Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1810_(-)_2052940_2053296
DateFri Aug 2 13:30:42 BST 2019
Unique Job IDd45005dc3aada256
SequenceMQLQRTMGQC ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.716 Y:26.752 Z:30.055
Model (left) based on template c6c3rB_
Top template information
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
Confidence and coverage
Confidence: 63.7% Coverage: 25%
29 residues ( 25% of your sequence) have been modelled with 63.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6c3rB_



63.7 24
PDB header:viral protein
Chain: B: PDB Molecule:cricket paralysis virus 1a protein;
PDBTitle: cricket paralysis virus rnai suppressor protein crpv-1a
2d2csua3



22.4 25
Fold:Flavodoxin-like
Superfamily:Succinyl-CoA synthetase domains
Family:Succinyl-CoA synthetase domains
3c1vjqB_



16.9 30
PDB header:structural genomics, de novo protein
Chain: B: PDB Molecule:designed protein;
PDBTitle: designed protein based on backbone conformation of2 procarboxypeptidase-a (1aye) with sidechains chosen for maximal3 predicted stability.
4d1mkea1



16.6 22
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
5c2mp6A_



13.4 67
PDB header:signaling protein
Chain: A: PDB Molecule:suppressor of cytokine signaling 5;
PDBTitle: structure and function of the jak interaction region in the2 intrinsically disordered n-terminus of socs5
6c4inaA_



12.6 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q7mss8_wolsu protein from wolinella2 succinogenes. northeast structural genomics consortium target wsr35
7c4rl6A_



12.5 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:saccharopine dehydrogenase;
PDBTitle: crystal structure of the q04l03_strp2 protein from streptococcus2 pneumoniae. northeast structural genomics consortium target spr105
8c5uqdA_



11.9 44
PDB header:oxidoreductase
Chain: A: PDB Molecule:dumpy: shorter than wild-type;
PDBTitle: dpy-21 in complex with fe(ii) and alpha-ketoglutarate
9c5l78A_



11.7 32
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-aminoadipic semialdehyde synthase, mitochondrial;
PDBTitle: crystal structure of human aminoadipate semialdehyde synthase,2 saccharopine dehydrogenase domain (in nad+ bound form)
10c5k9xA_



11.2 24
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase alpha chain from legionella2 pneumophila subsp. pneumophila
11c2lweA_



10.3 13
PDB header:signaling protein
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx58;
PDBTitle: solution structure of mutant (t170e) second card of human rig-i
12c2ekcA_



9.4 21
PDB header:lyase
Chain: A: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5
13c3ss4C_



9.4 38
PDB header:hydrolase
Chain: C: PDB Molecule:glutaminase c;
PDBTitle: crystal structure of mouse glutaminase c, phosphate-bound form
14d1p9sa_



9.2 57
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
15d2duca1



9.1 57
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
16c3d23A_



8.7 57
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:3c-like proteinase;
PDBTitle: main protease of hcov-hku1
17d1lvoa_



8.1 43
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral cysteine protease of trypsin fold
18c4gicB_



8.1 50
PDB header:oxidoreductase
Chain: B: PDB Molecule:histidinol dehydrogenase;
PDBTitle: crystal structure of a putative histidinol dehydrogenase (target psi-2 014034) from methylococcus capsulatus
19c2q6fB_



8.1 57
PDB header:hydrolase
Chain: B: PDB Molecule:infectious bronchitis virus (ibv) main protease;
PDBTitle: crystal structure of infectious bronchitis virus (ibv) main protease2 in complex with a michael acceptor inhibitor n3
20c4xfqB_



7.8 43
PDB header:hydrolase
Chain: B: PDB Molecule:pedv main protease;
PDBTitle: crystal structure basis for pedv 3c like protease
21c2ynbA_



not modelled 7.7 43
PDB header:hydrolase
Chain: A: PDB Molecule:3c-like proteinase;
PDBTitle: crystal structure of the main protease of coronavirus hku4 in complex2 with a michael acceptor sg85
22c2ifsA_



not modelled 7.7 22
PDB header:signaling protein
Chain: A: PDB Molecule:wiskott-aldrich syndrome protien interacting protein and
PDBTitle: structure of the n-wasp evh1 domain in complex with an extended wip2 peptide
23c4v19S_



not modelled 7.6 18
PDB header:ribosome
Chain: S: PDB Molecule:mitoribosomal protein ul18m, mrpl18;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
24c3tloA_



not modelled 7.4 43
PDB header:hydrolase
Chain: A: PDB Molecule:3c-like proteinase;
PDBTitle: crystal structure of hcov-nl63 3c-like protease
25c2kktA_



not modelled 7.0 38
PDB header:transcription
Chain: A: PDB Molecule:ataxin-7-like protein 3;
PDBTitle: solution structure of the sca7 domain of human ataxin-7-l3 protein
26c5us3A_



not modelled 6.6 100
PDB header:de novo protein
Chain: A: PDB Molecule:heterogeneous-backbone variant of the sp1-3 zinc finger: n-
PDBTitle: heterogeneous-backbone foldamer mimic of the sp1-3 zinc finger
27d1xoda1



not modelled 6.4 18
Fold:PH domain-like barrel
Superfamily:PH domain-like
Family:Enabled/VASP homology 1 domain (EVH1 domain)
28c1zi7C_



not modelled 6.4 40
PDB header:lipid binding protein
Chain: C: PDB Molecule:kes1 protein;
PDBTitle: structure of truncated yeast oxysterol binding protein osh4
29c5vldC_



not modelled 6.2 60
PDB header:oxidoreductase
Chain: C: PDB Molecule:histidinol dehydrogenase, chloroplastic;
PDBTitle: crystal structure of medicago truncatula l-histidinol dehydrogenase in2 complex with l-histidine and nad+
30c2v75A_



not modelled 6.2 25
PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein nab2;
PDBTitle: n-terminal domain of nab2
31c3uo9B_



not modelled 6.2 38
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial;
PDBTitle: crystal structure of human gac in complex with glutamate and bptes
32d1k75a_



not modelled 6.1 60
Fold:ALDH-like
Superfamily:ALDH-like
Family:L-histidinol dehydrogenase HisD
33c2djcA_



not modelled 6.1 60
PDB header:cytokine
Chain: A: PDB Molecule:growth-blocking peptide;
PDBTitle: solution structure of growth-blocking peptide of the2 tobacco cutworm, spodoptera litura
34c1b5nA_



not modelled 5.9 60
PDB header:signaling protein
Chain: A: PDB Molecule:protein (plasmatocyte-spreading peptide);
PDBTitle: nmr structure of psp1, plasmatocyte-spreading peptide from2 pseudoplusia includens
35c1b1vA_



not modelled 5.9 60
PDB header:cytokine
Chain: A: PDB Molecule:protein (plasmatocyte-spreading peptide);
PDBTitle: nmr structure of psp1, plasmatocyte-spreading peptide from2 pseudoplusia includens
36c5uqeB_



not modelled 5.9 38
PDB header:hydrolase
Chain: B: PDB Molecule:glutaminase kidney isoform, mitochondrial;
PDBTitle: multidomain structure of human kidney-type glutaminase(kga/gls)
37c1irrA_



not modelled 5.9 60
PDB header:cytokine
Chain: A: PDB Molecule:paralytic peptide;
PDBTitle: solution structure of paralytic peptide of the silkworm,2 bombyx mori
38c1bonB_



not modelled 5.8 50
PDB header:hormone
Chain: B: PDB Molecule:bombyxin-ii,bombyxin a-6;
PDBTitle: three-dimensional structure of bombyxin-ii, an insulin-2 related brain-secretory peptide of the silkmoth bombyx3 mori: comparison with insulin and relaxin
39c2mulA_



not modelled 5.7 67
PDB header:protein binding
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase huwe1;
PDBTitle: solution structure of the ubm1 domain of human huwe1/arf-bp1
40d1zhxa1



not modelled 5.7 40
Fold:Oxysterol-binding protein-like
Superfamily:Oxysterol-binding protein-like
Family:Oxysterol-binding protein
41c1bomB_



not modelled 5.6 50
PDB header:insulin-like brain-secretory peptide
Chain: B: PDB Molecule:bombyxin-ii,bombyxin a-6;
PDBTitle: three-dimensional structure of bombyxin-ii, an insulin-2 related brain-secretory peptide of the silkmoth bombyx3 mori: comparison with insulin and relaxin
42c6driA_



not modelled 5.6 67
PDB header:immune system
Chain: A: PDB Molecule:acan1;
PDBTitle: nmr solution structure of acan1 from the ancylostoma caninum hookworm
43c4g07A_



not modelled 5.6 40
PDB header:oxidoreductase
Chain: A: PDB Molecule:histidinol dehydrogenase;
PDBTitle: the crystal structure of the c366s mutant of hdh from brucella suis
44c3pvsA_



not modelled 5.6 17
PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
45c5tchG_



not modelled 5.4 26
PDB header:lyase
Chain: G: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of tryptophan synthase from m. tuberculosis -2 ligand-free form, trpa-g66v mutant
46c2ffwA_



not modelled 5.3 50
PDB header:ligase
Chain: A: PDB Molecule:midline-1;
PDBTitle: solution structure of the rbcc/trim b-box1 domain of human2 mid1: b-box with a ring
47c2dj9A_



not modelled 5.3 60
PDB header:cytokine
Chain: A: PDB Molecule:growth-blocking peptide;
PDBTitle: solution structure of growth-blocking peptide of the2 cabbage armyworm, mamestra brassicae
48c1hrlA_



not modelled 5.2 60
PDB header:toxin
Chain: A: PDB Molecule:paralytic peptide i;
PDBTitle: structure of a paralytic peptide from an insect, manduca sexta
49d2j9ga2



not modelled 5.2 11
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
50c6hv6A_



not modelled 5.2 17
PDB header:toxin
Chain: A: PDB Molecule:toxin pau_02230;
PDBTitle: crystal structure of patoxp, a cysteine protease-like domain of2 photorhabdus asymbiotica toxin patox
51d1ulza2



not modelled 5.2 22
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
52c6an0A_



not modelled 5.2 60
PDB header:oxidoreductase
Chain: A: PDB Molecule:histidinol dehydrogenase;
PDBTitle: crystal structure of histidinol dehydrogenase from elizabethkingia2 anophelis

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below