Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1864c_(-)_2111361_2112116
DateFri Aug 2 13:30:47 BST 2019
Unique Job ID1a8ef8f27e5dba53
SequenceVTVAPRRLAW ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:49.243 Y:48.575 Z:47.596
Model (left) based on template d1o65a_
Top template information
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:MOSC (MOCO sulphurase C-terminal) domain
Confidence and coverage
Confidence:100.0% Coverage: 74%
186 residues ( 74% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1o65a_



100.0 28
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:MOSC (MOCO sulphurase C-terminal) domain
2c5yhhA_



100.0 28
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized conserved protein yiim;
PDBTitle: crystal structure of yiim from geobacillus stearothermophilus
3d1orua_



100.0 21
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:MOSC (MOCO sulphurase C-terminal) domain
4c6fw2A_



98.4 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:mitochondrial amidoxime-reducing component 1,endolysin,
PDBTitle: crystal structure of human marc1
5d2qamn1



51.7 38
Fold:Prokaryotic ribosomal protein L17
Superfamily:Prokaryotic ribosomal protein L17
Family:Prokaryotic ribosomal protein L17
6c2q8iB_



46.5 16
PDB header:transferase
Chain: B: PDB Molecule:dihydrolipoyllysine-residue acetyltransferase component of
PDBTitle: pyruvate dehydrogenase kinase isoform 3 in complex with antitumor drug2 radicicol
7c3rj1P_



37.6 33
PDB header:transcription
Chain: P: PDB Molecule:mediator of rna polymerase ii transcription subunit 17;
PDBTitle: architecture of the mediator head module
8d1jvwa_



37.1 33
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
9d1gd8a_



32.6 31
Fold:Prokaryotic ribosomal protein L17
Superfamily:Prokaryotic ribosomal protein L17
Family:Prokaryotic ribosomal protein L17
10c1vw4L_



32.3 33
PDB header:ribosome
Chain: L: PDB Molecule:54s ribosomal protein l8, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
11c2dncA_



31.0 15
PDB header:transferase
Chain: A: PDB Molecule:pyruvate dehydrogenase protein x component;
PDBTitle: solution structure of rsgi ruh-054, a lipoyl domain from2 human 2-oxoacid dehydrogenase
12d1q6ha_



30.1 29
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
13d1y8ob1



28.8 18
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
14c2vcdA_



28.3 43
PDB header:isomerase
Chain: A: PDB Molecule:outer membrane protein mip;
PDBTitle: solution structure of the fkbp-domain of legionella pneumophila mip in2 complex with rapamycin
15d1fd9a_



26.6 43
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
16d1vjea_



26.3 26
Fold:LuxS/MPP-like metallohydrolase
Superfamily:LuxS/MPP-like metallohydrolase
Family:Autoinducer-2 production protein LuxS
17c2gezE_



25.3 33
PDB header:hydrolase
Chain: E: PDB Molecule:l-asparaginase alpha subunit;
PDBTitle: crystal structure of potassium-independent plant asparaginase
18c1q6uA_



23.8 29
PDB header:isomerase
Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase fkpa;
PDBTitle: crystal structure of fkpa from escherichia coli
19d1j98a_



23.0 21
Fold:LuxS/MPP-like metallohydrolase
Superfamily:LuxS/MPP-like metallohydrolase
Family:Autoinducer-2 production protein LuxS
20c3gwqB_



21.9 29
PDB header:lyase
Chain: B: PDB Molecule:d-serine deaminase;
PDBTitle: crystal structure of a putative d-serine deaminase (bxe_a4060) from2 burkholderia xenovorans lb400 at 2.00 a resolution
21c1t3mA_



not modelled 21.8 31
PDB header:hydrolase
Chain: A: PDB Molecule:putative l-asparaginase;
PDBTitle: structure of the isoaspartyl peptidase with l-asparaginase2 activity from e. coli
22c2ke0A_



not modelled 20.0 33
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: solution structure of peptidyl-prolyl cis-trans isomerase from2 burkholderia pseudomallei
23c5i7pA_



not modelled 19.4 40
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase fkbp1a,fkbp-type
PDBTitle: crystal structure of fkbp12-if(slyd), a chimeric protein of human2 fkbp12 and the insert in flap domain of ecoli slyd
24d2cqma1



not modelled 18.9 19
Fold:Prokaryotic ribosomal protein L17
Superfamily:Prokaryotic ribosomal protein L17
Family:Prokaryotic ribosomal protein L17
25c3j3vN_



not modelled 18.8 28
PDB header:ribosome
Chain: N: PDB Molecule:50s ribosomal protein l17;
PDBTitle: atomic model of the immature 50s subunit from bacillus subtilis (state2 i-a)
26c4jysA_



not modelled 18.1 24
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: crystal structure of fkbp25 from plasmodium vivax
27c5w21B_



not modelled 16.4 24
PDB header:hydrolase/protein binding
Chain: B: PDB Molecule:fibroblast growth factor 23;
PDBTitle: crystal structure of a 1:1:1 fgf23-fgfr1c-aklotho ternary complex
28c2vn1A_



not modelled 15.9 29
PDB header:isomerase
Chain: A: PDB Molecule:70 kda peptidylprolyl isomerase;
PDBTitle: crystal structure of the fk506-binding domain of plasmodium2 falciparum fkbp35 in complex with fk506
29d2zjrk1



not modelled 15.3 40
Fold:Prokaryotic ribosomal protein L17
Superfamily:Prokaryotic ribosomal protein L17
Family:Prokaryotic ribosomal protein L17
30c2f4eB_



not modelled 14.4 19
PDB header:signaling protein
Chain: B: PDB Molecule:atfkbp42;
PDBTitle: n-terminal domain of fkbp42 from arabidopsis thaliana
31c2lgoA_



not modelled 14.2 38
PDB header:isomerase
Chain: A: PDB Molecule:fkbp;
PDBTitle: solution nmr structure of a fkbp-type peptidyl-prolyl cis-trans2 isomerase from giardia lamblia, seattle structural genomics center3 for infectious disease target gilaa.00840.a
32c2qj8B_



not modelled 14.0 14
PDB header:hydrolase
Chain: B: PDB Molecule:mlr6093 protein;
PDBTitle: crystal structure of an aspartoacylase family protein (mlr6093) from2 mesorhizobium loti maff303099 at 2.00 a resolution
33c2p39A_



not modelled 13.5 22
PDB header:signaling protein
Chain: A: PDB Molecule:fibroblast growth factor 23;
PDBTitle: crystal structure of human fgf23
34c4pu6A_



not modelled 13.4 34
PDB header:hydrolase
Chain: A: PDB Molecule:l-asparaginase alpha subunit;
PDBTitle: crystal structure of potassium-dependent plant-type l-asparaginase2 from phaseolus vulgaris in complex with k+ cations
35c4bf8A_



not modelled 13.2 19
PDB header:isomerase
Chain: A: PDB Molecule:fpr4;
PDBTitle: fpr4 ppi domain
36c4g50A_



not modelled 12.4 33
PDB header:isomerase, protein binding
Chain: A: PDB Molecule:ubiquitin-like protein smt3, peptidyl-prolyl cis-trans
PDBTitle: crystal structure of a smt fusion peptidyl-prolyl cis-trans isomerase2 with surface mutation d44g from burkholderia pseudomallei complexed3 with cj168
37c3bboP_



not modelled 11.3 37
PDB header:ribosome
Chain: P: PDB Molecule:ribosomal protein l17;
PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome
38c2egcA_



not modelled 11.1 18
PDB header:signaling protein
Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a;
PDBTitle: solution structure of the fifth sh3 domain from human2 kiaa0418 protein
39c3b7xA_



not modelled 11.1 29
PDB header:isomerase
Chain: A: PDB Molecule:fk506-binding protein 6;
PDBTitle: crystal structure of human fk506-binding protein 6
40c5hwbA_



not modelled 11.0 35
PDB header:isomerase
Chain: A: PDB Molecule:fk506-binding protein 1a;
PDBTitle: aspergillus fumigatus fkbp12 apo protein in p212121 space group
41c5e68A_



not modelled 10.4 27
PDB header:lyase
Chain: A: PDB Molecule:s-ribosylhomocysteine lyase;
PDBTitle: high resolution crystal structure of luxs - quorum sensor molecular2 complex from salmonella typhi at 1.58 angstroms
42d1wfwa_



not modelled 10.2 22
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
43c4v19R_



not modelled 10.1 19
PDB header:ribosome
Chain: R: PDB Molecule:mitoribosomal protein bl17m, mrpl17;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
44c5kodA_



not modelled 10.0 31
PDB header:ligase
Chain: A: PDB Molecule:indole-3-acetic acid-amido synthetase gh3.5;
PDBTitle: crystal structure of gh3.5 acyl acid amido synthetase from arabidopsis2 thaliana
45c3oe2A_



not modelled 10.0 29
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: 1.6 a crystal structure of peptidyl-prolyl cis-trans isomerase ppiase2 from pseudomonas syringae pv. tomato str. dc3000 (pspto dc3000)
46c6d2cB_



not modelled 9.9 47
PDB header:lyase
Chain: B: PDB Molecule:ulvan lyase;
PDBTitle: structure of ulvan lyase from nonlaben ulvanivorans- nlr48
47d1q1ca1



not modelled 9.9 33
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
48d2piaa1



not modelled 9.8 44
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Riboflavin synthase domain-like
Family:Ferredoxin reductase FAD-binding domain-like
49c1q7lB_



not modelled 9.6 19
PDB header:hydrolase
Chain: B: PDB Molecule:aminoacylase-1;
PDBTitle: zn-binding domain of the t347g mutant of human aminoacylase-2 i
50c1q1cA_



not modelled 9.6 33
PDB header:isomerase
Chain: A: PDB Molecule:fk506-binding protein 4;
PDBTitle: crystal structure of n(1-260) of human fkbp52
51c6h3iB_



not modelled 9.4 29
PDB header:protein transport
Chain: B: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: structural snapshots of the type 9 protein translocon
52c3cqtA_



not modelled 9.3 11
PDB header:transferase
Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fyn;
PDBTitle: n53i v55l mutant of fyn sh3 domain
53c2df6A_



not modelled 9.2 29
PDB header:signaling protein
Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 7;
PDBTitle: crystal structure of the sh3 domain of betapix in complex2 with a high affinity peptide from pak2
54d2ppna1



not modelled 9.1 40
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
55c2eemA_



not modelled 9.1 38
PDB header:antibiotic
Chain: A: PDB Molecule:mytilin-b;
PDBTitle: solution structure of the synthetic mytilin
56d1a1qa_



not modelled 9.0 24
Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral proteases
57c3o4aC_



not modelled 9.0 44
PDB header:de novo protein
Chain: C: PDB Molecule:de novo designed beta-trefoil architecture with symmetric
PDBTitle: crystal structure of symfoil-2: de novo designed beta-trefoil2 architecture with symmetric primary structure
58c2a8lB_



not modelled 8.8 32
PDB header:hydrolase
Chain: B: PDB Molecule:threonine aspartase 1;
PDBTitle: crystal structure of human taspase1 (t234a mutant)
59c4a0eB_



not modelled 8.8 27
PDB header:transport protein
Chain: B: PDB Molecule:type iii secretion protein;
PDBTitle: crystal structure of the cytoplasmic n-terminal domain of yersinia2 pestis yscd
60d1ng2a2



not modelled 8.6 12
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
61c1t3dB_



not modelled 8.5 25
PDB header:transferase
Chain: B: PDB Molecule:serine acetyltransferase;
PDBTitle: crystal structure of serine acetyltransferase from e.coli at 2.2a
62c3sf4F_



not modelled 8.3 40
PDB header:signaling protein/protein binding
Chain: F: PDB Molecule:protein inscuteable homolog;
PDBTitle: crystal structure of the complex between the conserved cell polarity2 proteins inscuteable and lgn
63c2bz8B_



not modelled 8.3 18
PDB header:sh3 domain
Chain: B: PDB Molecule:sh3-domain kinase binding protein 1;
PDBTitle: n-terminal sh3 domain of cin85 bound to cbl-b peptide
64d1t3da_



not modelled 8.1 25
Fold:Single-stranded left-handed beta-helix
Superfamily:Trimeric LpxA-like enzymes
Family:Serine acetyltransferase
65c3ogfA_



not modelled 8.0 47
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed dimeric trefoil-fold sub-domain which
PDBTitle: crystal structure of difoil-4p homo-trimer: de novo designed dimeric2 trefoil-fold sub-domain which forms homo-trimer assembly
66c2jmcA_



not modelled 7.9 18
PDB header:signaling protein
Chain: A: PDB Molecule:spectrin alpha chain, brain and p41 peptide
PDBTitle: chimer between spc-sh3 and p41
67d1kt0a3



not modelled 7.9 25
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
68c4rugA_



not modelled 7.7 11
PDB header:protein binding
Chain: A: PDB Molecule:slit-robo rho gtpase-activating protein 2;
PDBTitle: cyrstal structure of slit-robo rho gtpase-activating protein 22 fragment
69d1jjcb1



not modelled 7.7 19
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Domains B1 and B5 of PheRS-beta, PheT
70d1zunb1



not modelled 7.7 17
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
71c2dbmA_



not modelled 7.7 25
PDB header:transferase, signaling protein
Chain: A: PDB Molecule:sh3-containing grb2-like protein 2;
PDBTitle: solution structures of the sh3 domain of human sh3-2 containing grb2-like protein 2
72c4h62Q_



not modelled 7.6 30
PDB header:transcription
Chain: Q: PDB Molecule:mediator of rna polymerase ii transcription subunit 17;
PDBTitle: structure of the saccharomyces cerevisiae mediator subcomplex2 med17c/med11c/med22c
73c4mitE_



not modelled 7.5 8
PDB header:signaling protein
Chain: E: PDB Molecule:serine/threonine protein kinase pak, putative;
PDBTitle: crystal structure of e. histolytica racc bound to the ehpak4 pbd
74d1s0ua1



not modelled 7.5 31
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
75c4mitG_



not modelled 7.5 8
PDB header:signaling protein
Chain: G: PDB Molecule:serine/threonine protein kinase pak, putative;
PDBTitle: crystal structure of e. histolytica racc bound to the ehpak4 pbd
76c4glmD_



not modelled 7.5 22
PDB header:signaling protein
Chain: D: PDB Molecule:dynamin-binding protein;
PDBTitle: crystal structure of the sh3 domain of dnmbp protein [homo sapiens]
77c4u4hA_



not modelled 7.4 24
PDB header:viral protein
Chain: A: PDB Molecule:tegument protein ul21;
PDBTitle: crystal structure of hsv-1 ul21 n-terminal domain
78d1wdka2



not modelled 7.4 4
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:HCDH C-domain-like
79c2cucA_



not modelled 7.3 17
PDB header:signaling protein
Chain: A: PDB Molecule:sh3 domain containing ring finger 2;
PDBTitle: solution structure of the sh3 domain of the mouse2 hypothetical protein sh3rf2
80d1ddla_



not modelled 7.3 26
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Tymoviridae-like VP
81c2xmfA_



not modelled 7.3 17
PDB header:motor protein
Chain: A: PDB Molecule:myosin 1e sh3;
PDBTitle: myosin 1e sh3
82d1auya_



not modelled 7.2 21
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Tymoviridae-like VP
83c2egaA_



not modelled 7.2 22
PDB header:signaling protein
Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a;
PDBTitle: solution structure of the first sh3 domain from human2 kiaa0418 protein
84c4wfwA_



not modelled 7.0 13
PDB header:structural protein
Chain: A: PDB Molecule:general secretion pathway protein b;
PDBTitle: the crystal structure of dickeya dadantii gspb from the type 22 secretion system
85c5b8iC_



not modelled 7.0 30
PDB header:hydrolase
Chain: C: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: crystal structure of calcineurin a and calcineurin b in complex with2 fkbp12 and fk506 from coccidioides immitis rs
86c4nnkA_



not modelled 7.0 29
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: structural basis for targeting the ribosomal protein s1 of2 mycobacterium tuberculosis by pyrazinamide
87c1apyA_



not modelled 7.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:aspartylglucosaminidase;
PDBTitle: human aspartylglucosaminidase
88c4igzA_



not modelled 7.0 24
PDB header:protein binding
Chain: A: PDB Molecule:sorbin and sh3 domain-containing protein 2;
PDBTitle: crystal structure of the sh3 domain of human sorbin and sh3 domain-2 containing protein 2
89d1ue9a_



not modelled 6.9 12
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
90c2l5tA_



not modelled 6.9 15
PDB header:transferase
Chain: A: PDB Molecule:lipoamide acyltransferase;
PDBTitle: solution nmr structure of e2 lipoyl domain from thermoplasma2 acidophilum
91d1r9ha_



not modelled 6.8 24
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
92d1ujya_



not modelled 6.8 33
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
93c2d8jA_



not modelled 6.7 29
PDB header:transferase
Chain: A: PDB Molecule:fyn-related kinase;
PDBTitle: solution structure of the sh3 domain of fyn-related kinase
94c3jxvA_



not modelled 6.7 21
PDB header:isomerase
Chain: A: PDB Molecule:70 kda peptidyl-prolyl isomerase;
PDBTitle: crystal structure of the 3 fkbp domains of wheat fkbp73
95c2eyxA_



not modelled 6.7 11
PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog
PDBTitle: c-terminal sh3 domain of ct10-regulated kinase
96c1x2pA_



not modelled 6.6 12
PDB header:transferase
Chain: A: PDB Molecule:protein arginine n-methyltransferase 2;
PDBTitle: solution structure of the sh3 domain of the protein2 arginine n-methyltransferase 2
97d1hqia_



not modelled 6.5 17
Fold:Monooxygenase (hydroxylase) regulatory protein
Superfamily:Monooxygenase (hydroxylase) regulatory protein
Family:Monooxygenase (hydroxylase) regulatory protein
98c3rrrM_



not modelled 6.5 40
PDB header:viral protein
Chain: M: PDB Molecule:fusion glycoprotein f0;
PDBTitle: structure of the rsv f protein in the post-fusion conformation
99d1k8ma_



not modelled 6.5 12
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains

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