Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1876_(bfrA)_2125347_2125826
DateFri Aug 2 13:30:49 BST 2019
Unique Job ID6d912431c8a308ec
SequenceMQGDPDVLRL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.925 Y:46.875 Z:51.413
Model (left) based on template c3bknB_
Top template information
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: the structure of mycobacterial bacterioferritin
Confidence and coverage
Confidence:100.0% Coverage:100%
159 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3bknB_



100.0 87
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: the structure of mycobacterial bacterioferritin
2d2htna1



100.0 44
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
3c4am4B_



100.0 47
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: bacterioferritin from blastochloris viridis
4c5xx9A_



100.0 63
PDB header:metal transport
Chain: A: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of bacterioferritin
5d1jgca_



100.0 44
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
6c3gvyC_



100.0 48
PDB header:metal binding protein
Chain: C: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of bacterioferritin from r.sphaeroides
7d2fkza1



100.0 48
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
8c3r2rA_



100.0 41
PDB header:metal binding protein
Chain: A: PDB Molecule:bacterioferritin;
PDBTitle: 1.65a resolution structure of iron soaked ftna from pseudomonas2 aeruginosa (ph 6.0)
9c3fvbB_



100.0 47
PDB header:metal binding protein
Chain: B: PDB Molecule:bacterioferritin;
PDBTitle: crystal structure of ferritin (bacterioferritin) from brucella2 melitensis
10d1nf4a_



100.0 32
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
11d1vlga_



100.0 22
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
12d1s3qa1



100.0 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
13c3qz3A_



100.0 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferritin;
PDBTitle: the crystal structure of ferritin from vibrio cholerae o1 biovar el2 tor str. n16961
14c3qd8M_



100.0 20
PDB header:metal binding protein
Chain: M: PDB Molecule:probable bacterioferritin bfrb;
PDBTitle: crystal structure of mycobacterium tuberculosis bfrb
15c4cmyN_



100.0 18
PDB header:metal transport
Chain: N: PDB Molecule:ferritin;
PDBTitle: chlorobium tepidum ferritin
16c3e6sD_



100.0 19
PDB header:oxidoreductase
Chain: D: PDB Molecule:ferritin;
PDBTitle: crystal structure of ferritin soaked with iron from pseudo-nitzschia2 multiseries
17c3bvkC_



100.0 17
PDB header:oxidoreductase
Chain: C: PDB Molecule:ferritin;
PDBTitle: structural basis for the iron uptake mechanism of helicobacter pylori2 ferritin
18c5ouwA_



100.0 16
PDB header:metal binding protein
Chain: A: PDB Molecule:ferritin;
PDBTitle: metal free structure of synftn
19c2jd8C_



100.0 19
PDB header:metal transport
Chain: C: PDB Molecule:ferritin homolog;
PDBTitle: crystal structure of the zn-soaked ferritin from the2 hyperthermophilic archaeal anaerobe pyrococcus furiosus
20d1krqa_



100.0 20
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
21d1euma_



not modelled 100.0 23
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
22d1lb3a_



not modelled 100.0 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
23c5wpnA_



not modelled 100.0 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferritin;
PDBTitle: zn-bound structure of chaetopterus variopedatus ferritin
24c2qqyA_



not modelled 100.0 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sigma b operon;
PDBTitle: crystal structure of ferritin like, diiron-carboxylate proteins from2 bacillus anthracis str. ames
25c6a4uD_



not modelled 100.0 19
PDB header:metal binding protein
Chain: D: PDB Molecule:ferritin;
PDBTitle: the first crystal structure of crustacean ferritin that is a hybrid2 type of h and l ferritin
26d1j30a_



not modelled 100.0 22
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
27d1mfra_



not modelled 100.0 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
28d1r03a_



not modelled 100.0 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
29d2ceia1



not modelled 100.0 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
30d2za7a1



not modelled 100.0 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
31d1rcda_



not modelled 100.0 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
32c4di0B_



not modelled 100.0 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: the structure of rubrerythrin from burkholderia pseudomallei
33d1lkoa1



not modelled 100.0 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
34c2vzbA_



not modelled 100.0 21
PDB header:metal transport
Chain: A: PDB Molecule:putative bacterioferritin-related protein;
PDBTitle: a dodecameric thioferritin in the bacterial domain, characterization2 of the bacterioferritin-related protein from bacteroides fragilis
35c2clbP_



not modelled 100.0 18
PDB header:metal binding protein
Chain: P: PDB Molecule:dps-like protein;
PDBTitle: the structure of the dps-like protein from sulfolobus2 solfataricus reveals a bacterioferritin-like di-metal3 binding site within a dps-like dodecameric assembly
36d1yv1a1



not modelled 100.0 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
37c3vnxA_



not modelled 100.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferritin;
PDBTitle: crystal structure of ferritin from multicellular green algae, ulva2 pertusa.
38d1jiga_



not modelled 99.9 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
39c2c41K_



not modelled 99.9 19
PDB header:iron-binding/oxidation protein
Chain: K: PDB Molecule:dps family dna-binding stress response protein;
PDBTitle: x-ray structure of dps from thermosynechococcus elongatus
40c3a9qR_



not modelled 99.9 18
PDB header:oxidoreductase
Chain: R: PDB Molecule:
PDBTitle: crystal structure analysis of e173a variant of the soybean2 ferritin sfer4
41d1ji5a_



not modelled 99.9 23
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
42d1yuza1



not modelled 99.9 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
43c2d5kC_



not modelled 99.9 16
PDB header:metal binding protein
Chain: C: PDB Molecule:dps family protein;
PDBTitle: crystal structure of dps from staphylococcus aureus
44d1o9ra_



not modelled 99.9 17
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
45d1z6om1



not modelled 99.9 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
46c3iq1A_



not modelled 99.9 17
PDB header:metal transport
Chain: A: PDB Molecule:dps family protein;
PDBTitle: crystal structure of dps protein from vibrio cholerae o1, a member of2 a broad superfamily of ferritin-like diiron-carboxylate proteins
47c1dvbA_



not modelled 99.9 16
PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
48c5hjhB_



not modelled 99.9 23
PDB header:metal binding protein
Chain: B: PDB Molecule:ferritin, dps family protein;
PDBTitle: dps4 from nostoc punctiforme in complex with fe ions
49d1nnqa1



not modelled 99.9 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
50c2chpC_



not modelled 99.9 19
PDB header:dna binding protein
Chain: C: PDB Molecule:metalloregulation dna-binding stress protein;
PDBTitle: crystal structure of the dodecameric ferritin mrga from b. subtilis2 168
51d1tjoa_



not modelled 99.9 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
52d1n1qa_



not modelled 99.9 22
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
53c2vxxB_



not modelled 99.9 19
PDB header:dna-binding protein
Chain: B: PDB Molecule:starvation induced dna binding protein;
PDBTitle: x-ray structure of dpsa from thermosynechococcus elongatus
54c4cybI_



not modelled 99.9 13
PDB header:iron binding protein
Chain: I: PDB Molecule:putative dna protection protein;
PDBTitle: dpsc from streptomyces coelicolor
55c4cy9A_



not modelled 99.9 13
PDB header:iron-binding protein
Chain: A: PDB Molecule:dpsa;
PDBTitle: dpsa14 from streptomyces coelicolor
56d1vela_



not modelled 99.9 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
57c2wlaA_



not modelled 99.9 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:dps-like peroxide resistance protein;
PDBTitle: streptococcus pyogenes dpr
58c2xgwA_



not modelled 99.9 13
PDB header:metal binding protein
Chain: A: PDB Molecule:peroxide resistance protein;
PDBTitle: zinc-bound crystal structure of streptococcus pyogenes dpr
59c3kwoA_



not modelled 99.9 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative bacterioferritin;
PDBTitle: crystal structure of putative bacterioferritin from2 campylobacter jejuni
60c1yuzB_



not modelled 99.9 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
61c5lbhG_



not modelled 99.9 17
PDB header:transport protein
Chain: G: PDB Molecule:caip;
PDBTitle: crystal structure of helicobacter cinaedi caip
62d1ji4a_



not modelled 99.9 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
63c2c6rA_



not modelled 99.9 15
PDB header:dna-binding protein
Chain: A: PDB Molecule:dna-binding stress response protein, dps family;
PDBTitle: fe-soaked crystal structure of the dps92 from deinococcus2 radiodurans
64d2fjca1



not modelled 99.9 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
65d1dpsa_



not modelled 99.9 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
66d1umna_



not modelled 99.9 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
67d2bk6a1



not modelled 99.9 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
68c2hr5B_



not modelled 99.9 16
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
69d1z6oa1



not modelled 99.9 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
70c2f7nA_



not modelled 99.9 14
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding stress response protein, dps family;
PDBTitle: structure of d. radiodurans dps-1
71d2yw6a1



not modelled 99.9 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
72c2z90D_



not modelled 99.9 11
PDB header:dna binding protein
Chain: D: PDB Molecule:starvation-inducible dna-binding protein or fine
PDBTitle: crystal structure of the second dps from mycobacterium2 smegmatis
73c2yjkF_



not modelled 99.9 13
PDB header:metal-binding protein
Chain: F: PDB Molecule:afp;
PDBTitle: structure of dps from microbacterium arborescens in the2 high iron form
74c4a25A_



not modelled 99.9 14
PDB header:metal binding protein
Chain: A: PDB Molecule:ferritin dps family protein;
PDBTitle: x-ray structure dps from kineococcus radiotolerans in2 complex with mn (ii) ions.
75c3oghB_



not modelled 99.9 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein ycie;
PDBTitle: crystal structure of ycie protein from e. coli cft073, a member of2 ferritine-like superfamily of diiron-containing four-helix-bundle3 proteins
76c4r42B_



not modelled 99.9 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:alr3090 protein;
PDBTitle: crystal structure of katb, a manganese catalase from anabaena pcc7120
77d1bg7a_



not modelled 99.9 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
78c3qhbA_



not modelled 99.9 18
PDB header:metal transport
Chain: A: PDB Molecule:symerythrin;
PDBTitle: crystal structure of oxidized symerythrin from cyanophora paradoxa
79c2pybC_



not modelled 99.9 13
PDB header:metal transport
Chain: C: PDB Molecule:neutrophil activating protein;
PDBTitle: napa protein from borrelia burgdorferi
80d2oh3a1



not modelled 99.8 16
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:AMB4284-like
81d1jkva_



not modelled 99.8 24
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Manganese catalase (T-catalase)
82d2fzfa1



not modelled 99.7 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
83d1zs3a1



not modelled 99.7 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
84d2cwla1



not modelled 99.6 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Manganese catalase (T-catalase)
85d1zuja1



not modelled 99.6 12
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
86d1vjxa_



not modelled 99.5 18
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
87c2ib0A_



not modelled 99.3 10
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical alanine rich protein;
PDBTitle: crystal structure of a conserved hypothetical protein, rv2844, from2 mycobacterium tuberculosis
88d2ib0a1



not modelled 99.3 10
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Rv2844-like
89c4etrA_



not modelled 99.3 17
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: x-ray structure of pa2169 from pseudomonas aeruginosa
90c3hiuB_



not modelled 99.3 14
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of protein (xcc3681) from xanthomonas2 campestris pv. campestris str. atcc 33913
91c3q4nA_



not modelled 99.2 11
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein mj0754;
PDBTitle: crystal structure of hypothetical protein mj0754 from methanococcus2 jannaschii dsm 2661
92d2gyqa1



not modelled 98.9 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:YciF-like
93d2gs4a1



not modelled 98.9 13
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:YciF-like
94c5n5eM_



not modelled 98.8 18
PDB header:oxidoreductase
Chain: M: PDB Molecule:pfc_05175;
PDBTitle: crystal structure of encapsulated ferritin domain from pyrococcus2 furiosus pfc_05175
95d1afra_



not modelled 98.3 19
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
96d1za0a1



not modelled 98.2 14
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
97c5ux1D_



not modelled 98.2 13
PDB header:lyase
Chain: D: PDB Molecule:trna-(ms(2)io(6)a)-hydroxylase-like;
PDBTitle: protein 43 with aldehyde deformylating oxygenase activity from2 synechococcus
98c5da5R_



not modelled 98.1 17
PDB header:oxidoreductase
Chain: R: PDB Molecule:rru_a0973;
PDBTitle: crystal structure of rhodospirillum rubrum rru_a0973
99c5n5fC_



not modelled 98.0 16
PDB header:oxidoreductase
Chain: C: PDB Molecule:encapsulated ferritin;
PDBTitle: crystal structure of haliangium ochraceum encapsulated ferritin
100c3hl1B_



not modelled 97.9 15
PDB header:metal binding protein
Chain: B: PDB Molecule:ferritin like protein;
PDBTitle: crystal structure of a ferritin like protein (cc_0557) from2 caulobacter vibrioides at 1.95 a resolution
101d2itba1



not modelled 97.9 11
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:MiaE-like
102d1zpya1



not modelled 97.6 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:half-ferritin
103c5uwzA_



not modelled 97.4 21
PDB header:lyase
Chain: A: PDB Molecule:aldehyde decarbonylase;
PDBTitle: protein 12 with aldehyde deformylating oxygenase activity from2 gloeobacter violaceus
104c4mudA_



not modelled 97.2 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:ring oxydation complex/ phenylacetic acid degradation
PDBTitle: crystal structure of a ring oxydation complex/ phenylacetic acid2 degradation-like protein (sso1313) from sulfolobus solfataricus p2 at3 2.43 a resolution
105c1u7mB_



not modelled 97.2 27
PDB header:de novo protein
Chain: B: PDB Molecule:four-helix bundle model;
PDBTitle: solution structure of a diiron protein model: due ferri(ii)2 turn mutant
106d2oc5a1



not modelled 97.1 21
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:PMT1231-like
107c4quwA_



not modelled 97.1 19
PDB header:lyase
Chain: A: PDB Molecule:aldehyde decarbonylase;
PDBTitle: crystal structure of the apo form of cyanobacterial aldehyde-2 deformylating oxygenase
108c3fseB_



not modelled 97.0 17
PDB header:hydrolase
Chain: B: PDB Molecule:two-domain protein containing dj-1/thij/pfpi-like and
PDBTitle: crystal structure of a two-domain protein containing dj-1/thij/pfpi-2 like and ferritin-like domains (ava_4496) from anabaena variabilis3 atcc 29413 at 1.90 a resolution
109c5ux2B_



not modelled 96.8 16
PDB header:lyase
Chain: B: PDB Molecule:aldehyde decarbonylase;
PDBTitle: protein 19 with aldehyde deformylating oxidase activity from2 synechococcus
110c1lt1G_



not modelled 96.8 30
PDB header:de novo protein
Chain: G: PDB Molecule:l13g-df1;
PDBTitle: sliding helix induced change of coordination geometry in a2 model di-mn(ii) protein
111c3dhiA_



not modelled 96.7 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:toluene 4-monooxygenase hydroxylase alpha subunit;
PDBTitle: crystal structure of reduced toluene 4-monoxygenase hydroxylase2 complexed with effector protein
112d2inca1



not modelled 96.3 17
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
113c6d9fA_



not modelled 96.0 11
PDB header:lyase
Chain: A: PDB Molecule:putative vlmb homolog;
PDBTitle: protein 60 with aldehyde deformylating oxidase activity from2 kitasatospora setae
114c2vuxB_



not modelled 95.3 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 b;
PDBTitle: human ribonucleotide reductase, subunit m2 b
115c4a58B_



not modelled 94.9 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase small chain;
PDBTitle: crystal structure of a monometal state of the2 ribonucleotide-reductase small subunit from epstein-barr virus in3 orthorhombic space group
116c2hz8A_



not modelled 94.6 20
PDB header:de novo protein
Chain: A: PDB Molecule:de novo designed diiron protein;
PDBTitle: qm/mm structure refined from nmr-structure of a single2 chain diiron protein
117d1otka_



not modelled 94.6 15
Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ribonucleotide reductase-like
118c6qrzA_



not modelled 93.1 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase;
PDBTitle: crystal structure of r2-like ligand-binding oxidase from sulfolobus2 acidocaldarius solved by 3d micro-crystal electron diffraction
119c3pw1A_



not modelled 93.0 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:phenylacetic acid degradation protein paaa;
PDBTitle: the phenylacetyl-coa monooxygenase paaac subcomplex with phenylacetyl-2 coa
120c3dhgB_



not modelled 92.6 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:toluene 4-monooxygenase hydroxylase beta subunit;
PDBTitle: crystal structure of toluene 4-monoxygenase hydroxylase

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