea_



not modelled 5.9 10
Fold:Double-split beta-barrel
Superfamily:AbrB/MazE/MraZ-like
Family:Hypothetical protein MraZ
83c6m9yD_



not modelled 5.6 13
PDB header:fluorescent protein
Chain: D: PDB Molecule:fluorescent protein lanfp6a;
PDBTitle: x-ray structure of branchiostoma floridae fluorescent protein lanfp6a
84c6h9iB_



not modelled 5.3 29
PDB header:rna binding protein
Chain: B: PDB Molecule:csf5;
PDBTitle: csf5, crispr-cas type iv cas6 crrna endonuclease
85c6dg4A_



not modelled 5.3 21
PDB header:hydrolase
Chain: A: PDB Molecule:ulp1-like sumo protease;
PDBTitle: structure of the chaetomium thermophilum ulp1-like sumo protease2 catalytic domain

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