Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1906c_(-)_2152432_2152902
DateFri Aug 2 13:30:52 BST 2019
Unique Job ID68ce3d99453974d3
SequenceMRLKPAPSPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:26.478 Y:33.519 Z:20.452
Model (left) based on template c5az4A_
Top template information
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook subunit protein;
PDBTitle: crystal structure of a 79kda fragment of flge, the hook protein from2 campylobacter jejuni
Confidence and coverage
Confidence: 21.6% Coverage: 22%
34 residues ( 22% of your sequence) have been modelled with 21.6% confidence by the single highest scoring template.
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Warning: 62% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5az4A_
21.6 44
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook subunit protein;
PDBTitle: crystal structure of a 79kda fragment of flge, the hook protein from2 campylobacter jejuni
2c4kh9B_
16.6 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a duf4785 family protein (lpg0956) from2 legionella pneumophila subsp. pneumophila str. philadelphia 1 at 2.003 a resolution
3d2e74f1
16.5 47
Fold:Single transmembrane helix
Superfamily:PetM subunit of the cytochrome b6f complex
Family:PetM subunit of the cytochrome b6f complex
4d1j0ha2
15.4 11
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
5c5npyA_
13.9 22
PDB header:motor protein
Chain: A: PDB Molecule:flagellar basal body protein;
PDBTitle: crystal structure of helicobacter pylori flagellar hook protein flge2
6c2zt9F_
12.2 50
PDB header:photosynthesis
Chain: F: PDB Molecule:cytochrome b6-f complex subunit 7;
PDBTitle: crystal structure of the cytochrome b6f complex from nostoc sp. pcc2 7120
7c4h44F_
12.2 50
PDB header:photosynthesis
Chain: F: PDB Molecule:cytochrome b6-f complex subunit 7;
PDBTitle: 2.70 a cytochrome b6f complex structure from nostoc pcc 7120
8c4ogqF_
12.2 50
PDB header:electron transport
Chain: F: PDB Molecule:cytochrome b6-f complex subunit 7;
PDBTitle: internal lipid architecture of the hetero-oligomeric cytochrome b6f2 complex
9d1ht6a1
11.5 24
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
10d1z0na1
10.4 17
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:AMPK-beta glycogen binding domain-like
11c2ymvA_
10.3 36
PDB header:oxidoreductase
Chain: A: PDB Molecule:acg nitroreductase;
PDBTitle: structure of reduced m smegmatis 5246, a homologue of m.2 tuberculosis acg
12c6iujA_
10.1 14
PDB header:hydrolase
Chain: A: PDB Molecule:gh30 xylanase b;
PDBTitle: crystal structure of gh30 xylanase b from talaromyces cellulolyticus
13d1m53a1
9.4 17
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
14d1wzla2
8.9 12
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
15d1ji1a2
8.0 11
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
16c1nofA_
7.9 7
PDB header:hydrolase
Chain: A: PDB Molecule:xylanase;
PDBTitle: the first crystallographic structure of a xylanase from glycosyl2 hydrolase family 5: implications for catalysis
17c3bcwB_
7.7 17
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf861 family protein with a rmlc-like cupin2 fold (bb1179) from bordetella bronchiseptica rb50 at 1.60 a3 resolution
18c2e61A_
7.0 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:zinc finger cw-type pwwp domain protein 1;
PDBTitle: solution structure of the zf-cw domain in zinc finger cw-type pwwp2 domain protein 1
19d2j9ua1
6.8 17
Fold:Four-helical up-and-down bundle
Superfamily:VPS28 C-terminal domain-like
Family:VPS28 C-terminal domain-like
20d1zdxa1
6.7 42
Fold:FimD N-terminal domain-like
Superfamily:FimD N-terminal domain-like
Family:Usher N-domain
21c4wgkB_
not modelled 6.7 21
PDB header:hydrolase
Chain: B: PDB Molecule:neutral ceramidase;
PDBTitle: crystal structure of human neutral ceramidase with zn-bound phosphate
22d1zdva1
not modelled 6.6 42
Fold:FimD N-terminal domain-like
Superfamily:FimD N-terminal domain-like
Family:Usher N-domain
23c2j9wB_
not modelled 6.5 17
PDB header:protein transport
Chain: B: PDB Molecule:vps28-prov protein;
PDBTitle: structural insight into the escrt-i-ii link and its role in mvb2 trafficking
24c3be3A_
not modelled 6.5 50
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein belonging to pfam duf16532 from bordetella bronchiseptica
25c2xtlB_
not modelled 6.2 21
PDB header:structural protein
Chain: B: PDB Molecule:cell wall surface anchor family protein;
PDBTitle: structure of the major pilus backbone protein from streptococcus2 agalactiae
26d1uoka1
not modelled 6.0 10
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
27d2f15a1
not modelled 5.6 17
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:AMPK-beta glycogen binding domain-like
28d1ikpa2
not modelled 5.5 43
Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:ADP-ribosylating toxins
29c5kwoA_
not modelled 5.5 60
PDB header:de novo protein
Chain: A: PDB Molecule:designed peptide nc_ehe_d1;
PDBTitle: nmr solution structure of designed peptide nc_ehe_d1
30c2qg3B_
not modelled 5.2 21
PDB header:unknown function
Chain: B: PDB Molecule:upf0130 protein af_2059;
PDBTitle: crystal structure of a tyw3 methyltransferase-like protein (af_2059)2 from archaeoglobus fulgidus dsm 4304 at 1.95 a resolution
31c1tljA_
not modelled 5.1 7
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical upf0130 protein sso0622;
PDBTitle: crystal structure of conserved protein of unknown function2 sso0622 from sulfolobus solfataricus

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