Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1878_(glnA3)_2128029_2129381
DateFri Aug 2 13:30:49 BST 2019
Unique Job IDf0b2ee2410d8c715
SequenceMTATPLAAAA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:61.769 Y:61.475 Z:71.116
Model (left) based on template c1fpyE_
Top template information
PDB header:ligase
Chain: E: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from salmonella2 typhimurium with inhibitor phosphinothricin
Confidence and coverage
Confidence:100.0% Coverage: 94%
425 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1fpyE_
100.0 27
PDB header:ligase
Chain: E: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from salmonella2 typhimurium with inhibitor phosphinothricin
2c4hppA_
100.0 29
PDB header:ligase
Chain: A: PDB Molecule:probable glutamine synthetase;
PDBTitle: crystal structure of novel glutamine synthase homolog
3c1htoB_
100.0 26
PDB header:ligase
Chain: B: PDB Molecule:glutamine synthetase;
PDBTitle: crystallographic structure of a relaxed glutamine synthetase from2 mycobacterium tuberculosis
4c3ng0A_
100.0 23
PDB header:ligase
Chain: A: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from synechocystis sp. pcc2 6803
5c5zlpH_
100.0 22
PDB header:ligase
Chain: H: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from helicobacter pylori
6c3qajL_
100.0 25
PDB header:ligase
Chain: L: PDB Molecule:glutamine synthetase;
PDBTitle: x-ray crystal structure of glutamine synthetase from bacillus subtilis2 cocrystallized with atp
7c4s17E_
100.0 25
PDB header:ligase
Chain: E: PDB Molecule:glutamine synthetase;
PDBTitle: the crystal structure of glutamine synthetase from bifidobacterium2 adolescentis atcc 15703
8c2j9iL_
100.0 23
PDB header:ligase
Chain: L: PDB Molecule:glutamate-ammonia ligase domain-containing protein 1;
PDBTitle: lengsin is a survivor of an ancient family of class i glutamine2 synthetases in eukaryotes that has undergone evolutionary re-3 engineering for a tissue-specific role in the vertebrate eye lens.
9c5dm3A_
100.0 26
PDB header:ligase
Chain: A: PDB Molecule:l-glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from chromohalobacter2 salexigens dsm 3043(csal_0679, target efi-550015) with bound adp
10d1f52a2
100.0 28
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Glutamine synthetase catalytic domain
11d2bvca2
100.0 28
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Glutamine synthetase catalytic domain
12c2qc8J_
100.0 19
PDB header:ligase
Chain: J: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of human glutamine synthetase in complex with adp2 and methionine sulfoximine phosphate
13c4baxH_
100.0 20
PDB header:ligase
Chain: H: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from streptomyces2 coelicolor
14c2d3aJ_
100.0 19
PDB header:ligase
Chain: J: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of the maize glutamine synthetase2 complexed with adp and methionine sulfoximine phosphate
15c3fkyD_
100.0 21
PDB header:ligase
Chain: D: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of the glutamine synthetase gln1deltan182 from the yeast saccharomyces cerevisiae
16c3o6xC_
100.0 21
PDB header:ligase
Chain: C: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of the type iii glutamine synthetase from2 bacteroides fragilis
17c4is4G_
100.0 23
PDB header:ligase
Chain: G: PDB Molecule:glutamine synthetase;
PDBTitle: the glutamine synthetase from the dicotyledonous plant m. truncatula2 is a decamer
18d1f52a1
99.8 22
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Glutamine synthetase, N-terminal domain
Family:Glutamine synthetase, N-terminal domain
19d2bvca1
99.8 21
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Glutamine synthetase, N-terminal domain
Family:Glutamine synthetase, N-terminal domain
20c1tt4B_
99.1 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative cytoplasmic protein;
PDBTitle: structure of np459575, a predicted glutathione synthase from2 salmonella typhimurium
21d1tt4a_
not modelled 99.0 20
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Glutamate-cysteine ligase family 2 (GCS2)
22d1r8ga_
not modelled 98.9 21
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Glutamate-cysteine ligase family 2 (GCS2)
23c2gwcE_
not modelled 98.3 19
PDB header:ligase
Chain: E: PDB Molecule:glutamate cysteine ligase;
PDBTitle: crystal structure of plant glutamate cysteine ligase in complex with a2 transition state analogue
24d1nxia_
not modelled 63.5 19
Fold:Ferredoxin-like
Superfamily:Hypothetical protein VC0424
Family:Hypothetical protein VC0424
25c5op0B_
not modelled 56.4 11
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase ligd, polymerase domain;
PDBTitle: structure of prim-polc from mycobacterium smegmatis
26c2qw5B_
not modelled 56.2 12
PDB header:isomerase
Chain: B: PDB Molecule:xylose isomerase-like tim barrel;
PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution
27c3ln6A_
not modelled 46.5 21
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 streptococcus agalactiae
28d1u8sa2
not modelled 44.6 13
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Glycine cleavage system transcriptional repressor
29d1chua3
not modelled 40.7 15
Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
30c4aghA_
not modelled 35.8 20
PDB header:transcription
Chain: A: PDB Molecule:mosub1, transcription cofactor;
PDBTitle: structural features of ssdna binding protein mosub1 from magnaporthe2 oryzae
31c3d3aA_
not modelled 35.2 21
PDB header:hydrolase
Chain: A: PDB Molecule:beta-galactosidase;
PDBTitle: crystal structure of a beta-galactosidase from bacteroides2 thetaiotaomicron
32d1ur4a_
not modelled 29.0 11
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
33c3ke2A_
not modelled 28.5 33
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein yp_928783.1;
PDBTitle: crystal structure of a duf2131 family protein (sama_2911) from2 shewanella amazonensis sb2b at 2.50 a resolution
34d2bs2a3
not modelled 28.4 23
Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
35c3p2oA_
not modelled 28.4 24
PDB header:oxidoreductase, hydrolase
Chain: A: PDB Molecule:bifunctional protein fold;
PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni
36c3p2oB_
not modelled 27.7 24
PDB header:oxidoreductase, hydrolase
Chain: B: PDB Molecule:bifunctional protein fold;
PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni
37c2y0fD_
not modelled 26.8 39
PDB header:oxidoreductase
Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27
38c3ln7A_
not modelled 26.5 14
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 pasteurella multocida
39c1gvhA_
not modelled 23.9 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavohemoprotein;
PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket
40d1u8sa1
not modelled 21.2 13
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Glycine cleavage system transcriptional repressor
41d1foba_
not modelled 21.1 13
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
42c3it5B_
not modelled 20.8 32
PDB header:hydrolase
Chain: B: PDB Molecule:protease lasa;
PDBTitle: crystal structure of the lasa virulence factor from pseudomonas2 aeruginosa
43d1tg7a5
not modelled 20.5 18
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Glycosyl hydrolases family 35 catalytic domain
44d1zpva1
not modelled 19.8 10
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:SP0238-like
45c2jy5A_
not modelled 19.5 16
PDB header:signaling protein
Chain: A: PDB Molecule:ubiquilin-1;
PDBTitle: nmr structure of ubiquilin 1 uba domain
46d1tz9a_
not modelled 17.4 13
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:UxuA-like
47c5iwyD_
not modelled 17.2 22
PDB header:lyase
Chain: D: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase;
PDBTitle: crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate2 synthase from bacillus subtitis complexed with cmp and mg2+
48c2jepB_
not modelled 16.5 11
PDB header:hydrolase
Chain: B: PDB Molecule:xyloglucanase;
PDBTitle: native family 5 xyloglucanase from paenibacillus pabuli
49c2c2xB_
not modelled 16.3 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase-
PDBTitle: three dimensional structure of bifunctional methylenetetrahydrofolate2 dehydrogenase-cyclohydrolase from mycobacterium tuberculosis
50c2nyiB_
not modelled 15.5 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:unknown protein;
PDBTitle: crystal structure of an unknown protein from galdieria sulphuraria
51c4ae5C_
not modelled 15.4 11
PDB header:signaling protein
Chain: C: PDB Molecule:signal transduction protein trap;
PDBTitle: structure of a major regulator of staphylococcal pathogenesis
52d1neka3
not modelled 14.7 12
Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
53c4madA_
not modelled 14.5 25
PDB header:hydrolase
Chain: A: PDB Molecule:beta-galactosidase;
PDBTitle: crystal structure of beta-galactosidase c (bgac) from bacillus2 circulans atcc 31382
54c4s1aB_
not modelled 14.0 11
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a hypothetical protein cthe_0052 from2 ruminiclostridium thermocellum atcc 27405
55d1nqua_
not modelled 14.0 21
Fold:Lumazine synthase
Superfamily:Lumazine synthase
Family:Lumazine synthase
56c4e8cA_
not modelled 13.8 21
PDB header:hydrolase
Chain: A: PDB Molecule:glycosyl hydrolase, family 35;
PDBTitle: crystal structure of streptococcal beta-galactosidase in complex with2 galactose
57c6eonA_
not modelled 13.8 17
PDB header:hydrolase
Chain: A: PDB Molecule:beta-galactosidase;
PDBTitle: galactanase bt0290
58d2c0ra1
not modelled 13.8 17
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
59c4o9uB_
not modelled 13.8 19
PDB header:membrane protein
Chain: B: PDB Molecule:nad(p) transhydrogenase subunit beta;
PDBTitle: mechanism of transhydrogenase coupling proton translocation and2 hydride transfer
60c2dr1A_
not modelled 13.2 14
PDB header:transferase
Chain: A: PDB Molecule:386aa long hypothetical serine aminotransferase;
PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
61c3noyA_
not modelled 13.2 32
PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
PDBTitle: crystal structure of ispg (gcpe)
62c4bt7A_
not modelled 13.1 33
PDB header:lyase
Chain: A: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: acetolactate decarboxylase with a bound phosphate ion
63d1jjcb2
not modelled 12.6 15
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Domains B1 and B5 of PheRS-beta, PheT
64c1u8sB_
not modelled 12.3 8
PDB header:transcription
Chain: B: PDB Molecule:glycine cleavage system transcriptional
PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor
65c5f5sB_
not modelled 12.2 25
PDB header:splicing
Chain: B: PDB Molecule:microfibrillar-associated protein 1;
PDBTitle: crystal structure of the prp38-mfap1 complex of homo sapiens
66d2ez9a2
not modelled 12.1 48
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
67c3qm2A_
not modelled 12.1 21
PDB header:transferase
Chain: A: PDB Molecule:phosphoserine aminotransferase;
PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium
68d1di0a_
not modelled 12.0 21
Fold:Lumazine synthase
Superfamily:Lumazine synthase
Family:Lumazine synthase
69d2z1ea1
not modelled 11.7 13
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
70c4x0vH_
not modelled 11.5 12
PDB header:hydrolase
Chain: H: PDB Molecule:beta-1,3-1,4-glucanase;
PDBTitle: structure of a gh5 family lichenase from caldicellulosiruptor sp. f32
71c2z2vA_
not modelled 11.3 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical protein ph1688;
PDBTitle: crystal structure of l-lysine dehydrogenase from2 hyperthermophilic archaeon pyrococcus horikoshii
72d1z2la2
not modelled 11.0 8
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
73c5yhkB_
not modelled 10.8 33
PDB header:metal binding protein
Chain: B: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: crystal structure of acetolactate decarboxylase from enterbacter2 aerogenes
74c1x31D_
not modelled 10.6 21
PDB header:oxidoreductase
Chain: D: PDB Molecule:sarcosine oxidase delta subunit;
PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96
75d1q6za2
not modelled 10.6 26
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
76d2ch1a1
not modelled 10.6 7
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:Cystathionine synthase-like
77c6k0aC_
not modelled 10.2 20
PDB header:rna binding protein/rna
Chain: C: PDB Molecule:ribonuclease p protein component 3;
PDBTitle: cryo-em structure of an archaeal ribonuclease p
78d2qrda1
not modelled 10.2 21
Fold:TBP-like
Superfamily:KA1-like
Family:Ssp2 C-terminal domain-like
79c6dtfA_
not modelled 10.1 13
PDB header:peptide binding protein
Chain: A: PDB Molecule:periplasmic oligopeptide-binding protein;
PDBTitle: crystal structure of haemophilus influenzae oppa complex with kkk
80d1xv2a_
not modelled 9.9 39
Fold:AF0104/ALDC/Ptd012-like
Superfamily:AF0104/ALDC/Ptd012-like
Family:Alpha-acetolactate decarboxylase-like
81c3htnA_
not modelled 9.8 14
PDB header:metal binding protein
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: crystal structure of a putative dna binding protein (bt_1116) from2 bacteroides thetaiotaomicron vpi-5482 at 1.50 a resolution
82d1pvda2
not modelled 9.8 24
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
83c1a4iB_
not modelled 9.7 17
PDB header:oxidoreductase
Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase /
PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase
84d1jqoa_
not modelled 9.5 20
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Phosphoenolpyruvate carboxylase
85c1jqoA_
not modelled 9.5 20
PDB header:lyase
Chain: A: PDB Molecule:phosphoenolpyruvate carboxylase;
PDBTitle: crystal structure of c4-form phosphoenolpyruvate carboxylase from2 maize
86c2gu1A_
not modelled 9.5 25
PDB header:hydrolase
Chain: A: PDB Molecule:zinc peptidase;
PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
87c2igoG_
not modelled 9.5 15
PDB header:oxidoreductase
Chain: G: PDB Molecule:pyranose oxidase;
PDBTitle: crystal structure of pyranose 2-oxidase h167a mutant with 2-fluoro-2-2 deoxy-d-glucose
88d1rvv1_
not modelled 9.5 13
Fold:Lumazine synthase
Superfamily:Lumazine synthase
Family:Lumazine synthase
89c4biyD_
not modelled 9.3 13
PDB header:transferase
Chain: D: PDB Molecule:sensor protein cpxa;
PDBTitle: crystal structure of cpxahdc (monoclinic form 2)
90c3bdkB_
not modelled 9.3 18
PDB header:lyase
Chain: B: PDB Molecule:d-mannonate dehydratase;
PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue
91d1pcfa_
not modelled 9.3 15
Fold:ssDNA-binding transcriptional regulator domain
Superfamily:ssDNA-binding transcriptional regulator domain
Family:Transcriptional coactivator PC4 C-terminal domain
92c3zxqA_
not modelled 9.2 15
PDB header:transferase
Chain: A: PDB Molecule:hypoxia sensor histidine kinase response regulator dost;
PDBTitle: crystal structure of the atp-binding domain of mycobacterium2 tuberculosis dost
93d1oiza1
not modelled 9.1 17
Fold:RuvA C-terminal domain-like
Superfamily:CRAL/TRIO N-terminal domain
Family:CRAL/TRIO N-terminal domain
94c3re3B_
not modelled 9.1 19
PDB header:lyase
Chain: B: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase;
PDBTitle: crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate2 synthase from francisella tularensis
95d1a4ia2
not modelled 9.0 15
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Tetrahydrofolate dehydrogenase/cyclohydrolase
96d1prtc1
not modelled 8.8 22
Fold:OB-fold
Superfamily:Bacterial enterotoxins
Family:Bacterial AB5 toxins, B-subunits
97c5yhoA_
not modelled 8.5 33
PDB header:metal binding protein
Chain: A: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: crystal structure of acetolactate decarboxylase from enterobacter2 cloacae
98d1gvha3
not modelled 8.5 21
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:Flavohemoglobin, C-terminal domain
99c4zonB_
not modelled 8.4 31
PDB header:oxidoreductase/oxidoreductase inhibitor
Chain: B: PDB Molecule:verruculogen synthase;
PDBTitle: structure of ftmox1 with fumitremorgen b complex

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