Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1795_(-)_2032247_2033758
DateFri Aug 2 13:30:40 BST 2019
Unique Job IDe2223b27eda7dbc1
SequenceMTAVADAPQA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.870 Y:31.673 Z:26.991
Model (left) based on template c4kv3A_
Top template information
PDB header:protein transport
Chain: A: PDB Molecule:chimera fusion protein of esx-1 secretion system protein
PDBTitle: ubiquitin-like domain of the mycobacterium tuberculosis type vii2 secretion system protein eccd1 as maltose-binding protein fusion
Confidence and coverage
Confidence: 99.4% Coverage: 17%
84 residues ( 17% of your sequence) have been modelled with 99.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4kv3A_
99.4 24
PDB header:protein transport
Chain: A: PDB Molecule:chimera fusion protein of esx-1 secretion system protein
PDBTitle: ubiquitin-like domain of the mycobacterium tuberculosis type vii2 secretion system protein eccd1 as maltose-binding protein fusion
2d1j8ca_
96.7 18
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
3d1yqba1
96.3 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
4c2klcA_
96.2 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ubiquilin-1;
PDBTitle: nmr solution structure of human ubiquitin-like domain of ubiquilin 1,2 northeast structural genomics consortium (nesg) target ht5a
5d1a5ra_
95.6 9
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
6c2kmaA_
95.6 18
PDB header:structural protein
Chain: A: PDB Molecule:talin 1;
PDBTitle: nmr structure of the f0f1 double domain (residues 1-202) of2 the talin ferm domain
7d1wx7a1
95.6 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
8d1bt0a_
95.5 11
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
9c3goeA_
95.4 8
PDB header:recombination, replication
Chain: A: PDB Molecule:dna repair protein rad60;
PDBTitle: molecular mimicry of sumo promotes dna repair
10d1wz0a1
95.3 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
11c4hwiB_
95.3 13
PDB header:chaperone/apoptosis
Chain: B: PDB Molecule:bag family molecular chaperone regulator 1;
PDBTitle: crystal structure of atbag1 in complex with hsp70
12c2dzmA_
95.2 13
PDB header:structural genomics unknown function
Chain: A: PDB Molecule:fas-associated factor 1;
PDBTitle: solution structure of the ubiquitin-like domain in human2 fas-associated factor 1 (hfaf1)
13c1yx5B_
95.1 11
PDB header:hydrolase
Chain: B: PDB Molecule:ubiquitin;
PDBTitle: solution structure of s5a uim-1/ubiquitin complex
14d1wh3a_
95.1 19
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
15c2bpsA_
95.0 20
PDB header:ubiquitin
Chain: A: PDB Molecule:yukd protein;
PDBTitle: ubiquitin-like protein yukd of bacillus subtilis
16c2kzrA_
94.9 11
PDB header:hydrolase
Chain: A: PDB Molecule:ubiquitin thioesterase otu1;
PDBTitle: solution nmr structure of ubiquitin thioesterase otu1 (ec 3.1.2.-)2 from mus musculus, northeast structural genomics consortium target3 mmt2a
17d1v2ya_
94.9 19
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
18d1wgga_
94.9 21
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
19d2bwfa1
94.8 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
20d1wy8a1
94.8 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
21d1z2ma1
not modelled 94.7 18
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
22c5xqmA_
not modelled 94.6 8
PDB header:signaling protein
Chain: A: PDB Molecule:small ubiquitin-related modifier;
PDBTitle: nmr solution structure of smo1, sumo homologue in caenorhabditis2 elegans
23c2mqjA_
not modelled 94.6 19
PDB header:ligase
Chain: A: PDB Molecule:ubiquitin-like protein;
PDBTitle: solution structure of ubiquitin-like protein from caldiarchaeum2 subterraneum
24c5ycaA_
not modelled 94.6 16
PDB header:membrane protein
Chain: A: PDB Molecule:ubiquitin-like protein smt3,bouquet formation protein 4;
PDBTitle: crystal structure of inner membrane protein bqt4 in complex with lem2
25c5jp1B_
not modelled 94.5 17
PDB header:hydrolase
Chain: B: PDB Molecule:small ubiquitin-related modifier;
PDBTitle: structure of xanthomonas campestris effector protein xopd bound to2 tomato sumo
26d1ud7a_
not modelled 94.5 9
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
27d2uyzb1
not modelled 94.5 8
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
28d1v5oa_
not modelled 94.4 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
29c2dziA_
not modelled 94.3 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ubiquitin-like protein 4a;
PDBTitle: 2dzi/solution structure of the n-terminal ubiquitin-like2 domain in human ubiquitin-like protein 4a (gdx)
30d1wx8a1
not modelled 94.2 19
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
31c2kd0A_
not modelled 94.1 27
PDB header:signaling protein
Chain: A: PDB Molecule:lrr repeats and ubiquitin-like domain-containing
PDBTitle: nmr solution structure of o64736 protein from arabidopsis2 thaliana. northeast structural genomics consortium mega3 target ar3445a
32d1ndda_
not modelled 93.9 11
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
33c2dajA_
not modelled 93.9 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:kiaa0977 protein;
PDBTitle: solution structure of the novel identified ubiquitin-like2 domain in the human cobl-like 1 protein
34c2k8hA_
not modelled 93.8 19
PDB header:signaling protein
Chain: A: PDB Molecule:small ubiquitin protein;
PDBTitle: solution structure of sumo from trypanosoma brucei
35d1wm3a_
not modelled 93.8 19
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
36d2zeqa1
not modelled 93.7 12
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
37d2io3b1
not modelled 93.4 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
38c2ekeC_
not modelled 93.4 16
PDB header:ligase/protein binding
Chain: C: PDB Molecule:ubiquitin-like protein smt3;
PDBTitle: structure of a sumo-binding-motif mimic bound to smt3p-2 ubc9p: conservation of a noncovalent ubiquitin-like3 protein-e2 complex as a platform for selective4 interactions within a sumo pathway
39c3m63B_
not modelled 93.3 13
PDB header:ligase/protein binding
Chain: B: PDB Molecule:ubiquitin domain-containing protein dsk2;
PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of dsk2
40d1c3ta_
not modelled 93.0 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
41d1uela_
not modelled 92.8 11
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
42d1euvb_
not modelled 92.7 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
43d1v5ta_
not modelled 92.6 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
44c2kxjA_
not modelled 92.6 8
PDB header:protein binding
Chain: A: PDB Molecule:ubx domain-containing protein 4;
PDBTitle: solution structure of ubx domain of human ubxd2 protein
45c2k25A_
not modelled 92.5 11
PDB header:unknown function
Chain: A: PDB Molecule:ubb;
PDBTitle: automated nmr structure of the ubb by fapsy
46d1sifa_
not modelled 92.5 9
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
47c5y3tA_
not modelled 92.3 16
PDB header:ligase
Chain: A: PDB Molecule:ranbp-type and c3hc4-type zinc finger-containing protein 1;
PDBTitle: crystal structure of hetero-trimeric core of lubac: hoip double-uba2 complexed with hoil-1l ubl and sharpin ubl
48c2mlbA_
not modelled 92.3 10
PDB header:de novo protein
Chain: A: PDB Molecule:redesigned ubiquitin;
PDBTitle: nmr solution structure of a computational designed protein based on2 template of human erythrocytic ubiquitin
49d1zkha1
not modelled 92.2 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
50c2n7dA_
not modelled 92.2 15
PDB header:unknown function
Chain: A: PDB Molecule:protein ddi1 homolog 2;
PDBTitle: solution structure of the ubl domain of human ddi2
51c1ttnA_
not modelled 92.1 12
PDB header:signaling protein
Chain: A: PDB Molecule:dendritic cell-derived ubiquitin-like protein;
PDBTitle: solution structure of the ubiquitin-like domain of human dc-2 ubp from dendritic cells
52d1ttna1
not modelled 92.1 12
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
53c1oqyA_
not modelled 92.1 10
PDB header:replication
Chain: A: PDB Molecule:uv excision repair protein rad23 homolog a;
PDBTitle: structure of the dna repair protein hhr23a
54d2faza1
not modelled 92.0 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
55d1x1ma1
not modelled 92.0 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
56c2kj6A_
not modelled 91.9 14
PDB header:chaperone
Chain: A: PDB Molecule:tubulin folding cofactor b;
PDBTitle: nmr solution structure of a tubulin folding cofactor b2 obtained from arabidopsis thaliana: northeast structural3 genomics consortium target ar3436a
57c2inpE_
not modelled 91.8 23
PDB header:oxidoreductase
Chain: E: PDB Molecule:phenol hydroxylase component pho;
PDBTitle: structure of the phenol hydroxylase-regulatory protein2 complex
58d1we7a_
not modelled 91.4 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
59d1iyfa_
not modelled 91.3 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
60c2kdiA_
not modelled 91.2 8
PDB header:signaling protein
Chain: A: PDB Molecule:ubiquitin, vacuolar protein sorting-associated
PDBTitle: solution structure of a ubiquitin/uim fusion protein
61d1v86a_
not modelled 91.1 16
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
62c3q3fA_
not modelled 90.9 13
PDB header:hydrolase, protein binding
Chain: A: PDB Molecule:ribonuclease/ubiquitin chimeric protein;
PDBTitle: engineering domain-swapped binding interfaces by mutually exclusive2 folding: insertion of ubiquitin into position 103 of barnase
63c3m62B_
not modelled 90.8 13
PDB header:ligase/protein binding
Chain: B: PDB Molecule:uv excision repair protein rad23;
PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of rad23
64d1v6ea_
not modelled 90.7 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
65c6gf2A_
not modelled 90.6 11
PDB header:immune system
Chain: A: PDB Molecule:ubiquitin d;
PDBTitle: the structure of the ubiquitin-like modifier fat10 reveals a novel2 targeting mechanism for degradation by the 26s proteasome
66c2jxxA_
not modelled 90.0 17
PDB header:protein binding
Chain: A: PDB Molecule:nfatc2-interacting protein;
PDBTitle: nmr solution structure of ubiquitin-like domain of2 nfatc2ip. northeast structural genomics consortium target3 hr5627
67d1p1aa_
not modelled 89.9 11
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
68c2kk8A_
not modelled 89.9 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein at4g05270;
PDBTitle: nmr solution structure of a putative uncharacterized protein2 obtained from arabidopsis thaliana: northeast structural3 genomics consortium target ar3449a
69c2ojrA_
not modelled 89.5 12
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin;
PDBTitle: structure of ubiquitin solved by sad using the lanthanide-binding tag
70c2w9nA_
not modelled 88.7 11
PDB header:cell cycle
Chain: A: PDB Molecule:ubiquitin;
PDBTitle: crystal structure of linear di-ubiquitin
71c2kanA_
not modelled 88.5 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ar3433a;
PDBTitle: solution nmr structure of ubiquitin-like domain of2 arabidopsis thaliana protein at2g32350. northeast3 structural genomics consortium target ar3433a
72c5gjlA_
not modelled 88.5 13
PDB header:protein binding
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of sumo from plasmodium falciparum
73d1wxva1
not modelled 88.5 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
74c2dzkA_
not modelled 88.4 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ubx domain-containing protein 2;
PDBTitle: structure of the ubx domain in mouse ubx domain-containing2 protein 2
75d1oqya4
not modelled 88.0 11
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
76c2l76A_
not modelled 87.8 13
PDB header:transcription
Chain: A: PDB Molecule:nfatc2-interacting protein;
PDBTitle: solution nmr structure of human nfatc2ip ubiquitin-like domain,2 nfatc2ip_244_338, nesg target ht65a/ocsp target hs00387_244_338/sgc-3 toronto
77d1t0ya_
not modelled 87.8 20
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
78c1t0yA_
not modelled 87.8 20
PDB header:chaperone
Chain: A: PDB Molecule:tubulin folding cofactor b;
PDBTitle: solution structure of a ubiquitin-like domain from tubulin-2 binding cofactor b
79d1z2ma2
not modelled 87.7 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
80c2mbeA_
not modelled 87.2 13
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin d;
PDBTitle: backbone 1h and 15n chemical shift assignments for the first domain of2 fat10
81c6a42A_
not modelled 86.6 11
PDB header:dna binding protein
Chain: A: PDB Molecule:rna-directed dna polymerase homolog (r1),polyubiquitin-c;
PDBTitle: r1en(5-223)-ubiquitin fusion
82d1we6a_
not modelled 86.4 14
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
83d1wjua_
not modelled 85.6 8
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
84c1qzeA_
not modelled 85.6 11
PDB header:replication
Chain: A: PDB Molecule:uv excision repair protein rad23 homolog a;
PDBTitle: hhr23a protein structure based on residual dipolar coupling2 data
85c2kc2A_
not modelled 84.7 24
PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: nmr structure of the f1 domain (residues 86-202) of the2 talin
86d2al3a1
not modelled 84.6 15
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:UBX domain
87c2lrwA_
not modelled 84.4 14
PDB header:cell cycle
Chain: A: PDB Molecule:ubiquitin, putative;
PDBTitle: solution structure of a ubiquitin-like protein from trypanosoma brucei
88c3tixA_
not modelled 84.4 16
PDB header:gene regulation/protein binding
Chain: A: PDB Molecule:ubiquitin-like protein smt3,rna-induced transcriptional
PDBTitle: crystal structure of the chp1-tas3 complex core
89c4dbgA_
not modelled 84.1 18
PDB header:ligase
Chain: A: PDB Molecule:ranbp-type and c3hc4-type zinc finger-containing protein 1;
PDBTitle: crystal structure of hoil-1l-ubl complexed with a hoip-uba derivative
90d1ogwa_
not modelled 83.9 7
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
91c2mx2A_
not modelled 83.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:deubiquitinating protein vcip135;
PDBTitle: ubx-l domain of vcip135
92c3ivfA_
not modelled 82.9 16
PDB header:structural protein
Chain: A: PDB Molecule:talin-1;
PDBTitle: crystal structure of the talin head ferm domain
93c4k95G_
not modelled 82.8 13
PDB header:ligase
Chain: G: PDB Molecule:e3 ubiquitin-protein ligase parkin;
PDBTitle: crystal structure of parkin
94c2l7rA_
not modelled 82.6 14
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin-like protein fubi;
PDBTitle: solution nmr structure of n-terminal ubiquitin-like domain of fubi, a2 ribosomal protein s30 precursor from homo sapiens. northeast3 structural genomics consortium (nesg) target hr6166
95d1h8ca_
not modelled 82.2 12
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:UBX domain
96c3a4rB_
not modelled 80.1 20
PDB header:transcription
Chain: B: PDB Molecule:nfatc2-interacting protein;
PDBTitle: the crystal structure of sumo-like domain 2 in nip45
97c6mdhA_
not modelled 80.0 16
PDB header:signaling protein
Chain: A: PDB Molecule:ubiquitin-like protein isg15;
PDBTitle: x-ray crystal structure of isg15 from myotis davidii
98c2pjhA_
not modelled 77.1 16
PDB header:transport protein
Chain: A: PDB Molecule:nuclear protein localization protein 4 homolog;
PDBTitle: strctural model of the p97 n domain- npl4 ubd complex
99d1wjna_
not modelled 77.1 17
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
100c5y3tC_
not modelled 77.1 14
PDB header:ligase
Chain: C: PDB Molecule:sharpin;
PDBTitle: crystal structure of hetero-trimeric core of lubac: hoip double-uba2 complexed with hoil-1l ubl and sharpin ubl
101c4b6wA_
not modelled 76.5 7
PDB header:chaperone
Chain: A: PDB Molecule:tubulin-specific chaperone;
PDBTitle: architecture of trypanosoma brucei tubulin-binding cofactor b
102c5b83A_
not modelled 75.9 12
PDB header:signaling protein
Chain: A: PDB Molecule:tetra ubiquitin;
PDBTitle: crystal structure of optineurin uban in complex with linear ubiquitin
103c3pgeA_
not modelled 75.7 15
PDB header:dna binding protein
Chain: A: PDB Molecule:sumo-modified proliferating cell nuclear antigen;
PDBTitle: structure of sumoylated pcna
104d1i42a_
not modelled 75.1 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:UBX domain
105c2mrpA_
not modelled 73.6 17
PDB header:ubiquitin-binding protein
Chain: A: PDB Molecule:dna damage-inducible protein 1;
PDBTitle: nmr solution structure of the ubiquitin like domain (ubl) of dna-2 damage-inducible 1 protein (ddi1)
106c3v7oB_
not modelled 73.4 18
PDB header:transcription
Chain: B: PDB Molecule:minor nucleoprotein vp30;
PDBTitle: crystal structure of the c-terminal domain of ebola virus vp30 (strain2 reston-89)
107d1wiaa_
not modelled 71.9 10
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
108c5chfB_
not modelled 71.5 13
PDB header:antiviral protein
Chain: B: PDB Molecule:ubiquitin-like protein isg15;
PDBTitle: crystal structure of murine isg15 in space group p21212
109c1z2mA_
not modelled 69.7 16
PDB header:signaling protein
Chain: A: PDB Molecule:interferon, alpha-inducible protein (clone ifi-
PDBTitle: crystal structure of isg15, the interferon-induced2 ubiquitin cross reactive protein
110c2n9pC_
not modelled 68.9 14
PDB header:ligase
Chain: C: PDB Molecule:large proline-rich protein bag6;
PDBTitle: solution structure of rnf126 n-terminal zinc finger domain in complex2 with bag6 ubiquitin-like domain
111d1wx9a1
not modelled 68.6 18
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
112d1y8xb1
not modelled 66.7 28
Fold:Activating enzymes of the ubiquitin-like proteins
Superfamily:Activating enzymes of the ubiquitin-like proteins
Family:Ubiquitin activating enzymes (UBA)
113c5xq0B_
not modelled 66.4 26
PDB header:signaling protein
Chain: B: PDB Molecule:fermitin family homolog 2,integrin beta-1;
PDBTitle: structural basis of kindlin-mediated integrin recognition and2 activation
114c3ai5A_
not modelled 63.1 13
PDB header:fluorescent protein, transcription
Chain: A: PDB Molecule:yeast enhanced green fluorescent protein,ubiquitin;
PDBTitle: crystal structure of yeast enhanced green fluorescent protein-2 ubiquitin fusion protein
115c2kjrA_
not modelled 62.3 19
PDB header:chaperone
Chain: A: PDB Molecule:cg11242;
PDBTitle: solution nmr structure of the n-terminal ubiquitin-like2 domain from tubulin-binding cofactor b, cg11242, from3 drosophila melanogaster. northeast structural genomics4 consortium target fr629a (residues 8-92)
116c5n9vA_
not modelled 57.6 14
PDB header:transferase
Chain: A: PDB Molecule:nad(p)(+)--arginine adp-ribosyltransferase;
PDBTitle: nmr solution structure of ubl5 domain from polyubiquitin locus of2 t.thermophila.
117d2cr5a1
not modelled 56.8 13
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:UBX domain
118c5ifsA_
not modelled 56.2 13
PDB header:signaling protein
Chain: A: PDB Molecule:tether containing ubx domain for glut4;
PDBTitle: quantitative interaction mapping reveals an extended ubiquitin2 regulatory domain in aspl that disrupts functional p97 hexamers and3 induces cell death
119c3t9lA_
not modelled 55.4 15
PDB header:hydrolase
Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 15;
PDBTitle: structure of n-terminal dusp-ubl domains of human usp15
120c5nsaA_
not modelled 53.2 26
PDB header:transport protein
Chain: A: PDB Molecule:transcobalamin-2;
PDBTitle: beta domain of human transcobalamin bound to co-beta-[2-(2,4-2 difluorophenyl)ethinyl]cobalamin

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below