Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1793_(esxN)_2030701_2030985
DateFri Aug 2 13:30:40 BST 2019
Unique Job ID909eb0c0194c3c77
SequenceMTINYQFGDV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.704 Y:39.378 Z:25.299
Model (left) based on template c4gzrA_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein 6;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 (rv2346c-rv2347c) complex in space group c2221
Confidence and coverage
Confidence:100.0% Coverage: 62%
58 residues ( 62% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
92 residues ( 98%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4gzrA_
100.0 97
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein 6;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 (rv2346c-rv2347c) complex in space group c2221
2c3ogiC_
100.0 95
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:putative esat-6-like protein 6;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 complex (rv2346c-rv2347c)
3d1wa8b1
96.4 20
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
4c2kg7B_
96.2 18
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
5d1wa8a1
86.5 12
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
6c3gvmA_
77.2 11
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
7c3zbhC_
77.0 17
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
8c4lwsB_
71.8 18
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
9c4lwsA_
68.3 12
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
10c2vs0B_
67.7 12
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
11c4iogD_
27.8 11
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
12d2bsqe1
22.6 22
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Trafficking protein A-like
13d1zuna1
15.7 31
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PAPS reductase-like
14c2h1oH_
13.8 24
PDB header:gene regulation/dna complex
Chain: H: PDB Molecule:trafficking protein a;
PDBTitle: structure of fitab bound to ir36 dna fragment
15c4p63A_
10.2 22
PDB header:transferase
Chain: A: PDB Molecule:probable deoxyhypusine synthase;
PDBTitle: crystal structure of deoxyhypusine synthase from pyrococcus horikoshii
16c4dwnB_
10.1 32
PDB header:apoptosis
Chain: B: PDB Molecule:bcl10-interacting card protein;
PDBTitle: crystal structure of human bincard card
17c2xuvB_
9.5 100
PDB header:unknown function
Chain: B: PDB Molecule:hdeb;
PDBTitle: the structure of hdeb
18d1q8ia2
9.0 30
Fold:DNA/RNA polymerases
Superfamily:DNA/RNA polymerases
Family:DNA polymerase I
19c2dtuA_
8.9 30
PDB header:transferase/dna
Chain: A: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of the beta hairpin loop deletion variant of rb692 gp43 in complex with dna containing an abasic site analog
20c1nwaA_
8.9 67
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: structure of mycobacterium tuberculosis methionine2 sulfoxide reductase a in complex with protein-bound3 methionine
21d1nwaa_
not modelled 8.9 67
Fold:Ferredoxin-like
Superfamily:Peptide methionine sulfoxide reductase
Family:Peptide methionine sulfoxide reductase
22c4d8mA_
not modelled 8.4 18
PDB header:lipid binding protein
Chain: A: PDB Molecule:pesticidal crystal protein cry5ba;
PDBTitle: crystal structure of bacillus thuringiensis cry5b nematocidal toxin
23c3bqhA_
not modelled 8.3 67
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase msra/msrb;
PDBTitle: structure of the central domain (msra) of neisseria meningitidis pilb2 (oxidized form)
24c2ds2A_
not modelled 8.2 83
PDB header:plant protein
Chain: A: PDB Molecule:sweet protein mabinlin-2 chain a;
PDBTitle: crystal structure of mabinlin ii
25d1ih7a2
not modelled 8.1 30
Fold:DNA/RNA polymerases
Superfamily:DNA/RNA polymerases
Family:DNA polymerase I
26c4xvvB_
not modelled 8.0 80
PDB header:chaperone
Chain: B: PDB Molecule:acid stress chaperone hdeb;
PDBTitle: crystal structure of an acid stress chaperone hdeb (kpn_03484) from2 klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.70 a3 resolution
27c2ds2C_
not modelled 7.9 83
PDB header:plant protein
Chain: C: PDB Molecule:sweet protein mabinlin-2 chain a;
PDBTitle: crystal structure of mabinlin ii
28d1njha_
not modelled 7.8 50
Fold:Hypothetical protein YojF
Superfamily:Hypothetical protein YojF
Family:Hypothetical protein YojF
29d2fyuk1
not modelled 7.7 23
Fold:Single transmembrane helix
Superfamily:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
30c4rs7R_
not modelled 7.5 60
PDB header:dna binding protein
Chain: R: PDB Molecule:parb-c;
PDBTitle: structure of pnob8 parb-c
31c3nzlA_
not modelled 7.1 27
PDB header:transcription
Chain: A: PDB Molecule:dna-binding protein satb1;
PDBTitle: crystal structure of the n-terminal domain of dna-binding protein2 satb1 from homo sapiens, northeast structural genomics consortium3 target hr4435b
32c4hetA_
not modelled 6.9 32
PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical glycoside hydrolase;
PDBTitle: crystal structure of a putative glycoside hydrolase (bt3745) from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution
33d1mq0a_
not modelled 6.9 31
Fold:Cytidine deaminase-like
Superfamily:Cytidine deaminase-like
Family:Cytidine deaminase
34c2j89A_
not modelled 5.8 56
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine sulfoxide reductase a;
PDBTitle: functional and structural aspects of poplar cytosolic and2 plastidial type a methionine sulfoxide reductases
35c1dlcA_
not modelled 5.8 41
PDB header:toxin
Chain: A: PDB Molecule:delta-endotoxin cryiiia;
PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution
36c1w99A_
not modelled 5.6 32
PDB header:toxin
Chain: A: PDB Molecule:pesticidial crystal protein cry4ba;
PDBTitle: mosquito-larvicidal toxin cry4ba from bacillus thuringiensis ssp.2 israelensis
37c5fa9B_
not modelled 5.5 67
PDB header:oxidoreductase
Chain: B: PDB Molecule:peptide methionine sulfoxide reductase msra;
PDBTitle: bifunctional methionine sulfoxide reductase ab (msrab) from treponema2 denticola
38c3pilA_
not modelled 5.5 67
PDB header:oxidoreductase
Chain: A: PDB Molecule:peptide methionine sulfoxide reductase;
PDBTitle: crystal structure of mxr1 from saccharomyces cerevisiae in reduced2 form
39c4itqA_
not modelled 5.5 33
PDB header:gene regulation, structural protein/dna
Chain: A: PDB Molecule:putative uncharacterized protein sco1480;
PDBTitle: crystal structure of hypothetical protein sco1480 bound to dna
40d2fr5a1
not modelled 5.2 25
Fold:Cytidine deaminase-like
Superfamily:Cytidine deaminase-like
Family:Cytidine deaminase
41c3eb7B_
not modelled 5.2 45
PDB header:toxin
Chain: B: PDB Molecule:insecticidal delta-endotoxin cry8ea1;
PDBTitle: crystal structure of insecticidal delta-endotoxin cry8ea1 from2 bacillus thuringiensis at 2.2 angstroms resolution

Binding site prediction 

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