Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1811_(mgtC)_2053450_2054154
DateFri Aug 2 13:30:42 BST 2019
Unique Job IDc7ef0b31138e3b35
SequenceMQTLTVADFA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:30.829 Y:40.733 Z:30.484
Model (left) based on template c2lqjA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:mg2+ transport protein;
PDBTitle: solution structure of the c-terminal domain of the mgtc protein from2 mycobacterium tuberculosis
Confidence and coverage
Confidence: 99.5% Coverage: 40%
94 residues ( 40% of your sequence) have been modelled with 99.5% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2lqjA_



99.5 100
PDB header:hydrolase
Chain: A: PDB Molecule:mg2+ transport protein;
PDBTitle: solution structure of the c-terminal domain of the mgtc protein from2 mycobacterium tuberculosis
2c3ibwA_



97.2 19
PDB header:transferase
Chain: A: PDB Molecule:gtp pyrophosphokinase;
PDBTitle: crystal structure of the act domain from gtp pyrophosphokinase of2 chlorobium tepidum. northeast structural genomics consortium target3 ctr148a
3d1u8sa2



96.2 13
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Glycine cleavage system transcriptional repressor
4c2lvwA_



95.4 14
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase isozyme 1 small subunit;
PDBTitle: solution nmr studies of the dimeric regulatory subunit ilvn of the2 e.coli acetohydroxyacid synthase i (ahas i)
5d1sc6a3



93.1 7
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
6d1ygya3



93.1 6
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
7c1y7pB_



92.9 5
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein af1403;
PDBTitle: 1.9 a crystal structure of a protein of unknown function2 af1403 from archaeoglobus fulgidus, probable metabolic3 regulator
8d1phza1



92.7 20
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Phenylalanine metabolism regulatory domain
9d2qmwa2



92.6 12
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Phenylalanine metabolism regulatory domain
10c4lubA_



91.7 10
PDB header:lyase
Chain: A: PDB Molecule:putative prephenate dehydratase;
PDBTitle: x-ray structure of prephenate dehydratase from streptococcus mutans
11d2f1fa1



89.1 14
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
12c2fgcA_



88.7 10
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase, small subunit;
PDBTitle: crystal structure of acetolactate synthase- small subunit from2 thermotoga maritima
13c2phmA_



88.0 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein (phenylalanine-4-hydroxylase);
PDBTitle: structure of phenylalanine hydroxylase dephosphorylated
14c2f1fA_



87.0 14
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase isozyme iii small subunit;
PDBTitle: crystal structure of the regulatory subunit of acetohydroxyacid2 synthase isozyme iii from e. coli
15d2fgca2



86.6 11
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
16d2pc6a2



86.4 12
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
17d1rwua_



85.4 14
Fold:Ferredoxin-like
Superfamily:YbeD/HP0495-like
Family:YbeD-like
18c1rwuA_



85.4 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical upf0250 protein ybed;
PDBTitle: solution structure of conserved protein ybed from e. coli
19d1zpva1



84.8 10
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:SP0238-like
20c3mwbA_



84.7 20
PDB header:lyase
Chain: A: PDB Molecule:prephenate dehydratase;
PDBTitle: the crystal structure of prephenate dehydratase in complex with l-phe2 from arthrobacter aurescens to 2.0a
21c2qmwA_



not modelled 83.2 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:prephenate dehydratase;
PDBTitle: the crystal structure of the prephenate dehydratase (pdt) from2 staphylococcus aureus subsp. aureus mu50
22c2pc6C_



not modelled 82.6 13
PDB header:lyase
Chain: C: PDB Molecule:probable acetolactate synthase isozyme iii (small subunit);
PDBTitle: crystal structure of putative acetolactate synthase- small subunit2 from nitrosomonas europaea
23c5denA_



not modelled 81.2 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:phenylalanine-4-hydroxylase;
PDBTitle: the first structure of a full-length mammalian phenylalanine2 hydroxylase reveals the architecture of an auto-inhibited tetramer
24c6mk7A_



not modelled 80.2 13
PDB header:membrane protein
Chain: A: PDB Molecule:cell division protein ftsx;
PDBTitle: solution structure of the large extracellular loop of ftsx in2 streptococcus pneumoniae
25c5jk5A_



not modelled 73.3 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:phenylalanine-4-hydroxylase;
PDBTitle: phenylalanine hydroxylase from dictyostelium - bh2 complex
26c1ygyA_



not modelled 72.7 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis
27c2mdaB_



not modelled 70.0 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:tyrosine 3-monooxygenase;
PDBTitle: the solution structure of the regulatory domain of tyrosine2 hydroxylase
28c2qmxB_



not modelled 64.9 12
PDB header:ligase
Chain: B: PDB Molecule:prephenate dehydratase;
PDBTitle: the crystal structure of l-phe inhibited prephenate dehydratase from2 chlorobium tepidum tls
29c4n8oA_



not modelled 64.3 21
PDB header:membrane protein
Chain: A: PDB Molecule:cell division protein ftsx;
PDBTitle: crystal structure of mycobacterial ftsx extracellular domain, bromide2 derivative
30c4qo6A_



not modelled 50.8 17
PDB header:structural protein
Chain: A: PDB Molecule:adenylate cyclase-like protein;
PDBTitle: structural studies of cdsd, a structural protein of the type iii2 secretion system (ttss) of chlamydia trachomatis
31c3n0vD_



not modelled 47.0 2
PDB header:hydrolase
Chain: D: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution
32c2yy3B_



not modelled 46.7 8
PDB header:translation
Chain: B: PDB Molecule:elongation factor 1-beta;
PDBTitle: crystal structure of translation elongation factor ef-1 beta from2 pyrococcus horikoshii
33d2cg4a2



not modelled 44.5 10
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
34c3luyA_



not modelled 44.4 8
PDB header:isomerase
Chain: A: PDB Molecule:probable chorismate mutase;
PDBTitle: putative chorismate mutase from bifidobacterium adolescentis
35c1u8sB_



not modelled 40.8 12
PDB header:transcription
Chain: B: PDB Molecule:glycine cleavage system transcriptional
PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor
36d2cyya2



not modelled 37.4 14
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
37c4f3qA_



not modelled 34.7 16
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein cbu_1566;
PDBTitle: structure of a yebc family protein (cbu_1566) from coxiella burnetii
38d2joqa1



not modelled 33.4 8
Fold:Ferredoxin-like
Superfamily:YbeD/HP0495-like
Family:HP0495-like
39c3k5pA_



not modelled 28.0 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis
40d1u8sa1



not modelled 27.5 13
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Glycine cleavage system transcriptional repressor
41c2bj3D_



not modelled 24.4 9
PDB header:transcription
Chain: D: PDB Molecule:nickel responsive regulator;
PDBTitle: nikr-apo
42c2ew9A_



not modelled 24.1 13
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: solution structure of apowln5-6
43d1kona_



not modelled 23.9 12
Fold:YebC-like
Superfamily:YebC-like
Family:YebC-like
44c2jsxA_



not modelled 23.7 11
PDB header:chaperone
Chain: A: PDB Molecule:protein napd;
PDBTitle: solution structure of the e. coli tat proofreading2 chaperone protein napd
45c4g1uB_



not modelled 22.8 25
PDB header:transport protein/hydrolase
Chain: B: PDB Molecule:hemin transport system permease protein hmuu;
PDBTitle: x-ray structure of the bacterial heme transporter hmuuv from yersinia2 pestis
46d1q5ya_



not modelled 21.1 11
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Nickel responsive regulator NikR, C-terminal domain
47c2nuuF_



not modelled 20.8 20
PDB header:transport protein/signaling protein
Chain: F: PDB Molecule:ammonia channel;
PDBTitle: regulating the escherichia coli ammonia channel: the crystal structure2 of the amtb-glnk complex
48c1q5vB_



not modelled 19.5 10
PDB header:transcription
Chain: B: PDB Molecule:nickel responsive regulator;
PDBTitle: apo-nikr
49d1lfpa_



not modelled 18.3 9
Fold:YebC-like
Superfamily:YebC-like
Family:YebC-like
50c5a40C_



not modelled 18.1 15
PDB header:transport protein
Chain: C: PDB Molecule:putative fluoride ion transporter crcb;
PDBTitle: crystal structure of a dual topology fluoride ion channel.
51d2nzca1



not modelled 16.9 11
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:TM1266-like
52c2ltmA_



not modelled 16.4 18
PDB header:electron transport
Chain: A: PDB Molecule:nfu1 iron-sulfur cluster scaffold homolog, mitochondrial;
PDBTitle: solution nmr structure of nfu1 iron-sulfur cluster scaffold homolog2 from homo sapiens, northeast structural genomics consortium (nesg)3 target hr2876b
53c4czdD_



not modelled 16.2 6
PDB header:lyase
Chain: D: PDB Molecule:putative transcriptional regulator, asnc family;
PDBTitle: sirohaem decarboxylase ahba/b - an enzyme with structural homology2 to the lrp/asnc transcription factor family that is part of the3 alternative haem biosynthesis pathway.
54c6hwhB_



not modelled 15.1 11
PDB header:electron transport
Chain: B: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
55c6p2rB_



not modelled 14.7 10
PDB header:transferase
Chain: B: PDB Molecule:dolichyl-phosphate-mannose--protein mannosyltransferase 2;
PDBTitle: structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt22 complex bound to the sugar donor
56c2e1cA_



not modelled 14.3 14
PDB header:transcription/dna
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519;
PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex
57d1gh8a_



not modelled 13.8 16
Fold:Ferredoxin-like
Superfamily:eEF-1beta-like
Family:eEF-1beta-like
58c2k1hA_



not modelled 13.5 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ser13;
PDBTitle: solution nmr structure of ser13 from staphylococcus epidermidis.2 northeast structural genomics consortium target ser13
59c2mi2A_



not modelled 13.3 16
PDB header:transport protein
Chain: A: PDB Molecule:sec-independent protein translocase protein tatb;
PDBTitle: solution structure of the e. coli tatb protein in dpc micelles
60c2vbzA_



not modelled 13.0 18
PDB header:dna-binding protein
Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan
61c2dtjA_



not modelled 13.0 7
PDB header:transferase
Chain: A: PDB Molecule:aspartokinase;
PDBTitle: crystal structure of regulatory subunit of aspartate kinase2 from corynebacterium glutamicum
62c4alzA_



not modelled 12.8 11
PDB header:membrane protein
Chain: A: PDB Molecule:yop proteins translocation protein d;
PDBTitle: the yersinia t3ss basal body component yscd reveals a different2 structural periplasmatic domain organization to known homologue prgh
63d2ffma1



not modelled 12.5 11
Fold:Hypothetical protein SAV1430
Superfamily:Hypothetical protein SAV1430
Family:Hypothetical protein SAV1430
64c2cg4B_



not modelled 12.2 11
PDB header:transcription
Chain: B: PDB Molecule:regulatory protein asnc;
PDBTitle: structure of e.coli asnc
65d1i1ga2



not modelled 12.2 10
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
66c6exxA_



not modelled 12.2 9
PDB header:rna binding protein
Chain: A: PDB Molecule:protein pes4;
PDBTitle: crystal structure of pes4 rrm4
67c3o1lB_



not modelled 11.9 9
PDB header:hydrolase
Chain: B: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution
68c5nwvA_



not modelled 11.8 31
PDB header:viral protein
Chain: A: PDB Molecule:scrfp-tag,gp41;
PDBTitle: nmr assignment and structure of a peptide derived from the fusion2 peptide of hiv-1 gp41 in the presence of dodecylphosphocholine3 micelles
69c6fu9A_



not modelled 11.4 8
PDB header:antifungal protein
Chain: A: PDB Molecule:nbs-lrr class disease resistance protein;
PDBTitle: complex of rice blast (magnaporthe oryzae) effector protein avr-pikd2 with the hma domain of pikm-1 from rice (oryza sativa)
70c5zneA_



not modelled 10.6 11
PDB header:plant protein
Chain: A: PDB Molecule:nbs-lrr type protein;
PDBTitle: the crystal structure of immune receptor rga5a_s of resistance protein2 pia from rice (oryza sativa)
71c3louB_



not modelled 10.5 11
PDB header:hydrolase
Chain: B: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution
72d2guka1



not modelled 10.2 23
Fold:PG1857-like
Superfamily:PG1857-like
Family:PG1857-like
73d1lk5a2



not modelled 9.6 20
Fold:Ferredoxin-like
Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain
Family:D-ribose-5-phosphate isomerase (RpiA), lid domain
74c5svtA_



not modelled 9.5 18
PDB header:membrane protein
Chain: A: PDB Molecule:p2x purinoceptor 3;
PDBTitle: anomalous cs+ signal reveals the site of na+ ion entry to the channel2 pore of the human p2x3 ion channel through the extracellular3 fenestrations
75d2qifa1



not modelled 9.5 25
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
76c2e7xA_



not modelled 9.3 15
PDB header:transcription regulator
Chain: A: PDB Molecule:150aa long hypothetical transcriptional regulator;
PDBTitle: structure of the lrp/asnc like transcriptional regulator from2 sulfolobus tokodaii 7 complexed with its cognate ligand
77c5a43B_



not modelled 9.2 11
PDB header:transport protein
Chain: B: PDB Molecule:putative fluoride ion transporter crcb;
PDBTitle: crystal structure of a dual topology fluoride ion channel.
78d1o8ba2



not modelled 8.6 15
Fold:Ferredoxin-like
Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain
Family:D-ribose-5-phosphate isomerase (RpiA), lid domain
79c2ls4A_



not modelled 8.4 28
PDB header:metal transport
Chain: A: PDB Molecule:high affinity copper uptake protein 1;
PDBTitle: 1h chemical shift assignments for the third transmembrane domain from2 the human copper transport 1
80c6iu3A_



not modelled 8.2 17
PDB header:metal transport
Chain: A: PDB Molecule:vit1;
PDBTitle: crystal structure of iron transporter vit1 with zinc ions
81c2e1aD_



not modelled 8.2 10
PDB header:transcription
Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc;
PDBTitle: crystal structure of ffrp-dm1
82c3s1tB_



not modelled 7.9 6
PDB header:transferase
Chain: B: PDB Molecule:aspartokinase;
PDBTitle: structure of the regulatory domain of aspartokinase (rv3709c; ak-beta)2 in complex with threonine from mycobacterium tuberculosis
83d2bj7a2



not modelled 7.9 10
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Nickel responsive regulator NikR, C-terminal domain
84c5a6wA_



not modelled 7.8 11
PDB header:antiviral protein
Chain: A: PDB Molecule:resistance protein pikp-1;
PDBTitle: complex of rice blast (magnaporthe oryzae) effector protein avr-pikd2 with the hma domain of pikp1 from rice (oryza sativa)
85c2djwF_



not modelled 7.8 10
PDB header:unknown function
Chain: F: PDB Molecule:probable transcriptional regulator, asnc family;
PDBTitle: crystal structure of ttha0845 from thermus thermophilus hb8
86d1p6ta2



not modelled 7.7 16
Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
87c2ga7A_



not modelled 7.6 15
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the copper(i) form of the third metal-2 binding domain of atp7a protein (menkes disease protein)
88c2y3yC_



not modelled 7.6 11
PDB header:transcription
Chain: C: PDB Molecule:putative nickel-responsive regulator;
PDBTitle: holo-ni(ii) hpnikr is a symmetric tetramer containing four canonic2 square-planar ni(ii) ions at physiological ph
89c4k0eA_



not modelled 7.6 12
PDB header:transport protein
Chain: A: PDB Molecule:heavy metal cation tricomponent efflux pump znea(czca-
PDBTitle: x-ray crystal structure of a heavy metal efflux pump, crystal form ii
90c2pjmA_



not modelled 7.5 19
PDB header:isomerase
Chain: A: PDB Molecule:ribose-5-phosphate isomerase a;
PDBTitle: structure of ribose 5-phosphate isomerase a from2 methanocaldococcus jannaschii
91c5f1cA_



not modelled 7.5 32
PDB header:membrane protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of an invertebrate p2x receptor from the gulf coast2 tick in the presence of atp and zn2+ ion at 2.9 angstroms
92c1lk5C_



not modelled 7.3 15
PDB header:isomerase
Chain: C: PDB Molecule:d-ribose-5-phosphate isomerase;
PDBTitle: structure of the d-ribose-5-phosphate isomerase from2 pyrococcus horikoshii
93c6cfwB_



not modelled 7.2 14
PDB header:membrane protein
Chain: B: PDB Molecule:monovalent cation/h+ antiporter subunit f;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
94c2zbcH_



not modelled 7.1 15
PDB header:transcription
Chain: H: PDB Molecule:83aa long hypothetical transcriptional regulator asnc;
PDBTitle: crystal structure of sts042, a stand-alone ram module protein, from2 hyperthermophilic archaeon sulfolobus tokodaii strain7.
95c3nrbD_



not modelled 7.1 7
PDB header:hydrolase
Chain: D: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution
96c2l3mA_



not modelled 7.0 16
PDB header:metal binding protein
Chain: A: PDB Molecule:copper-ion-binding protein;
PDBTitle: solution structure of the putative copper-ion-binding protein from2 bacillus anthracis str. ames
97c5o7jA_



not modelled 6.8 30
PDB header:signaling protein
Chain: A: PDB Molecule:histidine kinase;
PDBTitle: structural insights into the periplasmic sensor domain of the gacs2 histidine kinase controlling biofilm formation in pseudomonas3 aeruginosa
98c2crlA_



not modelled 6.7 13
PDB header:chaperone
Chain: A: PDB Molecule:copper chaperone for superoxide dismutase;
PDBTitle: the apo form of hma domain of copper chaperone for2 superoxide dismutase
99c2kncA_



not modelled 6.6 11
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex

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Transmembrane helix prediction 

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