1 c4il3B_
99.7
19
PDB header: hydrolaseChain: B: PDB Molecule: ste24p;
PDBTitle: crystal structure of s. mikatae ste24p
2 c4aw6B_
99.7
18
PDB header: hydrolaseChain: B: PDB Molecule: caax prenyl protease 1 homolog;
PDBTitle: crystal structure of the human nuclear membrane zinc metalloprotease2 zmpste24 (face1)
3 c3c37B_
99.4
26
PDB header: hydrolaseChain: B: PDB Molecule: peptidase, m48 family;
PDBTitle: x-ray structure of the putative zn-dependent peptidase q74d82 at the2 resolution 1.7 a. northeast structural genomics consortium target3 gsr143a
4 c3cqbB_
99.3
22
PDB header: hydrolaseChain: B: PDB Molecule: probable protease htpx homolog;
PDBTitle: crystal structure of heat shock protein htpx domain from vibrio2 parahaemolyticus rimd 2210633
5 c4jixB_
98.8
10
PDB header: hydrolaseChain: B: PDB Molecule: projannalysin;
PDBTitle: crystal structure of the metallopeptidase zymogen of2 methanocaldococcus jannaschii jannalysin
6 c6aitD_
98.5
20
PDB header: hydrolaseChain: D: PDB Molecule: beta-barrel assembly-enhancing protease;
PDBTitle: crystal structure of e. coli bepa
7 c4jiuA_
95.5
29
PDB header: hydrolaseChain: A: PDB Molecule: proabylysin;
PDBTitle: crystal structure of the metallopeptidase zymogen of pyrococcus abyssi2 abylysin
8 c5xbvA_
94.0
16
PDB header: hydrolaseChain: A: PDB Molecule: wss1p;
PDBTitle: crystal structure of wss1 mutant from saccharomyces cerevisiae
9 c6mdxA_
93.0
16
PDB header: dna binding protein/dnaChain: A: PDB Molecule: sprt-like domain-containing protein spartan;
PDBTitle: mechanism of protease dependent dpc repair
10 c3dtkA_
84.6
15
PDB header: gene regulationChain: A: PDB Molecule: irre protein;
PDBTitle: crystal structure of the irre protein, a central regulator2 of dna damage repair in deinococcaceae
11 c5ln5A_
84.1
18
PDB header: hydrolaseChain: A: PDB Molecule: ubiquitin and wlm domain-containing metalloprotease
PDBTitle: crystal structure of the wss1 e203q mutant from s. pombe
12 c6cz6D_
77.8
13
PDB header: transcriptionChain: D: PDB Molecule: hth-type transcriptional regulator prpr;
PDBTitle: mycobacterium tuberculosis transcriptional regulator
13 d2ejqa1
74.9
47
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: TTHA0227-like
14 d3e11a1
61.8
35
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: TTHA0227-like
15 c3qnfC_
50.7
27
PDB header: hydrolaseChain: C: PDB Molecule: endoplasmic reticulum aminopeptidase 1;
PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1
16 c6h56A_
50.3
23
PDB header: metal binding proteinChain: A: PDB Molecule: effector domain of pseudomonas aeruginosa vgrg2b;
PDBTitle: effector domain of pseudomonas aeruginosa vgrg2b
17 d1cxva_
45.9
25
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
18 c4wz9A_
45.6
43
PDB header: hydrolaseChain: A: PDB Molecule: agap004809-pa;
PDBTitle: apn1 from anopheles gambiae
19 c3qnfA_
45.5
29
PDB header: hydrolaseChain: A: PDB Molecule: endoplasmic reticulum aminopeptidase 1;
PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1
20 c2gtqA_
45.0
23
PDB header: hydrolaseChain: A: PDB Molecule: aminopeptidase n;
PDBTitle: crystal structure of aminopeptidase n from human pathogen neisseria2 meningitidis
21 c4gaaA_
not modelled
44.9
31
PDB header: hydrolase/hydrolase inhibitorChain: A: PDB Molecule: mgc78867 protein;
PDBTitle: structure of leukotriene a4 hydrolase from xenopus laevis complexed2 with inhibitor bestatin
22 c3k7nA_
not modelled
43.8
38
PDB header: hydrolaseChain: A: PDB Molecule: k-like;
PDBTitle: structures of two elapid snake venom metalloproteases with2 distinct activities highlight the disulfide patterns in the3 d domain of adamalysin family proteins
23 c5dllA_
not modelled
43.7
31
PDB header: hydrolaseChain: A: PDB Molecule: aminopeptidase n;
PDBTitle: aminopeptidase n (pepn) from francisella tularensis subsp. tularensis2 schu s4
24 c4dd8B_
not modelled
43.7
33
PDB header: hydrolase/hydrolase inhibitorChain: B: PDB Molecule: disintegrin and metalloproteinase domain-containing protein
PDBTitle: adam-8 metalloproteinase domain with bound batimastat
25 c3b7uX_
not modelled
43.6
20
PDB header: hydrolaseChain: X: PDB Molecule: leukotriene a-4 hydrolase;
PDBTitle: leukotriene a4 hydrolase complexed with kelatorphan
26 c3b37A_
not modelled
43.4
23
PDB header: hydrolaseChain: A: PDB Molecule: aminopeptidase n;
PDBTitle: crystal structure of e. coli aminopeptidase n in complex with tyrosine
27 d3b7sa3
not modelled
42.8
19
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Leukotriene A4 hydrolase catalytic domain
28 d1npca_
not modelled
42.4
38
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Thermolysin-like
29 d1quaa_
not modelled
42.4
27
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Reprolysin-like
30 c1yp1A_
not modelled
42.3
27
PDB header: hydrolaseChain: A: PDB Molecule: fii;
PDBTitle: crystal structure of a non-hemorrhagic fibrin(ogen)olytic2 metalloproteinase from venom of agkistrodon acutus
31 c3sksA_
not modelled
42.2
21
PDB header: hydrolaseChain: A: PDB Molecule: putative oligoendopeptidase f;
PDBTitle: crystal structure of a putative oligoendopeptidase f from bacillus2 anthracis str. ames
32 c2l0rA_
not modelled
41.9
33
PDB header: hydrolase,toxinChain: A: PDB Molecule: lethal factor;
PDBTitle: conformational dynamics of the anthrax lethal factor catalytic center
33 c3ebhA_
not modelled
40.4
31
PDB header: hydrolase inhibitorChain: A: PDB Molecule: m1 family aminopeptidase;
PDBTitle: structure of the m1 alanylaminopeptidase from malaria complexed with2 bestatin
34 c5zi7A_
not modelled
39.9
31
PDB header: hydrolaseChain: A: PDB Molecule: aminopeptidase n;
PDBTitle: crystal structure of legionella pneumophila aminopeptidase a in2 complex with glutamic acid
35 c2erpA_
not modelled
39.9
31
PDB header: toxinChain: A: PDB Molecule: vascular apoptosis-inducing protein 1;
PDBTitle: crystal structure of vascular apoptosis-inducing protein-1(inhibitor-2 bound form)
36 d1bqba_
not modelled
39.5
38
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Thermolysin-like
37 c4fgmA_
not modelled
39.2
23
PDB header: hydrolaseChain: A: PDB Molecule: aminopeptidase n family protein;
PDBTitle: crystal structure of the aminopeptidase n family protein q5qty1 from2 idiomarina loihiensis. northeast structural genomics consortium3 target ilr60.
38 d1kjpa_
not modelled
39.2
38
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Thermolysin-like
39 c4gerB_
not modelled
38.9
38
PDB header: hydrolaseChain: B: PDB Molecule: gentlyase metalloprotease;
PDBTitle: crystal structure of gentlyase, the neutral metalloprotease of2 paenibacillus polymyxa
40 c3ciaA_
not modelled
38.9
31
PDB header: hydrolaseChain: A: PDB Molecule: cold-active aminopeptidase;
PDBTitle: crystal structure of cold-aminopeptidase from colwellia2 psychrerythraea
41 c3nqxA_
not modelled
38.8
38
PDB header: hydrolaseChain: A: PDB Molecule: secreted metalloprotease mcp02;
PDBTitle: crystal structure of vibriolysin mcp-02 mature enzyme, a zinc2 metalloprotease from m4 family
42 c3nqzB_
not modelled
38.7
38
PDB header: hydrolaseChain: B: PDB Molecule: secreted metalloprotease mcp02;
PDBTitle: crystal structure of the autoprocessed vibriolysin mcp-02 with e369a2 mutation
43 c1z5hB_
not modelled
38.6
36
PDB header: hydrolaseChain: B: PDB Molecule: tricorn protease interacting factor f3;
PDBTitle: crystal structures of the tricorn interacting factor f3 from2 thermoplasma acidophilum
44 c3k7lA_
not modelled
38.5
31
PDB header: hydrolaseChain: A: PDB Molecule: atragin;
PDBTitle: structures of two elapid snake venom metalloproteases with2 distinct activities highlight the disulfide patterns in the3 d domain of adamalysin family proteins
45 c4k90A_
not modelled
38.4
50
PDB header: hydrolaseChain: A: PDB Molecule: extracellular metalloproteinase mep;
PDBTitle: extracellular metalloproteinase from aspergillus
46 d1u4ga_
not modelled
38.4
38
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Thermolysin-like
47 c2rjpC_
not modelled
38.0
22
PDB header: hydrolaseChain: C: PDB Molecule: adamts-4;
PDBTitle: crystal structure of adamts4 with inhibitor bound
48 c2vqxA_
not modelled
37.1
38
PDB header: hydrolaseChain: A: PDB Molecule: metalloproteinase;
PDBTitle: precursor of protealysin, metalloproteinase from serratia2 proteamaculans.
49 c3mdjB_
not modelled
37.1
29
PDB header: hydrolase/hydrolase inhibitorChain: B: PDB Molecule: endoplasmic reticulum aminopeptidase 1;
PDBTitle: er aminopeptidase, erap1, bound to the zinc aminopeptidase inhibitor,2 bestatin
50 c2xpyA_
not modelled
36.3
50
PDB header: hydrolaseChain: A: PDB Molecule: leukotriene a-4 hydrolase;
PDBTitle: structure of native leukotriene a4 hydrolase from saccharomyces2 cerevisiae
51 d1bqqm_
not modelled
35.7
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
52 c2xs4A_
not modelled
35.6
24
PDB header: hydrolaseChain: A: PDB Molecule: karilysin protease;
PDBTitle: structure of karilysin catalytic mmp domain in complex with magnesium
53 c4kxdA_
not modelled
35.5
36
PDB header: hydrolaseChain: A: PDB Molecule: glutamyl aminopeptidase;
PDBTitle: crystal structure of human aminopeptidase a complexed with glutamate2 and calcium
54 c2e3xA_
not modelled
35.1
33
PDB header: hydrolase, blood clotting, toxinChain: A: PDB Molecule: coagulation factor x-activating enzyme heavy chain;
PDBTitle: crystal structure of russell's viper venom metalloproteinase
55 c4fytA_
not modelled
34.2
36
PDB header: hydrolase/hydrolase inhibitorChain: A: PDB Molecule: aminopeptidase n;
PDBTitle: human aminopeptidase n (cd13) in complex with amastatin
56 d1nd1a_
not modelled
34.1
31
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Reprolysin-like
57 c3b4rA_
not modelled
34.1
30
PDB header: hydrolaseChain: A: PDB Molecule: putative zinc metalloprotease mj0392;
PDBTitle: site-2 protease from methanocaldococcus jannaschii
58 d1hova_
not modelled
33.5
17
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
59 c2xdtA_
not modelled
32.9
29
PDB header: hydrolaseChain: A: PDB Molecule: endoplasmic reticulum aminopeptidase 1;
PDBTitle: crystal structure of the soluble domain of human2 endoplasmic reticulum aminopeptidase 1 erap1
60 c3b4rB_
not modelled
32.2
30
PDB header: hydrolaseChain: B: PDB Molecule: putative zinc metalloprotease mj0392;
PDBTitle: site-2 protease from methanocaldococcus jannaschii
61 d1rm8a_
not modelled
32.1
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
62 d4aiga_
not modelled
31.8
21
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Reprolysin-like
63 d2ovxa1
not modelled
31.2
12
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
64 c4f5cA_
not modelled
31.2
36
PDB header: hydrolase/viral proteinChain: A: PDB Molecule: aminopeptidase n;
PDBTitle: crystal structure of the spike receptor binding domain of a porcine2 respiratory coronavirus in complex with the pig aminopeptidase n3 ectodomain
65 d1qiba_
not modelled
30.9
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
66 c4pj6B_
not modelled
30.7
43
PDB header: hydrolaseChain: B: PDB Molecule: leucyl-cystinyl aminopeptidase;
PDBTitle: crystal structure of human insulin regulated aminopeptidase with2 lysine in active site
67 d1wnia_
not modelled
29.9
38
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Reprolysin-like
68 c3se6A_
not modelled
28.8
36
PDB header: hydrolaseChain: A: PDB Molecule: endoplasmic reticulum aminopeptidase 2;
PDBTitle: crystal structure of the human endoplasmic reticulum aminopeptidase 2
69 c5a0sA_
not modelled
28.5
38
PDB header: hydrolaseChain: A: PDB Molecule: zinc metalloprotease zmp1;
PDBTitle: apo-structure of metalloprotease zmp1 variant e143a from clostridium2 difficile
70 c6fpcA_
not modelled
28.4
38
PDB header: hydrolaseChain: A: PDB Molecule: pro-pro endopeptidase;
PDBTitle: structure of the pro-pro endopeptidase (ppep-2) from paenibacillus2 alvei
71 c3p24C_
not modelled
28.0
21
PDB header: hydrolaseChain: C: PDB Molecule: bft-3;
PDBTitle: structure of profragilysin-3 from bacteroides fragilis
72 d1r55a_
not modelled
27.6
24
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Reprolysin-like
73 d1hv5a_
not modelled
26.0
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
74 d1lmla_
not modelled
25.3
24
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Leishmanolysin
75 d1y93a1
not modelled
25.2
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
76 d1c7ka_
not modelled
25.1
14
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Zinc protease
77 d1mmqa_
not modelled
24.6
24
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
78 d1xuca1
not modelled
24.3
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
79 d1cgla_
not modelled
23.9
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
80 c3g5cA_
not modelled
23.9
21
PDB header: membrane proteinChain: A: PDB Molecule: adam 22;
PDBTitle: structural and biochemical studies on the ectodomain of human adam22
81 d1g12a_
not modelled
23.9
23
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Fungal zinc peptidase
82 c3b8zB_
not modelled
23.6
29
PDB header: hydrolaseChain: B: PDB Molecule: protein adamts-5;
PDBTitle: high resolution crystal structure of the catalytic domain of adamts-52 (aggrecanase-2)
83 c4on1B_
not modelled
23.4
36
PDB header: hydrolaseChain: B: PDB Molecule: putative metalloprotease ii;
PDBTitle: crystal structure of metalloproteinase-ii from bacteroides fragilis
84 c4g0dD_
not modelled
22.6
12
PDB header: hydrolaseChain: D: PDB Molecule: collagenase 3;
PDBTitle: human collagenase 3 (mmp-13) full form with peptides from pro-domain
85 d1hfca_
not modelled
22.5
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
86 d1eb6a_
not modelled
22.2
31
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Fungal zinc peptidase
87 d1eaka2
not modelled
22.2
12
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
88 c5furI_
not modelled
21.6
17
PDB header: transcriptionChain: I: PDB Molecule: transcription initiation factor tfiid subunit 2;
PDBTitle: structure of human tfiid-iia bound to core promoter dna
89 d1atla_
not modelled
21.5
14
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Reprolysin-like
90 c2v4bB_
not modelled
21.2
20
PDB header: hydrolaseChain: B: PDB Molecule: adamts-1;
PDBTitle: crystal structure of human adamts-1 catalytic domain and cysteine-2 rich domain (apo-form)
91 c2x3bB_
not modelled
21.0
18
PDB header: hydrolaseChain: B: PDB Molecule: toxic extracellular endopeptidase;
PDBTitle: asap1 inactive mutant e294a, an extracellular toxic zinc2 metalloendopeptidase
92 d2di4a1
not modelled
20.6
31
Fold: FtsH protease domain-likeSuperfamily: FtsH protease domain-likeFamily: FtsH protease domain-like
93 d1bswa_
not modelled
20.1
33
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Reprolysin-like
94 d1hy7a_
not modelled
19.9
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
95 c2jsdA_
not modelled
19.7
18
PDB header: hydrolaseChain: A: PDB Molecule: matrix metalloproteinase-20;
PDBTitle: solution structure of mmp20 complexed with nngh
96 d1i76a_
not modelled
19.4
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
97 d1q3aa_
not modelled
19.1
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
98 d2i47a1
not modelled
18.5
23
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: TNF-alpha converting enzyme, TACE, catalytic domain
99 c6be6D_
not modelled
18.4
14
PDB header: membrane proteinChain: D: PDB Molecule: disintegrin and metalloproteinase domain-containing protein
PDBTitle: adam10 extracellular domain