Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1830_(-)_2074848_2075525
DateFri Aug 2 13:30:44 BST 2019
Unique Job ID9c78a16bb0eefbed
SequenceVTQLVTRARS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:31.803 Y:49.225 Z:73.872
Model (left) based on template c3gp4B_
Top template information
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, merr family;
PDBTitle: crystal structure of putative merr family transcriptional regulator2 from listeria monocytogenes
Confidence and coverage
Confidence: 99.8% Coverage: 55%
123 residues ( 55% of your sequence) have been modelled with 99.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3gp4B_
99.8 15
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, merr family;
PDBTitle: crystal structure of putative merr family transcriptional regulator2 from listeria monocytogenes
2c3d6zA_
99.8 15
PDB header:transcription regulator/dna
Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator;
PDBTitle: crystal structure of r275e mutant of bmrr bound to dna and rhodamine
3c5af3A_
99.8 23
PDB header:dna binding
Chain: A: PDB Molecule:vapbc49;
PDBTitle: x-ray crystal structure of rv2018 from mycobacterium tuberculosis
4c5xqlA_
99.8 16
PDB header:transcription
Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator;
PDBTitle: crystal structure of a pseudomonas aeruginosa transcriptional2 regulator
5c3hh0C_
99.7 27
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulator, merr family;
PDBTitle: crystal structure of a transcriptional regulator, merr family from2 bacillus cereus
6d1r8da_
99.7 22
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
7c3gpvA_
99.7 15
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, merr family;
PDBTitle: crystal structure of a transcriptional regulator, merr2 family from bacillus thuringiensis
8c3qaoA_
99.7 18
PDB header:transcription regulator
Chain: A: PDB Molecule:merr-like transcriptional regulator;
PDBTitle: the crystal structure of the n-terminal domain of a merr-like2 transcriptional regulator from listeria monocytogenes egd-e
9c2vz4A_
99.7 34
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional activator tipa;
PDBTitle: the n-terminal domain of merr-like protein tipal bound to promoter dna
10c5gpeB_
99.7 15
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, merr-family;
PDBTitle: crystal structure of the transcription regulator pbrr691 from2 ralstonia metallidurans ch34 in complex with lead(ii)
11d1r8ea1
99.7 15
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
12c4r4eA_
99.7 24
PDB header:transcription regulator/dna
Chain: A: PDB Molecule:hth-type transcriptional regulator glnr;
PDBTitle: structure of glnr-dna complex
13c4r24B_
99.7 23
PDB header:transcrption/dna
Chain: B: PDB Molecule:hth-type transcriptional regulator tnra;
PDBTitle: complete dissection of b. subtilis nitrogen homeostatic circuitry
14d1q06a_
99.7 18
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
15c2zhhA_
99.7 17
PDB header:transcription
Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr;
PDBTitle: crystal structure of soxr
16c5c8eC_
99.6 20
PDB header:transcription regulator/dna
Chain: C: PDB Molecule:light-dependent transcriptional regulator carh;
PDBTitle: crystal structure of thermus thermophilus carh bound to2 adenosylcobalamin and a 26-bp dna segment
17c5i44E_
99.6 16
PDB header:dna binding protein/dna
Chain: E: PDB Molecule:chromosome-anchoring protein raca;
PDBTitle: structure of raca-dna complex; p21 form
18c5crlA_
99.6 15
PDB header:metal binding protein
Chain: A: PDB Molecule:mercuric resistance operon regulatory protein;
PDBTitle: crystal structure of the transcription activator tn501 merr in complex2 with mercury (ii)
19c2jmlA_
99.6 22
PDB header:transcription
Chain: A: PDB Molecule:dna binding domain/transcriptional regulator;
PDBTitle: solution structure of the n-terminal domain of cara repressor
20c2dg6A_
99.6 24
PDB header:gene regulation
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of the putative transcriptional regulator sco55502 from streptomyces coelicolor a3(2)
21c3ucsB_
not modelled 99.5 15
PDB header:chaperone
Chain: B: PDB Molecule:chaperone-modulator protein cbpm;
PDBTitle: crystal structure of the complex between cbpa j-domain and cbpm
22c4ua2B_
not modelled 99.4 14
PDB header:dna binding protein
Chain: B: PDB Molecule:regulatory protein;
PDBTitle: crystal structure of dual function transcriptional regulator merr from2 bacillus megaterium mb1
23c6amaO_
not modelled 98.9 13
PDB header:dna binding protein/dna
Chain: O: PDB Molecule:putative dna-binding protein;
PDBTitle: structure of s. coelicolor/s. venezuelae bldc-smea-ssfa complex to2 3.09 angstrom
24d1q08a_
not modelled 97.8 13
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
25c2ev2B_
not modelled 97.3 13
PDB header:lyase
Chain: B: PDB Molecule:hypothetical protein rv1264/mt1302;
PDBTitle: structure of rv1264n, the regulatory domain of the mycobacterial2 adenylyl cylcase rv1264, at ph 8.5
26c4j2nB_
not modelled 96.9 4
PDB header:viral protein
Chain: B: PDB Molecule:gp37;
PDBTitle: crystal structure of mycobacteriophage pukovnik xis
27c4j2nA_
not modelled 96.5 4
PDB header:viral protein
Chain: A: PDB Molecule:gp37;
PDBTitle: crystal structure of mycobacteriophage pukovnik xis
28c5ydcA_
not modelled 96.5 11
PDB header:transcription regulator
Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator rv1828;
PDBTitle: crystal structure of mercury soaked c-terminal domain of rv1828 from2 mycobacterium tuberculosis
29c3ezfA_
not modelled 94.6 11
PDB header:biosynthetic protein
Chain: A: PDB Molecule:para;
PDBTitle: partition protein
30c1z4hA_
not modelled 93.5 7
PDB header:protein binding, dna binding protein
Chain: A: PDB Molecule:tor inhibition protein;
PDBTitle: the response regulator tori belongs to a new family of2 atypical excisionase
31c1u78A_
not modelled 91.3 6
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:transposable element tc3 transposase;
PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
32c2kfsA_
not modelled 84.4 22
PDB header:dna-binding protein
Chain: A: PDB Molecule:conserved hypothetical regulatory protein;
PDBTitle: nmr structure of rv2175c
33c5jaaB_
not modelled 79.1 13
PDB header:toxin
Chain: B: PDB Molecule:antitoxin iga-2;
PDBTitle: crystal structure of the higba2 toxin-antitoxin complex
34c5j9iH_
not modelled 78.0 13
PDB header:antitoxin
Chain: H: PDB Molecule:antitoxin iga-2;
PDBTitle: crystal structure of the higa2 antitoxin c-terminal domain
35d2jn6a1
not modelled 76.8 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Cgl2762-like
36c2ppxA_
not modelled 76.7 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein atu1735;
PDBTitle: crystal structure of a hth xre-family like protein from agrobacterium2 tumefaciens
37d2ppxa1
not modelled 76.7 13
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
38c3e7lD_
not modelled 73.2 14
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
39c2m8gX_
not modelled 73.0 33
PDB header:transcription
Chain: X: PDB Molecule:transcriptional regulator;
PDBTitle: structure, function, and tethering of dna-binding domains in 542 transcriptional activators
40d1pdnc_
not modelled 73.0 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Paired domain
41c2wusR_
not modelled 72.5 12
PDB header:structural protein
Chain: R: PDB Molecule:putative uncharacterized protein;
PDBTitle: bacterial actin mreb assembles in complex with cell shape protein rodz
42c1umqA_
not modelled 72.0 8
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
43d1umqa_
not modelled 72.0 8
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
44c3fmyA_
not modelled 70.8 12
PDB header:dna binding protein
Chain: A: PDB Molecule:hth-type transcriptional regulator mqsa
PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021)
45c6paxA_
not modelled 70.4 16
PDB header:gene regulation/dna
Chain: A: PDB Molecule:homeobox protein pax-6;
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
46c2x48B_
not modelled 68.1 18
PDB header:viral protein
Chain: B: PDB Molecule:cag38821;
PDBTitle: orf 55 from sulfolobus islandicus rudivirus 1
47c3b7hA_
not modelled 68.1 10
PDB header:structural protein
Chain: A: PDB Molecule:prophage lp1 protein 11;
PDBTitle: crystal structure of the prophage lp1 protein 11
48d1r69a_
not modelled 67.9 15
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
49c2kpjA_
not modelled 67.0 9
PDB header:transcription regulator
Chain: A: PDB Molecule:sos-response transcriptional repressor, lexa;
PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a
50d2ofya1
not modelled 67.0 17
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
51d1adra_
not modelled 66.5 17
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
52d1ntca_
not modelled 66.0 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
53d1etxa_
not modelled 66.0 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
54c2ebyA_
not modelled 65.3 0
PDB header:transcription
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq;
PDBTitle: crystal structure of a hypothetical protein from e. coli
55c3op9A_
not modelled 65.1 13
PDB header:transcription regulator
Chain: A: PDB Molecule:pli0006 protein;
PDBTitle: crystal structure of transcriptional regulator from listeria innocua
56c2xcjB_
not modelled 64.9 17
PDB header:viral protein
Chain: B: PDB Molecule:c protein;
PDBTitle: crystal structure of p2 c, the immunity repressor of2 temperate e. coli phage p2
57c3clcC_
not modelled 64.8 9
PDB header:transcription regulator/dna
Chain: C: PDB Molecule:regulatory protein;
PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator
58d1fipa_
not modelled 63.9 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
59c3vk0B_
not modelled 63.8 13
PDB header:dna binding protein
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of hypothetical transcription factor nhtf from2 neisseria
60c3cuoB_
not modelled 63.7 22
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav;
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
61c5woqA_
not modelled 63.5 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator clgr;
PDBTitle: crystal structure of an xre family protein transcriptional regulator2 from mycobacterium smegmatis
62c6j05B_
not modelled 63.5 17
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
63d1sq8a_
not modelled 62.4 13
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
64c2bnoA_
not modelled 61.8 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:epoxidase;
PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase from s.2 wedmorenis.
65c3dnvB_
not modelled 61.3 13
PDB header:transcription/dna
Chain: B: PDB Molecule:hth-type transcriptional regulator hipb;
PDBTitle: mdt protein
66c4ghjA_
not modelled 61.3 17
PDB header:transcription
Chain: A: PDB Molecule:probable transcriptional regulator;
PDBTitle: 1.75 angstrom crystal structure of transcriptional regulator ftom2 vibrio vulnificus.
67d1x57a1
not modelled 61.0 4
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:EDF1-like
68c2auwB_
not modelled 60.6 21
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein ne0471;
PDBTitle: crystal structure of putative dna binding protein ne0471 from2 nitrosomonas europaea atcc 19718
69c4l5eA_
not modelled 60.6 22
PDB header:protein binding
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of a. aeolicus ntrc1 dna binding domain
70d1b0na2
not modelled 60.4 27
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
71c2fjrB_
not modelled 60.2 13
PDB header:transcription regulator
Chain: B: PDB Molecule:repressor protein ci;
PDBTitle: crystal structure of bacteriophage 186
72c5dukA_
not modelled 58.4 17
PDB header:transcription
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: n-terminal structure of putative dna binding transcription factor from2 thermoplasmatales archaeon scgc ab-539-n05
73d2r1jl1
not modelled 58.2 17
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
74c3bs3A_
not modelled 58.1 9
PDB header:dna binding protein
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis
75c3f52A_
not modelled 57.8 13
PDB header:transcription activator
Chain: A: PDB Molecule:clp gene regulator (clgr);
PDBTitle: crystal structure of the clp gene regulator clgr from c. glutamicum
76c2mezA_
not modelled 57.2 10
PDB header:rna binding protein
Chain: A: PDB Molecule:multiprotein bridging factor (mbp-like);
PDBTitle: flexible anchoring of archaeal mbf1 on ribosomes suggests role as2 recruitment factor
77c4ybaA_
not modelled 56.9 17
PDB header:gene regulation
Chain: A: PDB Molecule:regulatory protein c;
PDBTitle: the structure of the c.kpn2i controller protein
78c3omtA_
not modelled 56.2 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: putative antitoxin component, chu_2935 protein, from xre family from2 prevotella buccae.
79d1y7ya1
not modelled 55.8 13
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
80c3t76A_
not modelled 55.6 4
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator vanug;
PDBTitle: crystal structure of transcriptional regulator vanug, form ii
81c3mlfC_
not modelled 55.3 9
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulator;
PDBTitle: putative transcriptional regulator from staphylococcus aureus.
82d1utxa_
not modelled 53.7 0
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
83d1r1ua_
not modelled 53.4 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
84d2b5aa1
not modelled 52.8 17
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
85c5tmxA_
not modelled 52.5 20
PDB header:transcription regulator
Chain: A: PDB Molecule:protein sini;
PDBTitle: solution structure of sini, antagonist to the master biofilm-regulator2 sinr in bacillus subtilis
86c2ef8A_
not modelled 52.0 4
PDB header:transcription regulator
Chain: A: PDB Molecule:putative transcription factor;
PDBTitle: crystal structure of c.ecot38is
87c2jvlA_
not modelled 51.9 13
PDB header:transcription
Chain: A: PDB Molecule:trmbf1;
PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei
88c1y9qA_
not modelled 51.5 22
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, hth_3 family;
PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae
89c4pu4C_
not modelled 51.2 17
PDB header:toxin/antitoxin/dna
Chain: C: PDB Molecule:toxin-antitoxin system antidote transcriptional repressor
PDBTitle: shewanella oneidensis mr-1 toxin antitoxin system hipa, hipb and its2 operator dna complex (space group p21)
90d1llib_
not modelled 50.6 13
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
91d1yioa1
not modelled 50.6 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:C-terminal effector domain of the bipartite response regulators
Family:GerE-like (LuxR/UhpA family of transcriptional regulators)
92c2rn7A_
not modelled 50.3 25
PDB header:unknown function
Chain: A: PDB Molecule:is629 orfa;
PDBTitle: nmr solution structure of tnpe protein from shigella2 flexneri. northeast structural genomics target sfr125
93c3trbA_
not modelled 50.3 4
PDB header:dna binding protein
Chain: A: PDB Molecule:virulence-associated protein i;
PDBTitle: structure of an addiction module antidote protein of a higa (higa)2 family from coxiella burnetii
94c3bd1B_
not modelled 49.4 12
PDB header:transcription
Chain: B: PDB Molecule:cro protein;
PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1
95c1x3uA_
not modelled 49.1 17
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein fixj;
PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
96d1jt6a1
not modelled 49.0 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Tetracyclin repressor-like, N-terminal domain
97c3kxaD_
not modelled 49.0 29
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of ngo0477 from neisseria gonorrhoeae
98c1zljE_
not modelled 48.6 4
PDB header:transcription
Chain: E: PDB Molecule:dormancy survival regulator;
PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic2 response regulator dosr c-terminal domain
99d1j9ia_
not modelled 48.6 21
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Terminase gpNU1 subunit domain
100c3gn5B_
not modelled 48.2 12
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
101c1hlvA_
not modelled 47.6 11
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:major centromere autoantigen b;
PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna
102c6j0eB_
not modelled 46.7 9
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
103c2o8xA_
not modelled 46.2 12
PDB header:transcription
Chain: A: PDB Molecule:probable rna polymerase sigma-c factor;
PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc
104d1gt0c1
not modelled 45.9 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
105c1r22B_
not modelled 45.3 17
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
106d2auwa1
not modelled 44.9 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:NE0471 C-terminal domain-like
107c3mklB_
not modelled 44.8 7
PDB header:transcription regulator
Chain: B: PDB Molecule:hth-type transcriptional regulator gadx;
PDBTitle: crystal structure of dna-binding transcriptional dual regulator from2 escherichia coli k-12
108c2k40A_
not modelled 44.5 14
PDB header:dna binding protein
Chain: A: PDB Molecule:homeobox expressed in es cells 1;
PDBTitle: nmr structure of hesx-1 homeodomain double mutant r31l/e42l
109d2fbqa1
not modelled 44.4 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Tetracyclin repressor-like, N-terminal domain
110d1rp3a2
not modelled 44.4 8
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma4 domain
111d1etob_
not modelled 44.4 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
112d2croa_
not modelled 44.1 9
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
113c1b0nA_
not modelled 43.7 27
PDB header:transcription regulator
Chain: A: PDB Molecule:protein (sinr protein);
PDBTitle: sinr protein/sini protein complex
114d1pm6a_
not modelled 43.6 15
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Excisionase-like
115d2a6ca1
not modelled 43.6 20
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:NE1354
116d1y9qa1
not modelled 43.5 22
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Probable transcriptional regulator VC1968, N-terminal domain
117d1ocpa_
not modelled 43.5 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
118c3fymA_
not modelled 43.5 12
PDB header:dna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus
119c4gqmA_
not modelled 43.2 9
PDB header:unknown function
Chain: A: PDB Molecule:ct009;
PDBTitle: crystal structure of a helix-turn-helix containing hypothetical2 protein (ct009) from chlamydia trachomatis in a sub-domain swap3 conformation
120d1bw5a_
not modelled 42.9 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain

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