Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1796_(mycP5)_2033736_2035493
DateFri Aug 2 13:30:40 BST 2019
Unique Job IDaa40fa11a65891f4
SequenceMQRFGTGSSR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.999 Y:54.607 Z:54.324
Model (left) based on template c4j94A_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:membrane-anchored mycosin mycp1;
PDBTitle: crystal structure of mycp1 from the esx-1 type vii secretion system
Confidence and coverage
Confidence:100.0% Coverage: 65%
380 residues ( 65% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4j94A_
100.0 56
PDB header:hydrolase
Chain: A: PDB Molecule:membrane-anchored mycosin mycp1;
PDBTitle: crystal structure of mycp1 from the esx-1 type vii secretion system
2d1r6va_
100.0 30
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
3c4tr2A_
100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin-like 1 serine protease;
PDBTitle: crystal structure of pvsub1
4c4kg7A_
100.0 56
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase s8 and s53, subtilisin, kexin, sedolisin;
PDBTitle: structure of mycp3 protease from the type vii (esx-3) secretion2 system.
5c3vtaB_
100.0 30
PDB header:hydrolase
Chain: B: PDB Molecule:cucumisin;
PDBTitle: crystal structure of cucumisin, a subtilisin-like endoprotease from2 cucumis melo l
6c3i74B_
100.0 33
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:subtilisin-like protease;
PDBTitle: crystal structure of the plant subtilisin-like protease sbt3 in2 complex with a chloromethylketone inhibitor
7c2oxaA_
100.0 28
PDB header:hydrolase
Chain: A: PDB Molecule:extracellular serine protease;
PDBTitle: crystal structure of serine protease of aeromonas sobria
8c5xyrA_
100.0 33
PDB header:lyase
Chain: A: PDB Molecule:chemokine protease c;
PDBTitle: crystal structure of a serine protease from streptococcus species
9c5xxzB_
100.0 32
PDB header:lyase
Chain: B: PDB Molecule:chemokine protease c;
PDBTitle: crystal structure of a serine protease from streptococcus species
10c6mw4A_
100.0 27
PDB header:signaling protein
Chain: A: PDB Molecule:putative germination-specific protease;
PDBTitle: structure of pseudoprotease cspc from clostridioides difficile
11c1xf1A_
100.0 32
PDB header:hydrolase
Chain: A: PDB Molecule:c5a peptidase;
PDBTitle: structure of c5a peptidase- a key virulence factor from2 streptococcus
12c1p8jB_
100.0 23
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:furin precursor;
PDBTitle: crystal structure of the proprotein convertase furin
13c1r64A_
100.0 21
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:kexin;
PDBTitle: the 2.2 a crystal structure of kex2 protease in complex with ac-arg-2 glu-lys-boroarg peptidyl boronic acid inhibitor
14c3qfhE_
100.0 26
PDB header:hydrolase
Chain: E: PDB Molecule:epidermin leader peptide processing serine protease epip;
PDBTitle: 2.05 angstrom resolution crystal structure of epidermin leader peptide2 processing serine protease (epip) from staphylococcus aureus.
15c3t41B_
100.0 26
PDB header:hydrolase
Chain: B: PDB Molecule:epidermin leader peptide processing serine protease epip;
PDBTitle: 1.95 angstrom resolution crystal structure of epidermin leader peptide2 processing serine protease (epip) s393a mutant from staphylococcus3 aureus
16c5vlpA_
100.0 31
PDB header:hydrolase
Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: pcsk9 complex with ldlr antagonist peptide and fab7g7
17c2pmwB_
100.0 30
PDB header:hydrolase
Chain: B: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: the crystal structure of proprotein convertase subtilisin2 kexin type 9 (pcsk9)
18c3bpsA_
100.0 28
PDB header:hydrolase/lipid transport
Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: pcsk9:egf-a complex
19d1p8ja2
100.0 22
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
20c2iy9A_
100.0 29
PDB header:toxin
Chain: A: PDB Molecule:suba;
PDBTitle: crystal structure of the a-subunit of the ab5 toxin from e.2 coli
21c4i0wB_
not modelled 100.0 23
PDB header:hydrolase
Chain: B: PDB Molecule:protease cspb;
PDBTitle: structure of the clostridium perfringens cspb protease
22c4aktB_
not modelled 100.0 37
PDB header:hydrolase/peptide
Chain: B: PDB Molecule:thiazoline oxidase/subtilisin-like protease;
PDBTitle: patg macrocyclase in complex with peptide
23c1wmeA_
not modelled 100.0 36
PDB header:hydrolase
Chain: A: PDB Molecule:protease;
PDBTitle: crystal structure of alkaline serine protease kp-43 from bacillus sp.2 ksm-kp43 (1.50 angstrom, 293 k)
24c4mzdA_
not modelled 100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:nisin leader peptide-processing serine protease nisp;
PDBTitle: high resolution crystal structure of the nisin leader peptidase nisp2 from lactococcus lactis
25d1v6ca_
not modelled 100.0 29
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
26c3lxuX_
not modelled 100.0 20
PDB header:hydrolase
Chain: X: PDB Molecule:tripeptidyl-peptidase 2;
PDBTitle: crystal structure of tripeptidyl peptidase 2 (tpp ii)
27c4lvnA_
not modelled 100.0 25
PDB header:hydrolase/inhibitor/immune system
Chain: A: PDB Molecule:subtilisin-like serine protease;
PDBTitle: crystal structure of pfsub1-prodomain-nimp.m7 fab complex
28d2id4a2
not modelled 100.0 21
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
29c5vllA_
not modelled 100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: short pcsk9 delta-p' complex with peptide pep3
30c3afgA_
not modelled 100.0 26
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin-like serine protease;
PDBTitle: crystal structure of pron-tk-sp from thermococcus kodakaraensis
31c3whiA_
not modelled 100.0 30
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin e;
PDBTitle: crystal structure of unautoprocessed form of is1-inserted pro-2 subtilisin e
32c4zoqM_
not modelled 100.0 28
PDB header:hydrolase
Chain: M: PDB Molecule:intracellular serine protease;
PDBTitle: crystal structure of a lanthipeptide protease
33c3vv3B_
not modelled 100.0 27
PDB header:hydrolase
Chain: B: PDB Molecule:deseasin mcp-01;
PDBTitle: crystal structure of deseasin mcp-01 from pseudoalteromonas sp. sm9913
34d1meea_
not modelled 100.0 33
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
35d1gcia_
not modelled 100.0 47
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
36d1dbia_
not modelled 100.0 48
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
37d1bh6a_
not modelled 100.0 36
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
38d1wmda2
not modelled 100.0 33
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
39d1to2e_
not modelled 100.0 44
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
40c5yl7A_
not modelled 100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:pseudoalteromonas arctica pamc 21717;
PDBTitle: proteases from pseudoalteromonas arctica pamc 21717 (pro21717)
41d1thma_
not modelled 100.0 42
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
42d1r0re_
not modelled 100.0 37
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
43d1gnsa_
not modelled 100.0 45
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
44c5z6oA_
not modelled 100.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:protease;
PDBTitle: crystal structure of penicillium cyclopium protease
45c2z2zA_
not modelled 100.0 34
PDB header:hydrolase
Chain: A: PDB Molecule:tk-subtilisin precursor;
PDBTitle: crystal structure of unautoprocessed form of tk-subtilisin soaked by2 10mm cacl2
46c3f7oB_
not modelled 100.0 22
PDB header:hydrolase
Chain: B: PDB Molecule:serine protease;
PDBTitle: crystal structure of cuticle-degrading protease from paecilomyces2 lilacinus (pl646)
47d2ixta1
not modelled 100.0 24
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
48c3lpcA_
not modelled 100.0 23
PDB header:hydrolase
Chain: A: PDB Molecule:aprb2;
PDBTitle: crystal structure of a subtilisin-like protease
49d2pwaa1
not modelled 100.0 25
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Subtilases
50c4dztA_
not modelled 100.0 28
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:aqualysin-1;
PDBTitle: aqualysin i: the crystal structure of a serine protease from an2 extreme thermophile, thermus aquaticus yt-1
51c2w2qA_
not modelled 100.0 27
PDB header:hydrolase/receptor
Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9;
PDBTitle: pcsk9-deltac d374h mutant bound to wt egf-a of ldlr
52d1sioa_
not modelled 100.0 32
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Serine-carboxyl proteinase, SCP
53c1s2nB_
not modelled 100.0 30
PDB header:hydrolase
Chain: B: PDB Molecule:extracellular subtilisin-like serine proteinase;
PDBTitle: crystal structure of a cold adapted subtilisin-like serine proteinase
54c2z2yC_
not modelled 100.0 38
PDB header:hydrolase
Chain: C: PDB Molecule:tk-subtilisin;
PDBTitle: crystal structure of autoprocessed form of tk-subtilisin
55c2b6nA_
not modelled 100.0 29
PDB header:hydrolase
Chain: A: PDB Molecule:proteinase k;
PDBTitle: the 1.8 a crystal structure of a proteinase k like enzyme from a2 psychrotroph serratia species
56c2x8jB_
not modelled 100.0 26
PDB header:hydrolase
Chain: B: PDB Molecule:intracellular subtilisin protease;
PDBTitle: intracellular subtilisin precursor from b. clausii
57d1t1ga_
not modelled 100.0 32
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Serine-carboxyl proteinase, SCP
58c4aksA_
not modelled 100.0 42
PDB header:hydrolase
Chain: A: PDB Molecule:thiazoline oxidase/subtilisin-like protease;
PDBTitle: patg macrocyclase domain
59c6f9mA_
not modelled 100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:serine protease;
PDBTitle: the lipy/f-motif in an intracellular subtilisin protease is involved2 in inhibition
60c4h6wB_
not modelled 100.0 43
PDB header:hydrolase
Chain: B: PDB Molecule:n-terminal cyanobactin protease;
PDBTitle: structure of prenylagaramide maturation protease paga
61c3zxxA_
not modelled 100.0 31
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin-like protein;
PDBTitle: structure of self-cleaved protease domain of pata
62c3zxyA_
not modelled 100.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:subtilisin-like protein;
PDBTitle: structure of s218a mutant of the protease domain of pata
63d1ga6a_
not modelled 100.0 19
Fold:Subtilisin-like
Superfamily:Subtilisin-like
Family:Serine-carboxyl proteinase, SCP
64c1t1eA_
not modelled 99.9 31
PDB header:hydrolase
Chain: A: PDB Molecule:kumamolisin;
PDBTitle: high resolution crystal structure of the intact pro-2 kumamolisin, a sedolisin type proteinase (previously3 called kumamolysin or kscp)
65c3ee6A_
not modelled 99.9 17
PDB header:hydrolase
Chain: A: PDB Molecule:tripeptidyl-peptidase 1;
PDBTitle: crystal structure analysis of tripeptidyl peptidase -i
66c3edyA_
not modelled 99.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:tripeptidyl-peptidase 1;
PDBTitle: crystal structure of the precursor form of human tripeptidyl-peptidase2 1
67d1k78a2
not modelled 71.8 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
68d6paxa2
not modelled 64.8 23
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
69c5kzoA_
not modelled 59.1 20
PDB header:transcription
Chain: A: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: notch1 transmembrane and associated juxtamembrane segment
70c2k27A_
not modelled 48.4 19
PDB header:transcription regulator
Chain: A: PDB Molecule:paired box protein pax-8;
PDBTitle: solution structure of human pax8 paired box domain
71d1mzga_
not modelled 47.1 36
Fold:SufE/NifU
Superfamily:SufE/NifU
Family:SufE-like
72d1ni7a_
not modelled 46.8 20
Fold:SufE/NifU
Superfamily:SufE/NifU
Family:SufE-like
73c2m20B_
not modelled 38.3 28
PDB header:signaling protein
Chain: B: PDB Molecule:epidermal growth factor receptor;
PDBTitle: egfr transmembrane - juxtamembrane (tm-jm) segment in bicelles: md2 guided nmr refined structure.
74c2pe4A_
not modelled 34.3 37
PDB header:hydrolase
Chain: A: PDB Molecule:hyaluronidase-1;
PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis
75c1fcuA_
not modelled 32.7 16
PDB header:hydrolase
Chain: A: PDB Molecule:hyaluronoglucosaminidase;
PDBTitle: crystal structure (trigonal) of bee venom hyaluronidase
76c2kluA_
not modelled 31.8 33
PDB header:immune system, membrane protein
Chain: A: PDB Molecule:t-cell surface glycoprotein cd4;
PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
77c1wloA_
not modelled 28.2 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sufe protein;
PDBTitle: solution structure of the hypothetical protein from thermus2 thermophilus hb8
78d1fcqa_
not modelled 27.5 16
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Bee venom hyaluronidase
79d1pdnc_
not modelled 24.2 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
80d1s6la1
not modelled 20.2 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MerB N-terminal domain-like
81c2lcxB_
not modelled 18.3 21
PDB header:transferase
Chain: B: PDB Molecule:receptor tyrosine-protein kinase erbb-4;
PDBTitle: spatial structure of the erbb4 dimeric tm domain
82c2l2tA_
not modelled 18.3 21
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-4;
PDBTitle: solution nmr structure of the erbb4 dimeric membrane domain
83c3sjrB_
not modelled 17.7 22
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved unkown function protein cv_1783 from2 chromobacterium violaceum atcc 12472
84c6agfB_
not modelled 17.1 12
PDB header:membrane protein
Chain: B: PDB Molecule:sodium channel subunit beta-1;
PDBTitle: structure of the human voltage-gated sodium channel nav1.4 in complex2 with beta1
85c6imme_
not modelled 14.1 22
PDB header:virus
Chain: E: PDB Molecule:
PDBTitle: cryo-em structure of an alphavirus, sindbis virus
86c6paxA_
not modelled 13.3 23
PDB header:gene regulation/dna
Chain: A: PDB Molecule:homeobox protein pax-6;
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
87c2ks1B_
not modelled 11.6 31
PDB header:transferase
Chain: B: PDB Molecule:epidermal growth factor receptor;
PDBTitle: heterodimeric association of transmembrane domains of erbb1 and erbb22 receptors enabling kinase activation
88c2v7iA_
not modelled 10.4 28
PDB header:biosynthetic protein
Chain: A: PDB Molecule:prnb;
PDBTitle: prnb native
89d1ixsa_
not modelled 10.4 24
Fold:RuvA C-terminal domain-like
Superfamily:DNA helicase RuvA subunit, C-terminal domain
Family:DNA helicase RuvA subunit, C-terminal domain
90c2k9yB_
not modelled 10.3 25
PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
91c2k9yA_
not modelled 10.3 25
PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
92c2yewI_
not modelled 10.3 23
PDB header:virus
Chain: I: PDB Molecule:e2 envelope glycoprotein;
PDBTitle: modeling barmah forest virus structural proteins
93d2ga1a1
not modelled 10.0 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Alr1493-like
94c1iijA_
not modelled 10.0 27
PDB header:signaling protein
Chain: A: PDB Molecule:erbb-2 receptor protein-tyrosine kinase;
PDBTitle: solution structure of the neu/erbb-2 membrane spanning2 segment
95d1kxpd3
not modelled 10.0 16
Fold:Serum albumin-like
Superfamily:Serum albumin-like
Family:Serum albumin-like
96c2n2aA_
not modelled 9.7 21
PDB header:membrane protein
Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2;
PDBTitle: spatial structure of her2/erbb2 dimeric transmembrane domain in the2 presence of cytoplasmic juxtamembrane domains
97c3cqyA_
not modelled 8.7 38
PDB header:transferase
Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase;
PDBTitle: crystal structure of a functionally unknown protein (so_1313) from2 shewanella oneidensis mr-1
98c4yh5B_
not modelled 7.8 38
PDB header:transferase
Chain: B: PDB Molecule:levoglucosan kinase;
PDBTitle: lipomyces starkeyi levoglucosan kinase bound to adp and manganese
99c6c14A_
not modelled 7.1 13
PDB header:membrane protein, metal transport
Chain: A: PDB Molecule:protocadherin-15;
PDBTitle: cryoem structure of mouse pcdh15-1ec-lhfpl5 complex

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below