Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1780_(-)_2014706_2015269
DateFri Aug 2 13:30:39 BST 2019
Unique Job IDbc6d939a823ac754
SequenceMQNHDYVTYE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:25.361 Y:22.081 Z:31.282
Model (left) based on template c5mwwA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: sigma1.1 domain of sigmaa from bacillus subtilis
Confidence and coverage
Confidence: 39.3% Coverage: 19%
35 residues ( 19% of your sequence) have been modelled with 39.3% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5mwwA_



39.3 17
PDB header:transferase
Chain: A: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: sigma1.1 domain of sigmaa from bacillus subtilis
2c2v3sB_



36.8 21
PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase osr1;
PDBTitle: structural insights into the recognition of substrates and2 activators by the osr1 kinase
3d1zmba1



32.7 33
Fold:Flavodoxin-like
Superfamily:SGNH hydrolase
Family:Putative acetylxylan esterase-like
4c2k6xA_



22.2 14
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
5c2idcA_



15.7 14
PDB header:replication/chaperone
Chain: A: PDB Molecule:anti-silencing protein 1 and histone h3 chimera;
PDBTitle: structure of the histone h3-asf1 chaperone interaction
6c6a6yA_



15.4 19
PDB header:chaperone
Chain: A: PDB Molecule:histone chaperone asf1, putative;
PDBTitle: crystal structure of asf1 from plasmodium falciparum
7d2i32a1



15.1 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ASF1-like
Family:ASF1-like
8c2i32A_



15.1 14
PDB header:replication chaperone
Chain: A: PDB Molecule:anti-silencing factor 1 paralog a;
PDBTitle: structure of a human asf1a-hira complex and insights into specificity2 of histone chaperone complex assembly
9d1roca_



14.5 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ASF1-like
Family:ASF1-like
10c3zpmA_



13.6 18
PDB header:surfactant protein
Chain: A: PDB Molecule:latherin;
PDBTitle: solution structure of latherin
11c3jb9E_



13.4 45
PDB header:rna binding protein/rna
Chain: E: PDB Molecule:small nuclear ribonucleoprotein-associated protein b;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
12c5fmnB_



11.3 26
PDB header:dna binding protein
Chain: B: PDB Molecule:inrs;
PDBTitle: the nickel-responsive transcriptional regulator inrs
13c3voqA_



10.1 25
PDB header:membrane protein
Chain: A: PDB Molecule:target of rapamycin complex 2 subunit mapkap1;
PDBTitle: crystal structure of the pleckstrin homology domain of human sin1, a2 torc2 subunit
14c5xtdK_



9.9 67
PDB header:oxidoreductase/electron transport
Chain: K: PDB Molecule:nadh dehydrogenase [ubiquinone] flavoprotein 3,
PDBTitle: cryo-em structure of human respiratory complex i
15d1u3ua1



9.6 18
Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
16c5lcyD_



8.2 14
PDB header:transcription
Chain: D: PDB Molecule:frmr;
PDBTitle: formaldehyde-responsive regulator frmr e64h variant from salmonella2 enterica serovar typhimurium
17c5lbmD_



7.4 24
PDB header:transcription
Chain: D: PDB Molecule:transcriptional repressor frmr;
PDBTitle: the asymmetric tetrameric structure of the formaldehyde sensing2 transcriptional repressor frmr from escherichia coli
18c2y69S_



7.3 19
PDB header:electron transport
Chain: S: PDB Molecule:cytochrome c oxidase subunit 5b;
PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular oxygen
19d2dyja1



6.9 19
Fold:Alpha-lytic protease prodomain-like
Superfamily:Ribosome-binding factor A, RbfA
Family:Ribosome-binding factor A, RbfA
20d1u3wa1



6.6 20
Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain
21c2dcuB_



not modelled 6.5 29
PDB header:translation
Chain: B: PDB Molecule:translation initiation factor 2 beta subunit;
PDBTitle: crystal structure of translation initiation factor aif2betagamma2 heterodimer with gdp
22c2lkqA_



not modelled 6.2 50
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
23d2cu9a1



not modelled 6.1 16
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ASF1-like
Family:ASF1-like
24c2fsdB_



not modelled 5.8 35
PDB header:viral protein
Chain: B: PDB Molecule:putative baseplate protein;
PDBTitle: a common fold for the receptor binding domains of2 lactococcal phages? the crystal structure of the head3 domain of phage bil170
25d2b4va2



not modelled 5.6 13
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:RNA editing terminal uridyl transferase 2, RET2, catalytic domain
26d2gu2a1



not modelled 5.4 22
Fold:Phosphorylase/hydrolase-like
Superfamily:Zn-dependent exopeptidases
Family:AstE/AspA-like
27d2jhfa1



not modelled 5.1 20
Fold:GroES-like
Superfamily:GroES-like
Family:Alcohol dehydrogenase-like, N-terminal domain

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