Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1823_(-)_2069709_2070632
DateFri Aug 2 13:30:43 BST 2019
Unique Job IDfe93e783060f7040
SequenceVAESDRLLGG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.332 Y:40.702 Z:52.937
Model (left) based on template c3gmgB_
Top template information
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein rv1825/mt1873;
PDBTitle: crystal structure of an uncharacterized conserved protein from2 mycobacterium tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 45%
137 residues ( 45% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3gmgB_
100.0 30
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein rv1825/mt1873;
PDBTitle: crystal structure of an uncharacterized conserved protein from2 mycobacterium tuberculosis
2c3iynQ_
77.5 24
PDB header:virus
Chain: Q: PDB Molecule:hexon-associated protein;
PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5
3c5lskB_
75.5 20
PDB header:cell cycle
Chain: B: PDB Molecule:polyamine-modulated factor 1;
PDBTitle: crystal structure of the human kinetochore mis12-cenp-c complex
4c5fv8B_
72.5 13
PDB header:structural protein
Chain: B: PDB Molecule:fosw;
PDBTitle: structure of cjun-fosw coiled coil complex.
5c5fv8A_
72.4 13
PDB header:structural protein
Chain: A: PDB Molecule:fosw;
PDBTitle: structure of cjun-fosw coiled coil complex.
6d1nh8a2
70.5 29
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
7c5wwlN_
69.0 10
PDB header:cell cycle
Chain: N: PDB Molecule:kinetochore protein nnf1;
PDBTitle: crystal structure of the schizogenesis pombe kinetochore mis12c2 subcomplex
8c2vd3B_
66.3 18
PDB header:transferase
Chain: B: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: the structure of histidine inhibited hisg from2 methanobacterium thermoautotrophicum
9c1junB_
65.6 21
PDB header:transcription regulation
Chain: B: PDB Molecule:c-jun homodimer;
PDBTitle: nmr study of c-jun homodimer
10c3iynR_
64.8 14
PDB header:virus
Chain: R: PDB Molecule:hexon-associated protein;
PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5
11c4yb5B_
64.0 21
PDB header:transferase
Chain: B: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: adenosine triphosphate phosphoribosyltransferase from campylobacter2 jejuni in complex with the allosteric inhibitor histidine
12c1nh7A_
60.8 29
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: atp phosphoribosyltransferase (atp-prtase) from mycobacterium2 tuberculosis
13c2oqqB_
58.7 25
PDB header:transcription
Chain: B: PDB Molecule:transcription factor hy5;
PDBTitle: crystal structure of hy5 leucine zipper homodimer from arabidopsis2 thaliana
14c2xdjC_
55.3 12
PDB header:unknown function
Chain: C: PDB Molecule:uncharacterized protein ybgf;
PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf
15d1vioa2
55.0 10
Fold:Alpha-L RNA-binding motif
Superfamily:Alpha-L RNA-binding motif
Family:Pseudouridine synthase RsuA N-terminal domain
16c3m9bK_
54.4 20
PDB header:chaperone
Chain: K: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
17c6czlA_
54.2 12
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase catalytic subunit;
PDBTitle: crystal structure of medicago truncatula atp-phosphoribosyltransferase2 in relaxed form
18c4clvB_
54.1 10
PDB header:metal binding protein
Chain: B: PDB Molecule:nickel-cobalt-cadmium resistance protein nccx;
PDBTitle: crystal structure of dodecylphosphocholine-solubilized nccx2 from cupriavidus metallidurans 31a
19c3ghgK_
51.4 12
PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
20d1qfha1
50.2 17
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Filamin repeat (rod domain)
21c3n4xB_
not modelled 49.0 10
PDB header:replication
Chain: B: PDB Molecule:monopolin complex subunit csm1;
PDBTitle: structure of csm1 full-length
22c3cvfA_
not modelled 48.7 16
PDB header:signaling protein
Chain: A: PDB Molecule:homer protein homolog 3;
PDBTitle: crystal structure of the carboxy terminus of homer3
23c3u1aC_
not modelled 47.8 9
PDB header:contractile protein
Chain: C: PDB Molecule:smooth muscle tropomyosin alpha;
PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha
24c5mg8B_
not modelled 47.6 9
PDB header:recombination
Chain: B: PDB Molecule:structural maintenance of chromosomes protein 6;
PDBTitle: crystal structure of the s.pombe smc5/6 hinge domain
25c4pxjB_
not modelled 47.5 11
PDB header:protein binding
Chain: B: PDB Molecule:c-jun-amino-terminal kinase-interacting protein 3;
PDBTitle: crystallographic structure of the lzii fragment (anti-parallel2 orientation) from jip3
26d1h3da2
not modelled 46.8 17
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
27c6e2jB_
not modelled 44.1 15
PDB header:protein fibril
Chain: B: PDB Molecule:keratin, type i cytoskeletal 10;
PDBTitle: crystal structure of the heterocomplex between human keratin 1 coil 1b2 containing s233l mutation and wild-type human keratin 10 coil 1b
28c4cgkA_
not modelled 43.8 19
PDB header:cell cycle
Chain: A: PDB Molecule:secreted 45 kda protein;
PDBTitle: crystal structure of the essential protein pcsb from streptococcus2 pneumoniae
29c6a9pD_
not modelled 43.5 15
PDB header:structural protein
Chain: D: PDB Molecule:glial fibrillary acidic protein;
PDBTitle: crystal structure of the human glial fibrillary acidic protein 1b2 domain
30c1ei3E_
not modelled 42.1 14
PDB header:blood clotting
Chain: E: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
31c2w83C_
not modelled 41.5 11
PDB header:protein transport
Chain: C: PDB Molecule:c-jun-amino-terminal kinase-interacting protein
PDBTitle: crystal structure of the arf6 gtpase in complex with a2 specific effector, jip4
32c2gl2B_
not modelled 40.9 13
PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,y69g) of2 bacterial adhesin fada
33c1fosE_
not modelled 39.6 12
PDB header:transcription/dna
Chain: E: PDB Molecule:p55-c-fos proto-oncogene protein;
PDBTitle: two human c-fos:c-jun:dna complexes
34c6e1rA_
not modelled 39.2 35
PDB header:hydrolase
Chain: A: PDB Molecule:tailspike protein;
PDBTitle: crystal structure of the acinetobacter phage vb_apip_p1 tailspike2 protein
35c1fosF_
not modelled 38.9 23
PDB header:transcription/dna
Chain: F: PDB Molecule:c-jun proto-oncogene protein;
PDBTitle: two human c-fos:c-jun:dna complexes
36c2e43A_
not modelled 38.8 18
PDB header:transcription/dna
Chain: A: PDB Molecule:ccaat/enhancer-binding protein beta;
PDBTitle: crystal structure of c/ebpbeta bzip homodimer k269a mutant2 bound to a high affinity dna fragment
37c1deqO_
not modelled 38.6 13
PDB header:blood clotting
Chain: O: PDB Molecule:fibrinogen (beta chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
38c3ojaB_
not modelled 38.0 16
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
39c6ec0A_
not modelled 37.9 11
PDB header:protein fibril
Chain: A: PDB Molecule:keratin 1;
PDBTitle: crystal structure of the wild-type heterocomplex between coil 1b2 domains of human intermediate filament proteins keratin 1 (krt1) and3 keratin 10 (krt10)
40c1cz7C_
not modelled 37.1 14
PDB header:contractile protein
Chain: C: PDB Molecule:microtubule motor protein ncd;
PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations
41c2o7hF_
not modelled 37.0 19
PDB header:transcription
Chain: F: PDB Molecule:general control protein gcn4;
PDBTitle: crystal structure of trimeric coiled coil gcn4 leucine zipper
42c1swiA_
not modelled 36.3 19
PDB header:leucine zipper
Chain: A: PDB Molecule:gcn4p1;
PDBTitle: gcn4-leucine zipper core mutant as n16a complexed with benzene
43c1rb6C_
not modelled 36.3 19
PDB header:dna binding protein
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: antiparallel trimer of gcn4-leucine zipper core mutant as n16a2 tetragonal form
44c3swkB_
not modelled 36.2 11
PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin coil1b fragment
45c3kinB_
not modelled 35.9 9
PDB header:motor protein
Chain: B: PDB Molecule:kinesin heavy chain;
PDBTitle: kinesin (dimeric) from rattus norvegicus
46c1ij3B_
not modelled 35.8 15
PDB header:transcription
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
47c5xauC_
not modelled 35.7 8
PDB header:cell adhesion
Chain: C: PDB Molecule:laminin subunit gamma-1;
PDBTitle: crystal structure of integrin binding fragment of laminin-511
48c1ij2C_
not modelled 33.5 18
PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
49c4u5tB_
not modelled 33.4 19
PDB header:transcription/transcription inhibitor
Chain: B: PDB Molecule:vbp leucine zipper;
PDBTitle: crystal structure of vbp leucine zipper with bound arylstibonic acid
50c3tnuA_
not modelled 33.4 8
PDB header:cytosolic protein
Chain: A: PDB Molecule:keratin, type i cytoskeletal 14;
PDBTitle: heterocomplex of coil 2b domains of human intermediate filament2 proteins, keratin 5 (krt5) and keratin 14 (krt14)
51c1rb1A_
not modelled 33.3 21
PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
52c3k7zA_
not modelled 33.3 21
PDB header:dna binding protein
Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
53c3k7zB_
not modelled 33.3 21
PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
54c1rb1B_
not modelled 33.3 21
PDB header:dna binding protein
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-leucine zipper core mutant as n16a trigonal automatic2 solution
55c1ij3C_
not modelled 32.8 18
PDB header:transcription
Chain: C: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
56c1t2kD_
not modelled 32.5 15
PDB header:transcription/dna
Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2;
PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna
57c3ol1A_
not modelled 32.4 11
PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b
58c1ci6A_
not modelled 32.2 12
PDB header:transcription
Chain: A: PDB Molecule:transcription factor atf-4;
PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer
59c2cqjA_
not modelled 32.1 13
PDB header:rna binding protein
Chain: A: PDB Molecule:u3 small nucleolar ribonucleoprotein protein
PDBTitle: solution structure of the s4 domain of u3 small nucleolar2 ribonucleoprotein protein imp3 homolog
60c5mg8A_
not modelled 31.8 12
PDB header:recombination
Chain: A: PDB Molecule:structural maintenance of chromosomes protein 5;
PDBTitle: crystal structure of the s.pombe smc5/6 hinge domain
61c1debA_
not modelled 30.8 10
PDB header:structural protein
Chain: A: PDB Molecule:adenomatous polyposis coli protein;
PDBTitle: crystal structure of the n-terminal coiled coil domain from apc
62c1ij2B_
not modelled 30.6 18
PDB header:transcription
Chain: B: PDB Molecule:general control protein gcn4;
PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
63c4ug1A_
not modelled 30.0 10
PDB header:cell cycle
Chain: A: PDB Molecule:cell cycle protein gpsb;
PDBTitle: gpsb n-terminal domain
64c3ra3D_
not modelled 29.8 15
PDB header:de novo protein
Chain: D: PDB Molecule:p2f;
PDBTitle: crystal structure of a section of a de novo design gigadalton protein2 fibre
65d1ryba_
not modelled 29.8 15
Fold:Phosphorylase/hydrolase-like
Superfamily:Peptidyl-tRNA hydrolase-like
Family:Peptidyl-tRNA hydrolase-like
66c5t58B_
not modelled 29.8 5
PDB header:cell cycle
Chain: B: PDB Molecule:klla0e05809p;
PDBTitle: structure of the mind complex shows a regulatory focus of yeast2 kinetochore assembly
67c1q1kA_
not modelled 29.0 17
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: structure of atp-phosphoribosyltransferase from e. coli complexed with2 pr-atp
68c3a5tB_
not modelled 28.3 18
PDB header:transcription regulator/dna
Chain: B: PDB Molecule:transcription factor mafg;
PDBTitle: crystal structure of mafg-dna complex
69c1ztaA_
not modelled 27.7 16
PDB header:dna-binding motif
Chain: A: PDB Molecule:leucine zipper monomer;
PDBTitle: the solution structure of a leucine-zipper motif peptide
70c1ci6B_
not modelled 26.9 16
PDB header:transcription
Chain: B: PDB Molecule:transcription factor c/ebp beta;
PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer
71c4w7yB_
not modelled 26.7 10
PDB header:transport protein
Chain: B: PDB Molecule:b-cell receptor-associated protein 29;
PDBTitle: dimeric bap29 vded with disulfide bonds in crystal contacts
72c6gajA_
not modelled 25.1 14
PDB header:viral protein
Chain: A: PDB Molecule:outer capsid protein sigma-1;
PDBTitle: crystal structure of the t1l reovirus sigma1 coiled coil tail (iodide)
73c1kskA_
not modelled 24.1 16
PDB header:lyase
Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a;
PDBTitle: structure of rsua
74d1vc4a_
not modelled 24.1 27
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Tryptophan biosynthesis enzymes
75c1deqF_
not modelled 24.0 10
PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen (gamma chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
76c5w3dB_
not modelled 23.9 13
PDB header:motor protein
Chain: B: PDB Molecule:protein claret segregational;
PDBTitle: the structure of kinesin-14 wild-type ncd-adp dimer
77c6f1tX_
not modelled 23.8 15
PDB header:motor protein
Chain: X: PDB Molecule:bicd family-like cargo adapter 1,bicd family-like cargo
PDBTitle: cryo-em structure of two dynein tail domains bound to dynactin and2 bicdr1
78c6ewyA_
not modelled 23.8 15
PDB header:structural protein
Chain: A: PDB Molecule:peptidoglycan endopeptidase ripa;
PDBTitle: ripa peptidoglycan hydrolase (rv1477, mycobacterium tuberculosis) n-2 terminal domain
79c2z5wA_
not modelled 23.5 37
PDB header:structural protein
Chain: A: PDB Molecule:bcla protein;
PDBTitle: tbcla, a recombinant spore surface protein from bacillus anthracis
80c5j0kA_
not modelled 23.3 17
PDB header:de novo protein
Chain: A: PDB Molecule:designed protein 2l4hc2_23;
PDBTitle: de novo design of protein homo-oligomers with modular hydrogen bond2 network-mediated specificity
81d1f6ga_
not modelled 23.3 22
Fold:Voltage-gated potassium channels
Superfamily:Voltage-gated potassium channels
Family:Voltage-gated potassium channels
82c1wckA_
not modelled 23.2 37
PDB header:structural protein
Chain: A: PDB Molecule:bcla protein;
PDBTitle: crystal structure of the c-terminal domain of bcla, the major antigen2 of the exosporium of the bacillus anthracis spore.
83c3twiC_
not modelled 23.0 37
PDB header:immune system
Chain: C: PDB Molecule:bcla protein;
PDBTitle: variable lymphocyte receptor recognition of the immunodominant2 glycoprotein of bacillus anthracis spores
84c6f1tx_
not modelled 22.8 15
PDB header:motor protein
Chain: X: PDB Molecule:bicd family-like cargo adapter 1,bicd family-like cargo
PDBTitle: cryo-em structure of two dynein tail domains bound to dynactin and2 bicdr1
85c3ibpA_
not modelled 21.8 13
PDB header:cell cycle
Chain: A: PDB Molecule:chromosome partition protein mukb;
PDBTitle: the crystal structure of the dimerization domain of escherichia coli2 structural maintenance of chromosomes protein mukb
86c2wt7B_
not modelled 21.7 18
PDB header:transcription
Chain: B: PDB Molecule:transcription factor mafb;
PDBTitle: crystal structure of the bzip heterodimeric complex mafb:cfos bound to2 dna
87c2z2jA_
not modelled 21.5 22
PDB header:hydrolase
Chain: A: PDB Molecule:peptidyl-trna hydrolase;
PDBTitle: crystal structure of peptidyl-trna hydrolase from mycobacterium2 tuberculosis
88c5bu8A_
not modelled 21.2 21
PDB header:viral protein
Chain: A: PDB Molecule:dna stabilization protein;
PDBTitle: hk620 tail needle crystallized at ph 7.5 and derivatized with xenon
89d1h3fa2
not modelled 21.1 8
Fold:Alpha-L RNA-binding motif
Superfamily:Alpha-L RNA-binding motif
Family:Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
90c3ra3A_
not modelled 21.1 18
PDB header:de novo protein
Chain: A: PDB Molecule:p1c;
PDBTitle: crystal structure of a section of a de novo design gigadalton protein2 fibre
91d1p9ka_
not modelled 20.9 14
Fold:Alpha-L RNA-binding motif
Superfamily:Alpha-L RNA-binding motif
Family:YbcJ-like
92c5dfzD_
not modelled 20.8 9
PDB header:transferase
Chain: D: PDB Molecule:vacuolar protein sorting-associated protein 30;
PDBTitle: structure of vps34 complex ii from s. cerevisiae.
93c5cj1B_
not modelled 20.4 11
PDB header:motor protein
Chain: B: PDB Molecule:gp7-myh7-(1526-1571) chimera protein;
PDBTitle: crystal structure of the coiled coil of myh7 residues 1526 to 15712 fused to gp7
94d1k3ia1
not modelled 20.4 11
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:E-set domains of sugar-utilizing enzymes
95c4xa3A_
not modelled 20.1 5
PDB header:motor protein
Chain: A: PDB Molecule:gp7-myh7(1361-1425)-eb1 chimera protein;
PDBTitle: crystal structure of the coiled-coil surrounding skip 2 of myh7
96c6bl7A_
not modelled 19.7 11
PDB header:structural protein
Chain: A: PDB Molecule:protein stu2;
PDBTitle: s. cerevisiae stu2 coiled coil domain
97c5yz0C_
not modelled 19.5 10
PDB header:cell cycle
Chain: C: PDB Molecule:atr-interacting protein;
PDBTitle: cryo-em structure of human atr-atrip complex
98c4aniA_
not modelled 19.2 14
PDB header:chaperone
Chain: A: PDB Molecule:protein grpe;
PDBTitle: structural basis for the intermolecular communication between2 dnak and grpe in the dnak chaperone system from3 geobacillus kaustophilus hta426
99d1gph11
not modelled 18.9 45
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)

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