Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1753c_(PPE24)_1981621_1984782
DateFri Aug 2 13:30:36 BST 2019
Unique Job ID34c91258763c1899
SequenceMNFSVLPPEI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:59.669 Y:71.855 Z:69.688
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 16%
173 residues ( 16% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Warning: 80% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 51
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2c2g38B_
100.0 32
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
3d2g38b1
100.0 32
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
4c4xy3A_
100.0 18
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
97.3 15
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
96.9 11
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c4iogD_
96.6 17
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
8c3gvmA_
96.5 13
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_
95.9 20
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
95.3 15
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11d1wa8b1
71.5 18
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
12c2vsnB_
70.2 10
PDB header:transferase
Chain: B: PDB Molecule:xcogt;
PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation
13c4lwsA_
70.0 20
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
14c4i0xA_
68.2 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c4lwsB_
58.2 9
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
16c3jywF_
57.0 48
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7(a);
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
17c3pe3D_
56.0 14
PDB header:transferase
Chain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n-
PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate
18c2kg7B_
46.7 20
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
19d1ui5a2
45.8 16
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
20c4jzaB_
40.3 38
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a legionella phosphoinositide phosphatase:2 insights into lipid metabolism in pathogen host interaction
21c3ahrA_
not modelled 31.8 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:ero1-like protein alpha;
PDBTitle: inactive human ero1
22d3cx5d1
not modelled 31.5 40
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Cytochrome bc1 domain
23d1ppjd1
not modelled 31.0 35
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Cytochrome bc1 domain
24c5djsA_
not modelled 30.5 17
PDB header:transferase
Chain: A: PDB Molecule:tetratricopeptide tpr_2 repeat protein;
PDBTitle: thermobaculum terrenum o-glcnac transferase mutant - k341m
25d1rp4a_
not modelled 30.0 23
Fold:ERO1-like
Superfamily:ERO1-like
Family:ERO1-like
26c4lrvL_
not modelled 28.1 40
PDB header:dna binding protein
Chain: L: PDB Molecule:dna sulfur modification protein dnde;
PDBTitle: crystal structure of dnde from escherichia coli b7a involved in dna2 phosphorothioation modification
27c3lhoA_
not modelled 28.0 44
PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of putative hydrolase (yp_751971.1) from shewanella2 frigidimarina ncimb 400 at 1.80 a resolution
28c1zrtD_
not modelled 25.3 50
PDB header:oxidoreductase/metal transport
Chain: D: PDB Molecule:cytochrome c1;
PDBTitle: rhodobacter capsulatus cytochrome bc1 complex with2 stigmatellin bound
29c3fpjA_
not modelled 25.0 11
PDB header:biosynthetic protein, transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of e81q mutant of mtnas in complex with s-2 adenosylmethionine
30c5frgA_
not modelled 24.3 75
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
31c1qcrD_
not modelled 23.7 35
PDB header:oxidoreductase
Chain: D: PDB Molecule:ubiquinol cytochrome c oxidoreductase;
PDBTitle: crystal structure of bovine mitochondrial cytochrome bc12 complex, alpha carbon atoms only
32c3cwbQ_
not modelled 23.6 33
PDB header:oxidoreductase
Chain: Q: PDB Molecule:mitochondrial cytochrome c1, heme protein;
PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d
33c4nl6C_
not modelled 22.8 71
PDB header:splicing
Chain: C: PDB Molecule:survival motor neuron protein;
PDBTitle: structure of the full-length form of the protein smn found in healthy2 patients
34d1byra_
not modelled 22.4 22
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Nuclease
35c1bkvA_
not modelled 22.3 50
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
36c3b5oA_
not modelled 21.8 38
PDB header:oxidoreductase
Chain: A: PDB Molecule:cadd-like protein of unknown function;
PDBTitle: crystal structure of a cadd-like protein of unknown function2 (npun_f6505) from nostoc punctiforme pcc 73102 at 1.35 a resolution
37c4urjA_
not modelled 21.0 13
PDB header:unknown function
Chain: A: PDB Molecule:protein fam83a;
PDBTitle: crystal structure of human bj-tsa-9
38c1bkvB_
not modelled 21.0 50
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
39c1bkvC_
not modelled 21.0 50
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
40c2yiuE_
not modelled 21.0 44
PDB header:oxidoreductase
Chain: E: PDB Molecule:cytochrome c1, heme protein;
PDBTitle: x-ray structure of the dimeric cytochrome bc1 complex from2 the soil bacterium paracoccus denitrificans at 2.73 angstrom resolution
41c5lzkB_
not modelled 20.7 6
PDB header:structural genomics
Chain: B: PDB Molecule:protein fam83b;
PDBTitle: structure of the domain of unknown function duf1669 from human fam83b
42c3kb4D_
not modelled 20.3 14
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:alr8543 protein;
PDBTitle: crystal structure of the alr8543 protein in complex with2 geranylgeranyl monophosphate and magnesium ion from nostoc sp. pcc3 7120, northeast structural genomics consortium target nsr141
43d1luaa2
not modelled 20.0 41
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Methylene-tetrahydromethanopterin dehydrogenase
44c2fynH_
not modelled 19.9 40
PDB header:oxidoreductase
Chain: H: PDB Molecule:cytochrome c1;
PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex
45c1p84D_
not modelled 19.4 40
PDB header:oxidoreductase
Chain: D: PDB Molecule:cytochrome c1, heme protein;
PDBTitle: hdbt inhibited yeast cytochrome bc1 complex
46c6ghrF_
not modelled 18.0 53
PDB header:photosynthesis
Chain: F: PDB Molecule:cp12 polypeptide;
PDBTitle: cyanobacterial gapdh with full-length cp12
47c2pheC_
not modelled 17.5 31
PDB header:transcription
Chain: C: PDB Molecule:alpha trans-inducing protein;
PDBTitle: model for vp16 binding to pc4
48c3q3hA_
not modelled 16.4 13
PDB header:transferase
Chain: A: PDB Molecule:hmw1c-like glycosyltransferase;
PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc
49c2ke4A_
not modelled 15.8 75
PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
50d2a15a1
not modelled 15.0 22
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
51c5e8jC_
not modelled 14.2 43
PDB header:translation
Chain: C: PDB Molecule:rnmt-activating mini protein;
PDBTitle: crystal structure of mrna cap guanine-n7 methyltransferase in complex2 with ram
52c3k66A_
not modelled 13.6 28
PDB header:cell adhesion
Chain: A: PDB Molecule:beta-amyloid-like protein;
PDBTitle: x-ray crystal structure of the e2 domain of c. elegans apl-1
53d1xkna_
not modelled 13.4 21
Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Porphyromonas-type peptidylarginine deiminase
54c2k2uB_
not modelled 13.2 33
PDB header:transcription
Chain: B: PDB Molecule:alpha trans-inducing protein;
PDBTitle: nmr structure of the complex between tfb1 subunit of tfiih2 and the activation domain of vp16
55c4rqoB_
not modelled 12.8 32
PDB header:lyase
Chain: B: PDB Molecule:l-serine dehydratase;
PDBTitle: crystal structure of l-serine dehydratase from legionella pneumophila
56c5jn6A_
not modelled 12.7 56
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the nmr solution structure of rpa3313
57d1yymg1
not modelled 12.7 31
Fold:gp120 core
Superfamily:gp120 core
Family:gp120 core
58d2gxfa1
not modelled 12.6 12
Fold:Cystatin-like
Superfamily:NTF2-like
Family:YybH-like
59c5muuI_
not modelled 12.5 37
PDB header:virus
Chain: I: PDB Molecule:major outer capsid protein;
PDBTitle: dsrna bacteriophage phi6 nucleocapsid
60c2yikA_
not modelled 12.4 10
PDB header:hydrolase
Chain: A: PDB Molecule:endoglucanase;
PDBTitle: catalytic domain of clostridium thermocellum celt
61c4grdA_
not modelled 12.4 18
PDB header:lyase,isomerase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit;
PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase2 catalytic subunit from burkholderia cenocepacia j2315
62d2nxya1
not modelled 12.0 31
Fold:gp120 core
Superfamily:gp120 core
Family:gp120 core
63c3rjqA_
not modelled 11.9 31
PDB header:viral protein/immune system
Chain: A: PDB Molecule:c186 gp120;
PDBTitle: crystal structure of anti-hiv llama vhh antibody a12 in complex with2 c186 gp120
64c5tszA_
not modelled 11.9 22
PDB header:cell invasion
Chain: A: PDB Molecule:pv cell-traversal protein;
PDBTitle: crystal structure of plasmodium vivax celtos
65c2zcaB_
not modelled 11.1 21
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative uncharacterized protein tthb189;
PDBTitle: crystal structure of tthb189, a crispr-associated protein,2 cse2 family from thermus thermophilus hb8
66d1g03a_
not modelled 10.8 28
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
67d2fr1a1
not modelled 10.7 18
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
68c2kwuA_
not modelled 10.7 38
PDB header:protein binding/signaling protein
Chain: A: PDB Molecule:dna polymerase iota;
PDBTitle: solution structure of ubm2 of murine polymerase iota in complex with2 ubiquitin
69d3cu3a1
not modelled 10.4 20
Fold:Cystatin-like
Superfamily:NTF2-like
Family:BaiE/LinA-like
70c5cgaC_
not modelled 10.3 31
PDB header:transferase
Chain: C: PDB Molecule:hydroxyethylthiazole kinase;
PDBTitle: structure of hydroxyethylthiazole kinase thim from staphylococcus2 aureus in complex with substrate analog 2-(1,3,5-trimethyl-1h-3 pyrazole-4-yl)ethanol
71c3jwdA_
not modelled 10.2 31
PDB header:viral protein
Chain: A: PDB Molecule:hiv-1 gp120 envelope glycoprotein;
PDBTitle: structure of hiv-1 gp120 with gp41-interactive region: layered2 architecture and basis of conformational mobility
72c6cboB_
not modelled 10.1 16
PDB header:transferase
Chain: B: PDB Molecule:c-6' aminotransferase;
PDBTitle: x-ray structure of genb1 from micromonospora echinospora in complex2 with neamine and plp (as the external aldimine)
73d2b4cg1
not modelled 10.0 31
Fold:gp120 core
Superfamily:gp120 core
Family:gp120 core
74c1fqvK_
not modelled 10.0 30
PDB header:ligase
Chain: K: PDB Molecule:skp2;
PDBTitle: insights into scf ubiquitin ligases from the structure of2 the skp1-skp2 complex
75c3pf6C_
not modelled 9.9 50
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:hypothetical protein pp-luz7_gp033;
PDBTitle: the structure of uncharacterized protein pp-luz7_gp033 from2 pseudomonas phage luz7.
76c5aizA_
not modelled 9.8 15
PDB header:zinc-binding protein
Chain: A: PDB Molecule:zinc finger miz domain-containing protein 1;
PDBTitle: the pias-like coactivator zmiz1 is a direct and selective cofactor2 of notch1 in t-cell development and leukemia
77c6o9l6_
not modelled 9.7 40
PDB header:transcription/dna
Chain: 6: PDB Molecule:general transcription factor iih subunit 2;
PDBTitle: human holo-pic in the closed state
78c3bkhA_
not modelled 9.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:lytic transglycosylase;
PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144
79c3j5mI_
not modelled 9.5 31
PDB header:viral protein/immune system
Chain: I: PDB Molecule:bg505 sosip gp120;
PDBTitle: cryo-em structure of the bg505 sosip.664 hiv-1 env trimer with 3 pgv042 fabs
80c5i4rA_
not modelled 9.5 43
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:contact-dependent inhibitor a;
PDBTitle: contact-dependent inhibition system from escherichia coli nc101 -2 ternary cdia/cdii/ef-tu complex (trypsin-modified)
81c3r8rJ_
not modelled 9.4 11
PDB header:transferase
Chain: J: PDB Molecule:transaldolase;
PDBTitle: transaldolase from bacillus subtilis
82d1b93a_
not modelled 9.4 29
Fold:Methylglyoxal synthase-like
Superfamily:Methylglyoxal synthase-like
Family:Methylglyoxal synthase, MgsA
83c2phgB_
not modelled 9.4 31
PDB header:transcription
Chain: B: PDB Molecule:alpha trans-inducing protein;
PDBTitle: model for vp16 binding to tfiib
84c3ngbI_
not modelled 9.3 38
PDB header:viral protein/immune system
Chain: I: PDB Molecule:envelope glycoprotein gp160;
PDBTitle: crystal structure of broadly and potently neutralizing antibody vrc012 in complex with hiv-1 gp120
85c4ph2A_
not modelled 9.3 39
PDB header:viral protein
Chain: A: PDB Molecule:blv capsid - n-terminal domain;
PDBTitle: mature n-terminal domain of capsid protein from bovine leukemia virus
86d1jpdx2
not modelled 9.3 21
Fold:Enolase N-terminal domain-like
Superfamily:Enolase N-terminal domain-like
Family:Enolase N-terminal domain-like
87c5te4G_
not modelled 9.1 31
PDB header:immune system
Chain: G: PDB Molecule:hiv-1 clade g strain x2088 gp120;
PDBTitle: crystal structure of broadly neutralizing vrc01-class antibody n6 in2 complex with hiv-1 clade g strain x2088 gp120 core
88c2bn5B_
not modelled 9.1 75
PDB header:nuclear protein
Chain: B: PDB Molecule:u1 small nuclear ribonucleoprotein 70 kda;
PDBTitle: p-element somatic inhibitor protein complex with u1-70k2 proline-rich peptide
89c4xb6D_
not modelled 8.9 18
PDB header:transferase
Chain: D: PDB Molecule:alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase;
PDBTitle: structure of the e. coli c-p lyase core complex
90c4l7zC_
not modelled 8.8 11
PDB header:lyase
Chain: C: PDB Molecule:hpch/hpai aldolase;
PDBTitle: crystal structure of chloroflexus aurantiacus malyl-coa lyase
91c3hx8A_
not modelled 8.8 21
PDB header:isomerase
Chain: A: PDB Molecule:putative ketosteroid isomerase;
PDBTitle: crystal structure of putative ketosteroid isomerase (np_103587.1) from2 mesorhizobium loti at 1.45 a resolution
92d1vpxa_
not modelled 8.8 8
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
93c1ga2A_
not modelled 8.8 16
PDB header:hydrolase
Chain: A: PDB Molecule:endoglucanase 9g;
PDBTitle: the crystal structure of endoglucanase 9g from clostridium2 cellulolyticum complexed with cellobiose
94d1vefa1
not modelled 8.7 24
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
95c3wa8B_
not modelled 8.7 15
PDB header:rna binding protein
Chain: B: PDB Molecule:crispr-associated protein, cse2 family;
PDBTitle: crystal structure of m. ruber casb
96c3rhtB_
not modelled 8.7 30
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:(gatase1)-like protein;
PDBTitle: crystal structure of type 1 glutamine amidotransferase (gatase1)-like2 protein from planctomyces limnophilus
97c3r5zB_
not modelled 8.7 17
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent reductase from nocardia2 farcinica, with co-factor f420
98c5evyX_
not modelled 8.6 16
PDB header:oxidoreductase
Chain: X: PDB Molecule:salicylate hydroxylase;
PDBTitle: salicylate hydroxylase substrate complex
99c2kg7A_
not modelled 8.6 35
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288

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