Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1903_(-)_2150371_2150775
DateFri Aug 2 13:30:52 BST 2019
Unique Job ID8dbc9b6d63d11a37
SequenceMVPFLMRAAV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:14.739 Y:16.852 Z:19.232
Model (left) based on template c2p64B_
Top template information
PDB header:ligase
Chain: B: PDB Molecule:f-box/wd repeat protein 1a;
PDBTitle: d domain of b-trcp
Confidence and coverage
Confidence: 24.7% Coverage: 10%
13 residues ( 10% of your sequence) have been modelled with 24.7% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2p64B_



24.7 38
PDB header:ligase
Chain: B: PDB Molecule:f-box/wd repeat protein 1a;
PDBTitle: d domain of b-trcp
2d1r3jc_



23.5 14
Fold:Voltage-gated potassium channels
Superfamily:Voltage-gated potassium channels
Family:Voltage-gated potassium channels
3c6fkip_



12.2 9
PDB header:membrane protein
Chain: P: PDB Molecule:atp synthase subunit c, chloroplastic;
PDBTitle: chloroplast f1fo conformation 3
4c3jqoV_



9.6 35
PDB header:transport protein
Chain: V: PDB Molecule:traf protein;
PDBTitle: crystal structure of the outer membrane complex of a type iv secretion2 system
5c6odih_



6.9 20
PDB header:translocase
Chain: H: PDB Molecule:
PDBTitle: structure of cagy from a cryo-em reconstruction of a t4ss
6d2hkua2



6.9 30
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
7c6humP_



6.4 29
PDB header:proton transport
Chain: P: PDB Molecule:proton-translocating nadh-quinone dehydrogenase subunit p
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
8d1kf6d_



6.3 29
Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
9c2l6wA_



6.2 37
PDB header:membrane protein
Chain: A: PDB Molecule:beta-type platelet-derived growth factor receptor;
PDBTitle: pdgfr beta-tm
10c2kb1A_



5.7 14
PDB header:membrane protein
Chain: A: PDB Molecule:wsk3;
PDBTitle: nmr studies of a channel protein without membrane:2 structure and dynamics of water-solubilized kcsa
11d1u11a_



5.5 18
Fold:Flavodoxin-like
Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
12d3d31c1



5.3 18
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
13c3d31D_



5.3 18
PDB header:transport protein
Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease protein;
PDBTitle: modbc from methanosarcina acetivorans

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below