Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1771_(-)_2005168_2006454
DateFri Aug 2 13:30:38 BST 2019
Unique Job ID417d5d492b981755
SequenceMSPIWSNWPG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:53.618 Y:51.962 Z:71.622
Model (left) based on template c2vfvA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:xylitol oxidase;
PDBTitle: alditol oxidase from streptomyces coelicolor a3(2): complex2 with sulphite
Confidence and coverage
Confidence:100.0% Coverage: 95%
408 residues ( 95% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2vfvA_
100.0 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:xylitol oxidase;
PDBTitle: alditol oxidase from streptomyces coelicolor a3(2): complex2 with sulphite
2c4fdoA_
100.0 20
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: A: PDB Molecule:oxidoreductase dpre1;
PDBTitle: mycobacterium tuberculosis dpre1 in complex with ct319
3c1i19B_
100.0 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:cholesterol oxidase;
PDBTitle: crystal structure of cholesterol oxidase from b.sterolicum
4c3js8A_
100.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:cholesterol oxidase;
PDBTitle: solvent-stable cholesterol oxidase
5c4bc9C_
100.0 16
PDB header:transferase
Chain: C: PDB Molecule:alkyldihydroxyacetonephosphate synthase, peroxisomal;
PDBTitle: mammalian alkyldihydroxyacetonephosphate synthase: wild-type, adduct2 with cyanoethyl
6c4ml8C_
100.0 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:cytokinin oxidase 2;
PDBTitle: structure of maize cytokinin oxidase/dehydrogenase 2 (zmcko2)
7c6c80B_
100.0 17
PDB header:immune system
Chain: B: PDB Molecule:cytokinin oxidase luckx1.1;
PDBTitle: crystal structure of a flax cytokinin oxidase
8c3pm9A_
100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of a putative dehydrogenase (rpa1076) from2 rhodopseudomonas palustris cga009 at 2.57 a resolution
9c3w8wA_
100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative fad-dependent oxygenase encm;
PDBTitle: the crystal structure of encm
10c4oalB_
100.0 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytokinin dehydrogenase 4;
PDBTitle: crystal structure of maize cytokinin oxidase/dehydrogenase 4 (zmcko4)2 in complex with phenylurea inhibitor cppu in alternative spacegroup
11c6f74B_
100.0 10
PDB header:flavoprotein
Chain: B: PDB Molecule:alcohol oxidase;
PDBTitle: crystal structure of vao-type flavoprotein mtvao713 from2 myceliophthora thermophila c1
12c3bw7A_
100.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytokinin dehydrogenase 1;
PDBTitle: maize cytokinin oxidase/dehydrogenase complexed with the allenic2 cytokinin analog ha-1
13c6f73B_
100.0 16
PDB header:flavoprotein
Chain: B: PDB Molecule:mtvao615;
PDBTitle: crystal structure of vao-type flavoprotein mtvao615 at ph 5.0 from2 myceliophthora thermophila c1
14c2bvfA_
100.0 17
PDB header:oxidase
Chain: A: PDB Molecule:6-hydroxy-d-nicotine oxidase;
PDBTitle: crystal structure of 6-hydoxy-d-nicotine oxidase from2 arthrobacter nicotinovorans. crystal form 3 (p1)
15c3vteA_
100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:tetrahydrocannabinolic acid synthase;
PDBTitle: crystal structure of tetrahydrocannabinolic acid synthase from2 cannabis sativa
16c4ud8B_
100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:fad-binding and bbe domain-containing protein;
PDBTitle: atbbe15
17c2exrA_
100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytokinin dehydrogenase 7;
PDBTitle: x-ray structure of cytokinin oxidase/dehydrogenase (ckx) from2 arabidopsis thaliana at5g21482
18c5l6fA_
100.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:fad linked oxidase-like protein;
PDBTitle: xylooligosaccharide oxidase from myceliophthora thermophila c1 in2 complex with xylobiose
19c5d79B_
100.0 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:berberine bridge enzyme-like protein;
PDBTitle: structure of bbe-like #28 from arabidopsis thaliana
20c6eo5A_
100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:ppbbe-like 1 d396n;
PDBTitle: physcomitrella patens bbe-like 1 variant d396n
21c1wveB_
not modelled 100.0 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:4-cresol dehydrogenase [hydroxylating]
PDBTitle: p-cresol methylhydroxylase: alteration of the structure of2 the flavoprotein subunit upon its binding to the3 cytochrome subunit
22c3rjaA_
not modelled 100.0 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:carbohydrate oxidase;
PDBTitle: crystal structure of carbohydrate oxidase from microdochium nivale in2 complex with substrate analogue
23c1zr6A_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:glucooligosaccharide oxidase;
PDBTitle: the crystal structure of an acremonium strictum glucooligosaccharide2 oxidase reveals a novel flavinylation
24c3popD_
not modelled 100.0 11
PDB header:oxidoreductase
Chain: D: PDB Molecule:gilr oxidase;
PDBTitle: the crystal structure of gilr, an oxidoreductase that catalyzes the2 terminal step of gilvocarcin biosynthesis
25c3tsjA_
not modelled 100.0 12
PDB header:allergen, oxidoreductase
Chain: A: PDB Molecule:pollen allergen phl p 4;
PDBTitle: crystal structure of phl p 4, a grass pollen allergen with glucose2 dehydrogenase activity
26c2ipiD_
not modelled 100.0 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:aclacinomycin oxidoreductase (aknox);
PDBTitle: crystal structure of aclacinomycin oxidoreductase
27c3fwaA_
not modelled 100.0 17
PDB header:flavoprotein
Chain: A: PDB Molecule:reticuline oxidase;
PDBTitle: structure of berberine bridge enzyme, c166a variant in complex with2 (s)-reticuline
28c3d2hA_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:berberine bridge-forming enzyme;
PDBTitle: structure of berberine bridge enzyme from eschscholzia californica,2 monoclinic crystal form
29c2y3rC_
not modelled 100.0 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:taml;
PDBTitle: structure of the tirandamycin-bound fad-dependent tirandamycin oxidase2 taml in p21 space group
30c2wdwB_
not modelled 100.0 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative hexose oxidase;
PDBTitle: the native crystal structure of the primary hexose oxidase (2 dbv29) in antibiotic a40926 biosynthesis
31c5i1wD_
not modelled 100.0 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:crmk;
PDBTitle: crystal structure of crmk, a flavoenzyme involved in the shunt product2 recycling mechanism in caerulomycin biosynthesis
32c5fxpA_
not modelled 100.0 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:eugenol oxidase;
PDBTitle: crystal structure of eugenol oxidase in complex with2 vanillin
33c2uuvC_
not modelled 100.0 15
PDB header:transferase
Chain: C: PDB Molecule:alkyldihydroxyacetonephosphate synthase;
PDBTitle: alkyldihydroxyacetonephosphate synthase in p1
34c1ahuB_
not modelled 100.0 13
PDB header:flavoenzyme
Chain: B: PDB Molecule:vanillyl-alcohol oxidase;
PDBTitle: structure of the octameric flavoenzyme vanillyl-alcohol2 oxidase in complex with p-cresol
35c1f0xA_
not modelled 100.0 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-lactate dehydrogenase;
PDBTitle: crystal structure of d-lactate dehydrogenase, a peripheral membrane2 respiratory enzyme.
36d2i0ka2
not modelled 100.0 25
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
37d1wvfa2
not modelled 100.0 16
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
38d1w1oa2
not modelled 100.0 21
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
39d1e8ga2
not modelled 100.0 20
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
40d1f0xa2
not modelled 100.0 18
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:FAD-linked oxidases, N-terminal domain
41d1uxya1
not modelled 100.0 16
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
42d1hska1
not modelled 100.0 18
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
43c4pytA_
not modelled 100.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: crystal structure of a murb family ep-udp-n-acetylglucosamine2 reductase
44c1hskA_
not modelled 100.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: crystal structure of s. aureus murb
45c4jayC_
not modelled 100.0 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: crystal structure of p. aeruginosa murb in complex with nadp+
46c1mbbA_
not modelled 100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:uridine diphospho-n-acetylenolpyruvylglucosamine
PDBTitle: oxidoreductase
47c3i99A_
not modelled 99.9 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: the crystal structure of the udp-n-acetylenolpyruvoylglucosamine2 reductase from the vibrio cholerae o1 biovar tor
48c5jzxB_
not modelled 99.9 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase;
PDBTitle: crystal structure of udp-n-acetylenolpyruvoylglucosamine reductase2 (murb) from mycobacterium tuberculosis
49c2yvsA_
not modelled 99.9 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:glycolate oxidase subunit glce;
PDBTitle: crystal structure of glycolate oxidase subunit glce from thermus2 thermophilus hb8
50d2i0ka1
not modelled 99.9 18
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:Cholesterol oxidase
51c2gquA_
not modelled 99.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:udp-n-acetylenolpyruvylglucosamine reductase;
PDBTitle: crystal structure of udp-n-acetylenolpyruvylglucosamine2 reductase (murb) from thermus caldophilus
52d1w1oa1
not modelled 99.0 11
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:Cytokinin dehydrogenase 1
53d1e8ga1
not modelled 98.4 9
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:Vanillyl-alcohol oxidase-like
54d1f0xa1
not modelled 98.2 10
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:D-lactate dehydrogenase
55d1wvfa1
not modelled 98.2 8
Fold:Ferredoxin-like
Superfamily:FAD-linked oxidases, C-terminal domain
Family:Vanillyl-alcohol oxidase-like
56d1ffvc2
not modelled 97.7 16
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
57c5y6qB_
not modelled 97.6 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:aldehyde oxidase medium subunit;
PDBTitle: crystal structure of an aldehyde oxidase from methylobacillus sp.2 ky4400
58c5g5hB_
not modelled 97.6 20
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative xanthine dehydrogenase yags fad-binding subunit;
PDBTitle: escherichia coli periplasmic aldehyde oxidase r440h mutant
59d1v97a6
not modelled 97.5 12
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
60d3b9jb2
not modelled 97.4 13
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
61d1n62c2
not modelled 97.4 19
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
62c1ffuF_
not modelled 97.3 17
PDB header:hydrolase
Chain: F: PDB Molecule:cutm, flavoprotein of carbon monoxide
PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava which lacks the mo-pyranopterin moiety of the3 molybdenum cofactor
63c1n62C_
not modelled 97.3 20
PDB header:oxidoreductase
Chain: C: PDB Molecule:carbon monoxide dehydrogenase medium chain;
PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state
64c1t3qF_
not modelled 97.3 20
PDB header:oxidoreductase
Chain: F: PDB Molecule:quinoline 2-oxidoreductase medium subunit;
PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86
65c3etrM_
not modelled 96.9 13
PDB header:oxidoreductase
Chain: M: PDB Molecule:xanthine dehydrogenase/oxidase;
PDBTitle: crystal structure of xanthine oxidase in complex with lumazine
66c1rm6E_
not modelled 96.8 16
PDB header:oxidoreductase
Chain: E: PDB Molecule:4-hydroxybenzoyl-coa reductase beta subunit;
PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica
67c3b9jJ_
not modelled 96.8 13
PDB header:oxidoreductase
Chain: J: PDB Molecule:xanthine oxidase;
PDBTitle: structure of xanthine oxidase with 2-hydroxy-6-methylpurine
68d1t3qc2
not modelled 96.8 18
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
69c3hrdC_
not modelled 96.6 11
PDB header:oxidoreductase
Chain: C: PDB Molecule:nicotinate dehydrogenase fad-subunit;
PDBTitle: crystal structure of nicotinate dehydrogenase
70c4zohB_
not modelled 96.1 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase fad-binding subunit;
PDBTitle: crystal structure of glyceraldehyde oxidoreductase
71c1wygA_
not modelled 95.6 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase;
PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s)
72d1jroa4
not modelled 95.6 12
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
73c2w3rG_
not modelled 95.6 16
PDB header:oxidoreductase
Chain: G: PDB Molecule:xanthine dehydrogenase;
PDBTitle: crystal structure of xanthine dehydrogenase (desulfo form)2 from rhodobacter capsulatus in complex with hypoxanthine
74d1rm6b2
not modelled 95.1 19
Fold:FAD-binding/transporter-associated domain-like
Superfamily:FAD-binding/transporter-associated domain-like
Family:CO dehydrogenase flavoprotein N-terminal domain-like
75c4uhxA_
not modelled 93.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidase;
PDBTitle: human aldehyde oxidase in complex with phthalazine and thioridazine
76c2uvaI_
not modelled 91.2 31
PDB header:transferase
Chain: I: PDB Molecule:fatty acid synthase beta subunits;
PDBTitle: crystal structure of fatty acid synthase from thermomyces2 lanuginosus at 3.1 angstrom resolution. this file contains3 the beta subunits of the fatty acid synthase. the entire4 crystal structure consists of one heterododecameric fatty5 acid synthase and is described in remark 400
77c2vkzH_
not modelled 89.6 31
PDB header:transferase
Chain: H: PDB Molecule:fatty acid synthase subunit beta;
PDBTitle: structure of the cerulenin-inhibited fungal fatty acid synthase type i2 multienzyme complex
78c3zyvA_
not modelled 88.9 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:aox3;
PDBTitle: crystal structure of the mouse liver aldehyde oxidase 3 (maox3)
79c4b3yB_
not modelled 86.3 28
PDB header:transferase
Chain: B: PDB Molecule:fatty acid synthase;
PDBTitle: cryo-em structure of the mycobacterial fatty acid synthase
80d1kx9b_
not modelled 61.2 17
Fold:alpha-alpha superhelix
Superfamily:Chemosensory protein Csp2
Family:Chemosensory protein Csp2
81d1jaka1
not modelled 61.1 29
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
82c3komB_
not modelled 60.9 11
PDB header:transferase
Chain: B: PDB Molecule:transketolase;
PDBTitle: crystal structure of apo transketolase from francisella tularensis
83c2gvsA_
not modelled 60.9 29
PDB header:lipid binding protein
Chain: A: PDB Molecule:chemosensory protein csp-sg4;
PDBTitle: nmr solution structure of cspsg4
84d1n8va_
not modelled 60.8 17
Fold:alpha-alpha superhelix
Superfamily:Chemosensory protein Csp2
Family:Chemosensory protein Csp2
85d1yhta1
not modelled 58.7 29
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
86c6je8A_
not modelled 58.2 33
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: crystal structure of a beta-n-acetylhexosaminidase
87c5oarB_
not modelled 57.2 29
PDB header:hydrolase
Chain: B: PDB Molecule:beta-hexosaminidase;
PDBTitle: crystal structure of native beta-n-acetylhexosaminidase isolated from2 aspergillus oryzae
88c4h04B_
not modelled 54.8 14
PDB header:hydrolase
Chain: B: PDB Molecule:lacto-n-biosidase;
PDBTitle: lacto-n-biosidase from bifidobacterium bifidum
89c3gh7A_
not modelled 54.2 24
PDB header:hydrolase
Chain: A: PDB Molecule:beta-hexosaminidase;
PDBTitle: crystal structure of beta-hexosaminidase from paenibacillus sp. ts122 in complex with galnac
90c3nsnA_
not modelled 53.3 29
PDB header:hydrolase
Chain: A: PDB Molecule:n-acetylglucosaminidase;
PDBTitle: crystal structure of insect beta-n-acetyl-d-hexosaminidase ofhex12 complexed with tmg-chitotriomycin
91d1qbaa3
not modelled 52.7 29
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
92c2yl8A_
not modelled 52.3 24
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
93c2ylaA_
not modelled 51.6 19
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis
94d2gjxa1
not modelled 50.9 38
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
95d1nowa1
not modelled 50.7 33
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-N-acetylhexosaminidase catalytic domain
96c1nouA_
not modelled 49.9 33
PDB header:hydrolase
Chain: A: PDB Molecule:beta-hexosaminidase beta chain;
PDBTitle: native human lysosomal beta-hexosaminidase isoform b
97c1m04A_
not modelled 49.2 29
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: mutant streptomyces plicatus beta-hexosaminidase (d313n) in complex2 with product (glcnac)
98c6ezrA_
not modelled 48.1 38
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylglucosaminidase nag2;
PDBTitle: crystal structure of gh20 exo beta-n-acetylglucosaminidase from vibrio2 harveyi
99c2gjxE_
not modelled 47.9 38
PDB header:hydrolase
Chain: E: PDB Molecule:beta-hexosaminidase alpha chain;
PDBTitle: crystallographic structure of human beta-hexosaminidase a
100c3rcnA_
not modelled 46.3 29
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: crystal structure of beta-n-acetylhexosaminidase from arthrobacter2 aurescens
101c3lmyA_
not modelled 45.7 33
PDB header:hydrolase
Chain: A: PDB Molecule:beta-hexosaminidase subunit beta;
PDBTitle: the crystal structure of beta-hexosaminidase b in complex with2 pyrimethamine
102c3rpmA_
not modelled 44.8 24
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetyl-hexosaminidase;
PDBTitle: crystal structure of the first gh20 domain of a novel beta-n-acetyl-2 hexosaminidase strh from streptococcus pneumoniae r6
103c4pysB_
not modelled 41.3 38
PDB header:hydrolase
Chain: B: PDB Molecule:beta-n-acetylhexosaminidase;
PDBTitle: the crystal structure of beta-n-acetylhexosaminidase from bacteroides2 fragilis nctc 9343
104c2bp7F_
not modelled 40.3 8
PDB header:oxidoreductase
Chain: F: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit;
PDBTitle: new crystal form of the pseudomonas putida branched-chain2 dehydrogenase (e1)
105c1qbaA_
not modelled 36.2 29
PDB header:glycosyl hydrolase
Chain: A: PDB Molecule:chitobiase;
PDBTitle: bacterial chitobiase, glycosyl hydrolase family 20
106c3m7iA_
not modelled 35.2 12
PDB header:transferase
Chain: A: PDB Molecule:transketolase;
PDBTitle: crystal structure of transketolase in complex with thiamine2 diphosphate, ribose-5-phosphate(pyranose form) and magnesium ion
107c3zihB_
not modelled 33.2 16
PDB header:cell cycle
Chain: B: PDB Molecule:cell division protein sepf;
PDBTitle: bacillus subtilis sepf, c-terminal domain
108d1qupa2
not modelled 33.0 14
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
109d1umdb1
not modelled 31.4 11
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
110c2epoB_
not modelled 31.4 24
PDB header:hydrolase
Chain: B: PDB Molecule:n-acetyl-beta-d-glucosaminidase;
PDBTitle: n-acetyl-b-d-glucosaminidase (gcna) from streptococcus gordonii
111c1um9D_
not modelled 30.6 9
PDB header:oxidoreductase
Chain: D: PDB Molecule:2-oxo acid dehydrogenase beta subunit;
PDBTitle: branched-chain 2-oxo acid dehydrogenase (e1) from thermus2 thermophilus hb8 in apo-form
112c1qupA_
not modelled 29.4 8
PDB header:chaperone
Chain: A: PDB Molecule:superoxide dismutase 1 copper chaperone;
PDBTitle: crystal structure of the copper chaperone for superoxide dismutase
113c5fkvA_
not modelled 29.3 29
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase iii subunit alpha;
PDBTitle: cryo-em structure of the e. coli replicative dna polymerase complex2 bound to dna (dna polymerase iii alpha, beta, epsilon, tau complex)
114d1ik6a1
not modelled 29.3 15
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
115c1ik6A_
not modelled 28.6 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:pyruvate dehydrogenase;
PDBTitle: 3d structure of the e1beta subunit of pyruvate2 dehydrogenase from the archeon pyrobaculum aerophilum
116d1poib_
not modelled 27.6 25
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:CoA transferase beta subunit-like
117d1w85b1
not modelled 26.4 15
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
118c6a8mA_
not modelled 26.0 7
PDB header:dna binding protein
Chain: A: PDB Molecule:fact complex subunit spt16;
PDBTitle: n-terminal domain of fact complex subunit spt16 from eremothecium2 gossypii (ashbya gossypii)
119d2ozlb1
not modelled 25.8 19
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Branched-chain alpha-keto acid dehydrogenase Pyr module
120c2hnhA_
not modelled 25.7 29
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase iii alpha subunit;
PDBTitle: crystal structure of the catalytic alpha subunit of e. coli2 replicative dna polymerase iii

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below