Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1804c_(-)_2047030_2047356
DateFri Aug 2 13:30:41 BST 2019
Unique Job IDd38c30233cab12da
SequenceMRVVSTLLSI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.307 Y:27.515 Z:37.406
Model (left) based on template c6c3rB_
Top template information
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
Confidence and coverage
Confidence: 61.7% Coverage: 34%
37 residues ( 34% of your sequence) have been modelled with 61.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6c3rB_



61.7 14
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
2c4rl6A_



22.3 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q04l03_strp2 protein from streptococcus2 pneumoniae. northeast structural genomics consortium target spr105
3c3pvsA_



21.3 16
PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
4d2csua3



20.4 25
Fold:Flavodoxin-like
Superfamily:Succinyl-CoA synthetase domains
Family:Succinyl-CoA synthetase domains
5d1mkea1



15.0 22
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
6c4inaA_



14.5 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q7mss8_wolsu protein from wolinella2 succinogenes. northeast structural genomics consortium target wsr35
7c5k9xA_



14.2 21
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha chain from legionella2 pneumophila subsp. pneumophila
8c2ekcA_



13.3 21
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5
9c5uqdA_



11.8 38
PDB header:oxidoreductase
Chain: A: PDB Molecule:dumpy: shorter than wild-type;
PDBTitle: dpy-21 in complex with fe(ii) and alpha-ketoglutarate
10c5kinC_



10.5 20
PDB header:lyase
Chain: C: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha beta complex from2 streptococcus pneumoniae
11c2lweA_



9.5 20
PDB header:signaling protein
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx58;
PDBTitle: solution structure of mutant (t170e) second card of human rig-i
12c3j9xJ_



9.0 28
PDB header:virus
Chain: J: PDB Molecule:coat protein;
PDBTitle: a virus that infects a hyperthermophile encapsidates a-form dna
13c5tchG_



9.0 24
PDB header:lyase
Chain: G: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase from m. tuberculosis -2 ligand-free form, trpa-g66v mutant
14c5l78A_



8.9 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-aminoadipic semialdehyde synthase, mitochondrial;
PDBTitle: crystal structure of human aminoadipate semialdehyde synthase,2 saccharopine dehydrogenase domain (in nad+ bound form)
15c3ss4C_



8.5 31
PDB header:hydrolase
Chain: C: PDB Molecule:glutaminase c;
PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form
16d2j9ga2



8.3 22
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
17d1zsqa2



7.8 25
Fold:(Phosphotyrosine protein) phosphatases II
Superfamily:(Phosphotyrosine protein) phosphatases II
Family:Myotubularin-like phosphatases
18d1ulza2



7.7 33
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
19c2mulA_



7.1 58
PDB header:protein binding
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase huwe1;
PDBTitle: solution structure of the ubm1 domain of human huwe1/arf-bp1
20c3f2eA_



6.6 23
PDB header:viral protein
Chain: A: PDB Molecule:sirv coat protein;
PDBTitle: crystal structure of yellowstone sirv coat protein c-terminus
21d1axib1



not modelled 6.4 27
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Fibronectin type III
Family:Fibronectin type III
22c1vjqB_



not modelled 6.4 37
PDB header:structural genomics, de novo protein
Chain: B: PDB Molecule:designed protein;
PDBTitle: designed protein based on backbone conformation of2 procarboxypeptidase-a (1aye) with sidechains chosen for maximal3 predicted stability.
23d1xoda1



not modelled 6.1 27
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
24c2gacD_



not modelled 6.0 24
PDB header:hydrolase
Chain: D: PDB Molecule:glycosylasparaginase;
PDBTitle: t152c mutant glycosylasparaginase from flavobacterium2 meningosepticum
25c5us3A_



not modelled 6.0 75
PDB header:de novo protein
Chain: A: PDB Molecule:heterogeneous-backbone variant of the sp1-3 zinc finger: n-
PDBTitle: heterogeneous-backbone foldamer mimic of the sp1-3 zinc finger
26c4y7iB_



not modelled 5.9 22
PDB header:hydrolase
Chain: B: PDB Molecule:myotubularin-related protein 8;
PDBTitle: crystal structure of mtmr8
27c2ifsA_



not modelled 5.6 19
PDB header:signaling protein
Chain: A: PDB Molecule:wiskott-aldrich syndrome protien interacting protein and
PDBTitle: structure of the n-wasp evh1 domain in complex with an extended wip2 peptide
28c1apzB_



not modelled 5.5 12
PDB header:complex (hydrolase/peptide)
Chain: B: PDB Molecule:aspartylglucosaminidase;
PDBTitle: human aspartylglucosaminidase complex with reaction product
29c3uo9B_



not modelled 5.4 31
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial;
PDBTitle: crystal structure of human gac in complex with glutamate and bptes
30c2l5yA_



not modelled 5.3 5
PDB header:signaling protein
Chain: A: PDB Molecule:stromal interaction molecule 2;
PDBTitle: nmr structure of calcium-loaded stim2 ef-sam.
31c2q5tA_



not modelled 5.3 26
PDB header:toxin
Chain: A: PDB Molecule:cholix toxin;
PDBTitle: full-length cholix toxin from vibrio cholerae
32c5uqeB_



not modelled 5.2 31
PDB header:hydrolase
Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial;
PDBTitle: multidomain structure of human kidney-type glutaminase(kga/gls)
33c2li5B_



not modelled 5.2 56
PDB header:protein transport
Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7;
PDBTitle: nmr structure of atg8-atg7c30 complex
34c4naeA_



not modelled 5.1 28
PDB header:transferase
Chain: A: PDB Molecule:heptaprenylglyceryl phosphate synthase;
PDBTitle: pcrb from geobacillus kaustophilus, with bound g1p

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