Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1808_(PPE32)_2049928_2051157
DateFri Aug 2 13:30:42 BST 2019
Unique Job ID61fc79690c716eee
SequenceLDFGALPPEI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:58.791 Y:72.050 Z:69.857
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 42%
173 residues ( 42% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 55% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_
100.0 64
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2d2g38b1
100.0 32
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
3c2g38B_
100.0 32
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
4c4xy3A_
100.0 17
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_
98.5 16
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_
97.7 10
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c4iogD_
97.6 15
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
8c3gvmA_
97.6 15
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_
97.4 16
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1
96.7 17
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsB_
95.7 16
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12d1wa8b1
95.3 15
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
13c4lwsA_
95.1 15
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
14c4i0xA_
93.4 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
15c2kg7B_
89.7 16
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xJ_
80.2 15
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17d1ui5a2
20.0 22
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
18c5frgA_
18.9 75
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
19c1bkvA_
15.0 56
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
20c1bkvB_
14.3 56
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
21c1bkvC_
not modelled 14.3 56
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
22d1zeea1
not modelled 12.8 29
Fold:Indolic compounds 2,3-dioxygenase-like
Superfamily:Indolic compounds 2,3-dioxygenase-like
Family:Indoleamine 2,3-dioxygenase-like
23c2ke4A_
not modelled 11.4 75
PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
24c1vytF_
not modelled 10.7 38
PDB header:transport protein
Chain: F: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
25c3h6pB_
not modelled 9.0 35
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:esat-6 like protein esxs;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
26c2lkqA_
not modelled 8.6 44
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
27c2nvjA_
not modelled 8.5 40
PDB header:hydrolase
Chain: A: PDB Molecule:25mer peptide from vacuolar atp synthase subunit
PDBTitle: nmr structures of transmembrane segment from subunit a from2 the yeast proton v-atpase
28c2kg7A_
not modelled 8.3 47
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
29c1bzgA_
not modelled 8.2 0
PDB header:hormone
Chain: A: PDB Molecule:parathyroid hormone-related protein;
PDBTitle: the solution structure of human parathyroid hormone-related2 protein (1-34) in near-physiological solution, nmr, 303 structures
30c2iu1A_
not modelled 7.6 11
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
31c1vytE_
not modelled 7.5 38
PDB header:transport protein
Chain: E: PDB Molecule:voltage-dependent l-type calcium channel
PDBTitle: beta3 subunit complexed with aid
32c4lzxB_
not modelled 7.3 31
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-free cam
33c4dexB_
not modelled 7.3 38
PDB header:transport protein
Chain: B: PDB Molecule:voltage-dependent n-type calcium channel subunit alpha-1b;
PDBTitle: crystal structure of the voltage dependent calcium channel beta-22 subunit in complex with the cav2.2 i-ii linker.
34c3ub0D_
not modelled 7.2 21
PDB header:replication
Chain: D: PDB Molecule:non-structural protein 6, nsp6,;
PDBTitle: crystal structure of the nonstructural protein 7 and 8 complex of2 feline coronavirus
35c2fulE_
not modelled 7.2 22
PDB header:translation
Chain: E: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of the c-terminal domain of s. cerevisiae eif5
36c5i4rA_
not modelled 7.1 43
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:contact-dependent inhibitor a;
PDBTitle: contact-dependent inhibition system from escherichia coli nc101 -2 ternary cdia/cdii/ef-tu complex (trypsin-modified)
37c6aokA_
not modelled 7.0 38
PDB header:hydrolase
Chain: A: PDB Molecule:ceg4;
PDBTitle: crystal structure of legionella pneumophila effector ceg4 with n-2 terminal tev protease cleavage sequence
38c6et5m_
not modelled 7.0 44
PDB header:photosynthesis
Chain: M: PDB Molecule:reaction center protein m chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
39c6et5s_
not modelled 7.0 44
PDB header:photosynthesis
Chain: S: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
40c6et5O_
not modelled 7.0 44
PDB header:photosynthesis
Chain: O: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
41c6et5R_
not modelled 7.0 44
PDB header:photosynthesis
Chain: R: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
42c6et5U_
not modelled 7.0 44
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
43c6et55_
not modelled 7.0 44
PDB header:photosynthesis
Chain: 5: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
44c6et52_
not modelled 7.0 44
PDB header:photosynthesis
Chain: 2: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
45c6et5I_
not modelled 7.0 44
PDB header:photosynthesis
Chain: I: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
46c6et5X_
not modelled 7.0 44
PDB header:photosynthesis
Chain: X: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
47c6et5a_
not modelled 7.0 44
PDB header:photosynthesis
Chain: A: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
48c6et5y_
not modelled 7.0 44
PDB header:photosynthesis
Chain: Y: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
49c6et5v_
not modelled 7.0 44
PDB header:photosynthesis
Chain: V: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
50c6et5j_
not modelled 7.0 44
PDB header:photosynthesis
Chain: J: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
51c6et5d_
not modelled 7.0 44
PDB header:photosynthesis
Chain: D: PDB Molecule:
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
52c6et5g_
not modelled 7.0 44
PDB header:photosynthesis
Chain: G: PDB Molecule:light-harvesting protein b-1015 beta chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
53c6et5p_
not modelled 7.0 44
PDB header:photosynthesis
Chain: P: PDB Molecule:light-harvesting protein b-1015 alpha chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
54c6cgjA_
not modelled 6.9 38
PDB header:hydrolase
Chain: A: PDB Molecule:effector protein lem4 (lpg1101);
PDBTitle: structure of the had domain of effector protein lem4 (lpg1101) from2 legionella pneumophila
55c5uc0B_
not modelled 6.9 80
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein cog5400;
PDBTitle: crystal structure of beta-barrel-like, uncharacterized protein of2 cog5400 from brucella abortus
56c2jtwA_
not modelled 6.8 50
PDB header:membrane protein
Chain: A: PDB Molecule:transmembrane helix 7 of yeast vatpase;
PDBTitle: solution structure of tm7 bound to dpc micelles
57c5l85B_
not modelled 6.7 27
PDB header:signaling protein
Chain: B: PDB Molecule:nuclear fragile x mental retardation-interacting protein 1;
PDBTitle: solution structure of the complex between human znhit3 and nufip12 proteins
58c3sjrB_
not modelled 6.3 6
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of conserved unkown function protein cv_1783 from2 chromobacterium violaceum atcc 12472
59c4m1lB_
not modelled 6.2 36
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-bound cam
60d1khba2
not modelled 6.2 20
Fold:PEP carboxykinase N-terminal domain
Superfamily:PEP carboxykinase N-terminal domain
Family:PEP carboxykinase N-terminal domain
61c1t0jC_
not modelled 6.2 43
PDB header:signaling protein
Chain: C: PDB Molecule:voltage-dependent l-type calcium channel alpha-1c subunit;
PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
62c2y5tG_
not modelled 6.1 83
PDB header:immune system
Chain: G: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
63d1vlfn1
not modelled 6.1 80
Fold:Prealbumin-like
Superfamily:Cna protein B-type domain
Family:Cna protein B-type domain
64c1nauA_
not modelled 6.1 25
PDB header:hormone/growth factor
Chain: A: PDB Molecule:glucagon;
PDBTitle: nmr solution structure of the glucagon antagonist [deshis1,2 desphe6, glu9]glucagon amide in the presence of3 perdeuterated dodecylphosphocholine micelles
65c4xb6D_
not modelled 5.9 11
PDB header:transferase
Chain: D: PDB Molecule:alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase;
PDBTitle: structure of the e. coli c-p lyase core complex
66c2y5tE_
not modelled 5.9 83
PDB header:immune system
Chain: E: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
67c5lzkB_
not modelled 5.6 4
PDB header:structural genomics
Chain: B: PDB Molecule:protein fam83b;
PDBTitle: structure of the domain of unknown function duf1669 from human fam83b
68c4mveB_
not modelled 5.6 26
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of tcur_1030 protein from thermomonospora curvata
69d1fcda3
not modelled 5.6 19
Fold:CO dehydrogenase flavoprotein C-domain-like
Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
70c3juiA_
not modelled 5.5 8
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor eif-2b subunit epsilon;
PDBTitle: crystal structure of the c-terminal domain of human translation2 initiation factor eif2b epsilon subunit
71c6nbiP_
not modelled 5.3 80
PDB header:signaling protein
Chain: P: PDB Molecule:long-acting parathyroid hormone analog;
PDBTitle: cryo-em structure of parathyroid hormone receptor type 1 in complex2 with a long-acting parathyroid hormone analog and g protein
72c6q5lA_
not modelled 5.3 23
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24h;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24h
73c6q5lB_
not modelled 5.3 23
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24h;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24h
74c2i94B_
not modelled 5.3 67
PDB header:protein binding
Chain: B: PDB Molecule:rhodopsin kinase;
PDBTitle: nmr structure of recoverin bound to rhodopsin kinase
75c6q5hA_
not modelled 5.3 23
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24d;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24d
76c2l5bA_
not modelled 5.3 31
PDB header:apoptosis
Chain: A: PDB Molecule:activator of apoptosis harakiri;
PDBTitle: solution structure of the transmembrane domain of bcl-2 member2 harakiri in micelles
77c6q5iB_
not modelled 5.2 23
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24e;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24e
78c6q5mB_
not modelled 5.2 23
PDB header:de novo protein
Chain: B: PDB Molecule:cc-hex*-l24dab;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24dab
79c6q5kA_
not modelled 5.2 23
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24k;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24k
80c2qngA_
not modelled 5.2 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein sav2460;
PDBTitle: crystal structure of unknown function protein sav2460
81c6q5mA_
not modelled 5.2 23
PDB header:de novo protein
Chain: A: PDB Molecule:cc-hex*-l24dab;
PDBTitle: crystal structure of a cc-hex mutant that forms an antiparallel four-2 helix coiled coil cc-hex*-l24dab
82c2wuhD_
not modelled 5.1 83
PDB header:receptor/peptide
Chain: D: PDB Molecule:collagen peptide;
PDBTitle: crystal structure of the ddr2 discoidin domain bound to a2 triple-helical collagen peptide
83c4yk2B_
not modelled 5.1 14
PDB header:protein binding
Chain: B: PDB Molecule:bartonella effector protein (bep) substrate of virb t4ss;
PDBTitle: crystal structure of the bid domain of bep9 from bartonella2 clarridgeiae
84c2y5tF_
not modelled 5.1 83
PDB header:immune system
Chain: F: PDB Molecule:c1;
PDBTitle: crystal structure of the pathogenic autoantibody ciic1 in complex with2 the triple-helical c1 peptide
85c6a0aA_
not modelled 5.1 63
PDB header:structural protein
Chain: A: PDB Molecule:collagen type iii peptide;
PDBTitle: structure of a triple-helix region of human collagen type iii

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below