Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1836c_(-)_2082610_2084643
DateFri Aug 2 13:30:44 BST 2019
Unique Job IDc64e94ce4f377506
SequenceMGRHSKPDPE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:39.539 Y:45.290 Z:47.924
Model (left) based on template c4fx5A_
Top template information
PDB header:blood clotting
Chain: A: PDB Molecule:von willebrand factor type a;
PDBTitle: von willebrand factor type a from catenulispora acidiphila
Confidence and coverage
Confidence:100.0% Coverage: 27%
183 residues ( 27% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
464 residues ( 69%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 52% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4fx5A_
100.0 12
PDB header:blood clotting
Chain: A: PDB Molecule:von willebrand factor type a;
PDBTitle: von willebrand factor type a from catenulispora acidiphila
2c6fpzA_
99.9 13
PDB header:structural protein
Chain: A: PDB Molecule:inter-alpha-trypsin inhibitor heavy chain h1;
PDBTitle: inter-alpha-inhibitor heavy chain 1, d298a
3c5a8jA_
99.9 13
PDB header:transcription
Chain: A: PDB Molecule:vwa2;
PDBTitle: crystal structure of the arnb paralog vwa2 from2 sulfolobus acidocaldarius
4c6nmiE_
99.9 17
PDB header:transcription
Chain: E: PDB Molecule:general transcription factor iih subunit 2, p44;
PDBTitle: cryo-em structure of the human tfiih core complex
5c6o9l6_
99.8 17
PDB header:transcription/dna
Chain: 6: PDB Molecule:general transcription factor iih subunit 2;
PDBTitle: human holo-pic in the closed state
6c3ibsA_
99.8 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein batb;
PDBTitle: crystal structure of conserved hypothetical protein batb from2 bacteroides thetaiotaomicron
7c5iy70_
99.8 17
PDB header:transcription, transferase/dna
Chain: 0: PDB Molecule:general transcription factor iih subunit 2;
PDBTitle: human holo-pic in the open state
8c1rs0A_
99.8 12
PDB header:hydrolase
Chain: A: PDB Molecule:complement factor b;
PDBTitle: crystal structure analysis of the bb segment of factor b2 complexed with di-isopropyl-phosphate (dip)
9c4rckB_
99.8 16
PDB header:membrane protein
Chain: B: PDB Molecule:hypothetical membrane spanning protein;
PDBTitle: crystal structure of uncharacterized membrane spanning protein from2 vibrio fischeri
10c3jbrF_
99.8 13
PDB header:membrane protein
Chain: F: PDB Molecule:voltage-dependent calcium channel subunit alpha-2/delta-1;
PDBTitle: cryo-em structure of the rabbit voltage-gated calcium channel cav1.12 complex at 4.2 angstrom
11c4b4tW_
99.8 17
PDB header:hydrolase
Chain: W: PDB Molecule:26s proteasome regulatory subunit rpn10;
PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome
12c4wfqA_
99.8 15
PDB header:transcription
Chain: A: PDB Molecule:suppressor of stem-loop protein 1;
PDBTitle: crystal structure of tfiih subunit
13c2x5nA_
99.8 15
PDB header:nuclear protein
Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn10;
PDBTitle: crystal structure of the sprpn10 vwa domain
14c5gjvF_
99.8 13
PDB header:membrane protein
Chain: F: PDB Molecule:voltage-dependent calcium channel subunit alpha-2/delta-1;
PDBTitle: structure of the mammalian voltage-gated calcium channel cav1.12 complex at near atomic resolution
15c2x31F_
99.8 17
PDB header:ligase
Chain: F: PDB Molecule:magnesium-chelatase 60 kda subunit;
PDBTitle: modelling of the complex between subunits bchi and bchd of magnesium2 chelatase based on single-particle cryo-em reconstruction at 7.5 ang
16c5oqj6_
99.7 15
PDB header:transcription
Chain: 6: PDB Molecule:suppressor of stem-loop protein 1;
PDBTitle: structure of yeast transcription pre-initiation complex with tfiih
17c2ok5A_
99.7 13
PDB header:hydrolase
Chain: A: PDB Molecule:complement factor b;
PDBTitle: human complement factor b
18d2ok5a1
99.7 12
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
19d1sbpa_
99.7 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
20c6ddnB_
99.7 23
PDB header:transport protein
Chain: B: PDB Molecule:probable sulfate-binding lipoprotein subi;
PDBTitle: the sulfate-binding protein subi from mycobacterium tuberculosis h37rv
21c4hqnB_
not modelled 99.7 11
PDB header:cell adhesion
Chain: B: PDB Molecule:sporozoite surface protein 2;
PDBTitle: crystal structure of manganese-loaded plasmodium vivax trap protein
22c5gjqW_
not modelled 99.6 20
PDB header:hydrolase
Chain: W: PDB Molecule:26s proteasome non-atpase regulatory subunit 4;
PDBTitle: structure of the human 26s proteasome bound to usp14-ubal
23c2i6sA_
not modelled 99.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:complement c2a fragment;
PDBTitle: complement component c2a
24d1q0pa_
not modelled 99.6 17
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
25c4rxlA_
not modelled 99.6 21
PDB header:transport protein
Chain: A: PDB Molecule:molybdenum abc transporter, periplasmic molybdenum-binding
PDBTitle: crystal structure of molybdenum abc transporter solute binding protein2 vc_a0726 from vibrio cholerae, target efi-510913, in complex with3 tungstate
26d1pd0a3
not modelled 99.6 12
Fold:vWA-like
Superfamily:vWA-like
Family:Trunk domain of Sec23/24
27d1amfa_
not modelled 99.6 19
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
28d1jeyb2
not modelled 99.6 10
Fold:vWA-like
Superfamily:vWA-like
Family:Ku80 subunit N-terminal domain
29c4hqfA_
not modelled 99.5 10
PDB header:cell adhesion
Chain: A: PDB Molecule:thrombospondin-related anonymous protein, trap;
PDBTitle: crystal structure of plasmodium falciparum trap, i4 form
30c2iueA_
not modelled 99.5 14
PDB header:membrane protein
Chain: A: PDB Molecule:pactolus i-domain;
PDBTitle: pactolus i-domain: functional switching of the rossmann2 fold
31c5um2A_
not modelled 99.5 14
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter sulfate binding protein;
PDBTitle: functional and structural characterization of a sulfate-binding2 protein (sbp) from xanthomonas citri
32d1jeya2
not modelled 99.5 6
Fold:vWA-like
Superfamily:vWA-like
Family:Ku70 subunit N-terminal domain
33c3n2nC_
not modelled 99.5 11
PDB header:toxin receptor
Chain: C: PDB Molecule:anthrax toxin receptor 1;
PDBTitle: the crystal structure of tumor endothelial marker 8 (tem8)2 extracellular domain
34d1shux_
not modelled 99.5 13
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
35d1ijba_
not modelled 99.5 11
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
36d1atza_
not modelled 99.5 17
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
37c2b2xB_
not modelled 99.5 15
PDB header:immune system
Chain: B: PDB Molecule:integrin alpha-1;
PDBTitle: vla1 rdeltah i-domain complexed with a quadruple mutant of the aqc22 fab
38d1u0oc1
not modelled 99.5 11
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
39c2h5yC_
not modelled 99.5 19
PDB header:metal transport
Chain: C: PDB Molecule:molybdate-binding periplasmic protein;
PDBTitle: crystallographic structure of the molybdate-binding protein of2 xanthomonas citri at 1.7 ang resolution bound to molybdate
40c4cnbA_
not modelled 99.5 11
PDB header:structural protein
Chain: A: PDB Molecule:proximal thread matrix protein 1;
PDBTitle: structure of proximal thread matrix protein 1 (ptmp1) from the2 mussel byssus - crystal form 2
41d1atga_
not modelled 99.4 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
42d1n3ya_
not modelled 99.4 13
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
43c4okuA_
not modelled 99.4 13
PDB header:cell adhesion
Chain: A: PDB Molecule:micronemal protein mic2;
PDBTitle: structure of toxoplasma gondii promic2
44c3txaA_
not modelled 99.4 16
PDB header:cell adhesion
Chain: A: PDB Molecule:cell wall surface anchor family protein;
PDBTitle: structural analysis of adhesive tip pilin, gbs104 from group b2 streptococcus agalactiae
45c4kd5A_
not modelled 99.4 14
PDB header:transport protein
Chain: A: PDB Molecule:abc-type transport system, molybdenum-specific
PDBTitle: substrate binding domain of putative molybdenum abc transporter from2 clostridium difficile
46c5e6rA_
not modelled 99.4 19
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-l;
PDBTitle: structures of leukocyte integrin alb2: the ai domain, the headpiece,2 and the pocket for the internal ligand
47c3gxbB_
not modelled 99.4 13
PDB header:cell adhesion
Chain: B: PDB Molecule:von willebrand factor;
PDBTitle: crystal structure of vwf a2 domain
48d1yvra2
not modelled 99.3 11
Fold:vWA-like
Superfamily:vWA-like
Family:RoRNP C-terminal domain-like
49c5my5A_
not modelled 99.3 9
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter periplasmic substrate-binding protein;
PDBTitle: tungstate binding protein - tupa - from desulfovibrio alaskensis g20
50d1ck4a_
not modelled 99.3 17
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
51d1mf7a_
not modelled 99.3 11
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
52c2xggB_
not modelled 99.3 12
PDB header:hydrolase
Chain: B: PDB Molecule:microneme protein 2;
PDBTitle: structure of toxoplasma gondii micronemal protein 2 a_i2 domain
53c2nvoA_
not modelled 99.3 15
PDB header:rna binding protein
Chain: A: PDB Molecule:ro sixty-related protein, rsr;
PDBTitle: crystal structure of deinococcus radiodurans ro (rsr) protein
54d1v7pc_
not modelled 99.3 16
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
55c4ihkA_
not modelled 99.2 14
PDB header:cell adhesion
Chain: A: PDB Molecule:collagen alpha3(vi);
PDBTitle: crystal structure of the collagen vi alpha3 n5 domain r1061q
56c3tw0D_
not modelled 99.2 13
PDB header:cell adhesion
Chain: D: PDB Molecule:cell wall surface anchor family protein;
PDBTitle: structural analysis of adhesive tip pilin, gbs104 from group b2 streptococcus agalactiae
57d1pt6a_
not modelled 99.2 15
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
58c1jeyB_
not modelled 99.1 10
PDB header:dna binding protein/dna
Chain: B: PDB Molecule:ku80;
PDBTitle: crystal structure of the ku heterodimer bound to dna
59d1mjna_
not modelled 99.1 20
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
60c3fj7A_
not modelled 98.9 13
PDB header:protein binding
Chain: A: PDB Molecule:major antigenic peptide peb3;
PDBTitle: crystal structure of l-phospholactate bound peb3
61c3muqB_
not modelled 98.9 11
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized conserved protein;
PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633
62d1tyeb2
not modelled 98.8 11
Fold:vWA-like
Superfamily:vWA-like
Family:Integrin A (or I) domain
63c3cfxA_
not modelled 98.8 14
PDB header:transport protein
Chain: A: PDB Molecule:upf0100 protein ma_0280;
PDBTitle: crystal structure of m. acetivorans periplasmic binding protein2 moda/wtpa with bound tungstate
64c4jb7A_
not modelled 98.7 13
PDB header:cell invasion
Chain: A: PDB Molecule:accessory colonization factor acfc;
PDBTitle: 1.42 angstrom resolution crystal structure of accessory colonization2 factor acfc (acfc) in complex with d-aspartic acid
65c6nmiF_
not modelled 98.7 14
PDB header:transcription
Chain: F: PDB Molecule:general transcription factor iih subunit 3, p34;
PDBTitle: cryo-em structure of the human tfiih core complex
66c4jwoA_
not modelled 98.7 10
PDB header:phosphate binding protein
Chain: A: PDB Molecule:phosphate binding protein;
PDBTitle: the crystal structure of a possible phosphate binding protein from2 planctomyces limnophilus dsm 3776
67d2onsa1
not modelled 98.6 15
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
68c3cvgD_
not modelled 98.6 15
PDB header:metal binding protein
Chain: D: PDB Molecule:putative metal binding protein;
PDBTitle: crystal structure of a periplasmic putative metal binding protein
69c3c9hB_
not modelled 98.6 11
PDB header:transport protein
Chain: B: PDB Molecule:abc transporter, substrate binding protein;
PDBTitle: crystal structure of the substrate binding protein of the abc2 transporter from agrobacterium tumefaciens
70c6bxjA_
not modelled 98.5 15
PDB header:cell adhesion
Chain: A: PDB Molecule:chimera protein of integrin beta-3 and integrin alpha-l;
PDBTitle: structure of a single-chain beta3 integrin
71c4n13A_
not modelled 98.5 10
PDB header:transport protein
Chain: A: PDB Molecule:phosphate abc transporter, periplasmic phosphate-binding
PDBTitle: crystal structure of psts (bb_0215) from borrelia burgdorferi
72c4ombB_
not modelled 98.5 9
PDB header:transport protein
Chain: B: PDB Molecule:phosphate binding protein;
PDBTitle: phosphate binding protein
73c3cg3A_
not modelled 98.5 13
PDB header:transport protein
Chain: A: PDB Molecule:upf0100 protein ph0151;
PDBTitle: crystal structure of p. horikoshii periplasmic binding2 protein moda/wtpa with bound tungstate
74c4gd5B_
not modelled 98.5 11
PDB header:transport protein
Chain: B: PDB Molecule:phosphate abc transporter, phosphate-binding protein;
PDBTitle: x-ray crystal structure of a putative phosphate abc transporter2 substrate-binding protein with bound phosphate from clostridium3 perfringens
75c5t1pB_
not modelled 98.5 12
PDB header:hydrolase
Chain: B: PDB Molecule:abc transporter, periplasmic substrate-binding protein;
PDBTitle: crystal structure of the putative periplasmic solute-binding protein2 from campylobacter jejuni
76c3kn3C_
not modelled 98.5 10
PDB header:transcription
Chain: C: PDB Molecule:putative periplasmic protein;
PDBTitle: crystal structure of lysr substrate binding domain (25-263) of2 putative periplasmic protein from wolinella succinogenes
77c3lr1A_
not modelled 98.5 9
PDB header:transport protein
Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate-
PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens
78c6bxfA_
not modelled 98.5 15
PDB header:cell adhesion
Chain: A: PDB Molecule:chimera protein of integrin beta-3 and integrin alpha-l;
PDBTitle: crystal structure of an extended b3 integrin l33
79d2qtva3
not modelled 98.5 13
Fold:vWA-like
Superfamily:vWA-like
Family:Trunk domain of Sec23/24
80c3cg1A_
not modelled 98.4 14
PDB header:transport protein
Chain: A: PDB Molecule:upf0100 protein pf0080;
PDBTitle: crystal structure of p. furiosus periplasmic binding protein2 moda/wtpa with bound tungstate
81c1pd0A_
not modelled 98.4 12
PDB header:transport protein
Chain: A: PDB Molecule:protein transport protein sec24;
PDBTitle: crystal structure of the copii coat subunit, sec24,2 complexed with a peptide from the snare protein sed53 (yeast syntaxin-5)
82c6djpB_
not modelled 98.4 14
PDB header:membrane protein
Chain: B: PDB Molecule:integrin beta-8;
PDBTitle: integrin alpha-v beta-8 in complex with the fabs 8b8 and 68
83c2qryD_
not modelled 98.4 10
PDB header:transport protein
Chain: D: PDB Molecule:thiamine-binding periplasmic protein;
PDBTitle: periplasmic thiamin binding protein
84c3k6wA_
not modelled 98.3 13
PDB header:transport protein
Chain: A: PDB Molecule:solute-binding protein ma_0280;
PDBTitle: apo and ligand bound structures of moda from the archaeon2 methanosarcina acetivorans
85c4um9D_
not modelled 98.3 13
PDB header:immune system
Chain: D: PDB Molecule:integrin beta-6;
PDBTitle: crystal structure of alpha v beta 6 with peptide
86c3ragA_
not modelled 98.3 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein aaci_0196 from2 alicyclobacillus acidocaldarius subsp. acidocaldarius dsm 446
87c3eg9B_
not modelled 98.3 18
PDB header:protein transport
Chain: B: PDB Molecule:sec24 related gene family, member d;
PDBTitle: crystal structure of the mammalian copii-coat protein sec23/24 bound2 to the transport signal sequence of membrin
88c3eh2B_
not modelled 98.3 19
PDB header:protein transport
Chain: B: PDB Molecule:protein transport protein sec24c;
PDBTitle: crystal structure of the human copii-coat protein sec24c
89c4r73B_
not modelled 98.2 13
PDB header:transport protein
Chain: B: PDB Molecule:abc-type fe3+ transport system, periplasmic component;
PDBTitle: structure of the periplasmic binding protein afua from actinobacillus2 pleuropneumoniae (endogenous glucose-6-phosphate and mannose-6-3 phosphate bound)
90c3eg9A_
not modelled 98.2 15
PDB header:protein transport
Chain: A: PDB Molecule:protein transport protein sec23a;
PDBTitle: crystal structure of the mammalian copii-coat protein sec23/24 bound2 to the transport signal sequence of membrin
91c1twyG_
not modelled 98.2 12
PDB header:structural genomics, unknown function
Chain: G: PDB Molecule:abc transporter, periplasmic substrate-binding protein;
PDBTitle: crystal structure of an abc-type phosphate transport receptor from2 vibrio cholerae
92c4ecfA_
not modelled 98.2 14
PDB header:phosphate-binding protein
Chain: A: PDB Molecule:abc-type phosphate transport system, periplasmic component;
PDBTitle: crystal structure of an abc-type phosphate transport system,2 periplasmic component (lvis_0633) from lactobacillus brevis atcc 3673 at 1.55 a resolution
93d1twya_
not modelled 98.2 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
94c1jeqA_
not modelled 98.2 7
PDB header:dna binding protein
Chain: A: PDB Molecule:ku70;
PDBTitle: crystal structure of the ku heterodimer
95c4exlD_
not modelled 98.2 10
PDB header:transport protein
Chain: D: PDB Molecule:phosphate-binding protein psts 1;
PDBTitle: crystal structure of phosphate abc transporter, periplasmic phosphate-2 binding protein psts 1 (pbp1) from streptococcus pneumoniae canada3 mdr_19a
96c6fjlD_
not modelled 98.1 17
PDB header:metal binding protein
Chain: D: PDB Molecule:abc-type fe3+ transport system, periplasmic component;
PDBTitle: structure of ibps from dickeya dadantii
97c3vi3D_
not modelled 98.1 12
PDB header:cell adhesion/immune system
Chain: D: PDB Molecule:integrin beta-1;
PDBTitle: crystal structure of alpha5beta1 integrin headpiece (ligand-free form)
98c1u8cB_
not modelled 98.1 12
PDB header:cell adhesion
Chain: B: PDB Molecule:integrin beta-3;
PDBTitle: a novel adaptation of the integrin psi domain revealed from its2 crystal structure
99c1m2vB_
not modelled 98.0 13
PDB header:protein transport
Chain: B: PDB Molecule:protein transport protein sec24;
PDBTitle: crystal structure of the yeast sec23/24 heterodimer
100c3v4pB_
not modelled 97.9 12
PDB header:cell adhesion
Chain: B: PDB Molecule:integrin beta-7;
PDBTitle: crystal structure of a4b7 headpiece complexed with fab act-1
101c1m2oA_
not modelled 97.8 14
PDB header:protein transport/signaling protein
Chain: A: PDB Molecule:protein transport protein sec23;
PDBTitle: crystal structure of the sec23-sar1 complex
102c3k71G_
not modelled 97.8 15
PDB header:cell adhesion
Chain: G: PDB Molecule:integrin alpha-x;
PDBTitle: structure of integrin alphax beta2 ectodomain
103c4eloD_
not modelled 97.8 11
PDB header:metal transport
Chain: D: PDB Molecule:iron abc transporter, periplasmic iron-binding protein;
PDBTitle: ferric binding protein in apo form 1
104c3ijeB_
not modelled 97.7 12
PDB header:protein binding
Chain: B: PDB Molecule:integrin beta-3;
PDBTitle: crystal structure of the complete integrin alhavbeta3 ectodomain plus2 an alpha/beta transmembrane fragment
105c3egxB_
not modelled 97.7 17
PDB header:protein transport
Chain: B: PDB Molecule:protein transport protein sec24a;
PDBTitle: crystal structure of the mammalian copii-coat protein sec23a/24a2 complexed with the snare protein sec22b and bound to the transport3 signal sequence of the snare protein bet1
106c3fcuB_
not modelled 97.6 13
PDB header:cell adhesion/blood clotting
Chain: B: PDB Molecule:integrin beta-3;
PDBTitle: structure of headpiece of integrin aiibb3 in open conformation
107c5y58E_
not modelled 97.5 14
PDB header:rna binding protein
Chain: E: PDB Molecule:atp-dependent dna helicase ii subunit 1;
PDBTitle: crystal structure of ku70/80 and tlc1
108d1xvxa_
not modelled 97.4 15
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
109d1xc1a_
not modelled 97.3 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
110c1yvrA_
not modelled 97.3 14
PDB header:rna binding protein
Chain: A: PDB Molecule:60-kda ss-a/ro ribonucleoprotein;
PDBTitle: ro autoantigen
111c4r6yA_
not modelled 97.3 12
PDB header:transport protein
Chain: A: PDB Molecule:putative 2-aminoethylphosphonate-binding periplasmic
PDBTitle: crystal structure of solute-binding protein stm0429 from salmonella2 enterica subsp. enterica serovar typhimurium str. lt2, target efi-3 510776, a closed conformation, in complex with glycerol and acetate
112c3k6sB_
not modelled 97.2 14
PDB header:cell adhesion
Chain: B: PDB Molecule:integrin beta-2;
PDBTitle: structure of integrin alphaxbeta2 ectodomain
113d1y9ua_
not modelled 97.2 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
114d1xvya_
not modelled 97.1 16
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
115c5y58D_
not modelled 97.1 10
PDB header:rna binding protein
Chain: D: PDB Molecule:atp-dependent dna helicase ii subunit 2;
PDBTitle: crystal structure of ku70/80 and tlc1
116c6nlpA_
not modelled 97.1 13
PDB header:transport protein
Chain: A: PDB Molecule:bacterial extracellular solute-binding family protein;
PDBTitle: the crystal structure of an abc transporter periplasmic binding2 protein ydcs from escherichia coli bw25113
117d1y4ta_
not modelled 97.1 12
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
118c2pt1A_
not modelled 97.0 9
PDB header:metal transport
Chain: A: PDB Molecule:iron transport protein;
PDBTitle: futa1 synechocystis pcc 6803
119c3cfzA_
not modelled 96.9 17
PDB header:transport protein
Chain: A: PDB Molecule:upf0100 protein mj1186;
PDBTitle: crystal structure of m. jannaschii periplasmic binding2 protein moda/wtpa with bound tungstate
120c4i1dB_
not modelled 96.6 11
PDB header:transport protein
Chain: B: PDB Molecule:abc transporter substrate-binding protein;
PDBTitle: the crystal structure of an abc transporter substrate-binding protein2 from bradyrhizobium japonicum usda 110

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below