Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1918c_(PPE35)_2167656_2170619
DateFri Aug 2 13:30:53 BST 2019
Unique Job ID79273149c191ed22
SequenceMHYSVLPPEI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:59.669 Y:76.140 Z:69.688
Model (left) based on template c5xfsB_
Top template information
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 18%
173 residues ( 18% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 71% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xfsB_



100.0 49
PDB header:protein transport
Chain: B: PDB Molecule:ppe family protein ppe15;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
2c2g38B_



100.0 30
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:ppe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
3d2g38b1



100.0 30
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PPE
4c4xy3A_



100.0 16
PDB header:protein transport
Chain: A: PDB Molecule:esx-1 secretion-associated protein espb;
PDBTitle: structure of esx-1 secreted protein espb
5c4wj2A_



97.5 15
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
6c2vs0B_



97.2 8
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
7c4iogD_



97.1 14
PDB header:unknown function
Chain: D: PDB Molecule:secreted protein esxb;
PDBTitle: the crystal structure of a secreted protein esxb (wild-type, in p212 space group) from bacillus anthracis str. sterne
8c3gvmA_



96.9 11
PDB header:viral protein
Chain: A: PDB Molecule:putative uncharacterized protein sag1039;
PDBTitle: structure of the homodimeric wxg-100 family protein from streptococcus2 agalactiae
9c3zbhC_



96.7 14
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
10d1wa8a1



96.4 14
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
11c4lwsA_



85.8 15
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
12c4lwsB_



85.4 8
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: esxa : esxb (semet) hetero-dimer from thermomonospora curvata
13d1wa8b1



84.7 18
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
14d1ui5a2



73.9 28
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
15c2kg7B_



69.9 19
PDB header:unknown function
Chain: B: PDB Molecule:esat-6-like protein esxh;
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
16c4i0xA_



67.0 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein mab_3112;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
17c3jywF_



47.8 39
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7(a);
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
18c2vsnB_



44.5 11
PDB header:transferase
Chain: B: PDB Molecule:xcogt;
PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation
19c3pe3D_



42.8 14
PDB header:transferase
Chain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n-
PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate
20c5djsA_



40.6 18
PDB header:transferase
Chain: A: PDB Molecule:tetratricopeptide tpr_2 repeat protein;
PDBTitle: thermobaculum terrenum o-glcnac transferase mutant - k341m
21c4i0xJ_



not modelled 34.8 18
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
22c1bkvA_



not modelled 23.4 50
PDB header:structural protein
Chain: A: PDB Molecule:t3-785;
PDBTitle: collagen
23c5frgA_



not modelled 22.5 63
PDB header:protein binding
Chain: A: PDB Molecule:formin-binding protein 1-like;
PDBTitle: the nmr structure of the cdc42-interacting region of toca1
24c1bkvB_



not modelled 22.0 50
PDB header:structural protein
Chain: B: PDB Molecule:t3-785;
PDBTitle: collagen
25c1bkvC_



not modelled 22.0 50
PDB header:structural protein
Chain: C: PDB Molecule:t3-785;
PDBTitle: collagen
26d3cx5d1



not modelled 21.1 28
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Cytochrome bc1 domain
27d1ppjd1



not modelled 20.9 25
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:Cytochrome bc1 domain
28c2kg7A_



not modelled 18.9 38
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein esxg (pe family protein);
PDBTitle: structure and features of the complex formed by the tuberculosis2 virulence factors rv0287 and rv0288
29d1luaa2



not modelled 16.9 27
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Methylene-tetrahydromethanopterin dehydrogenase
30c4b3yB_



not modelled 15.1 14
PDB header:transferase
Chain: B: PDB Molecule:fatty acid synthase;
PDBTitle: cryo-em structure of the mycobacterial fatty acid synthase
31d1hi9a_



not modelled 14.5 25
Fold:Dipeptide transport protein
Superfamily:Dipeptide transport protein
Family:Dipeptide transport protein
32c2ke4A_



not modelled 14.5 63
PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
33c3ahrA_



not modelled 13.8 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:ero1-like protein alpha;
PDBTitle: inactive human ero1
34d2a15a1



not modelled 12.7 22
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
35c3cwbQ_



not modelled 12.5 25
PDB header:oxidoreductase
Chain: Q: PDB Molecule:mitochondrial cytochrome c1, heme protein;
PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d
36c3h6pB_



not modelled 12.0 34
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:esat-6 like protein esxs;
PDBTitle: crystal structure of rv3019c-rv3020c from mycobacterium tuberculosis
37c4yk2B_



not modelled 11.3 24
PDB header:protein binding
Chain: B: PDB Molecule:bartonella effector protein (bep) substrate of virb t4ss;
PDBTitle: crystal structure of the bid domain of bep9 from bartonella2 clarridgeiae
38c1zrtD_



not modelled 11.3 44
PDB header:oxidoreductase/metal transport
Chain: D: PDB Molecule:cytochrome c1;
PDBTitle: rhodobacter capsulatus cytochrome bc1 complex with2 stigmatellin bound
39d3cnxa1



not modelled 11.1 16
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SAV4671-like
40c2kwuA_



not modelled 10.9 31
PDB header:protein binding/signaling protein
Chain: A: PDB Molecule:dna polymerase iota;
PDBTitle: solution structure of ubm2 of murine polymerase iota in complex with2 ubiquitin
41d1rp4a_



not modelled 10.9 23
Fold:ERO1-like
Superfamily:ERO1-like
Family:ERO1-like
42c3fpjA_



not modelled 10.6 11
PDB header:biosynthetic protein, transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of e81q mutant of mtnas in complex with s-2 adenosylmethionine
43c5uc0B_



not modelled 10.5 80
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein cog5400;
PDBTitle: crystal structure of beta-barrel-like, uncharacterized protein of2 cog5400 from brucella abortus
44c4rqoB_



not modelled 10.5 32
PDB header:lyase
Chain: B: PDB Molecule:l-serine dehydratase;
PDBTitle: crystal structure of l-serine dehydratase from legionella pneumophila
45c5ddwD_



not modelled 10.3 20
PDB header:transferase
Chain: D: PDB Molecule:crmg;
PDBTitle: crystal structure of aminotransferase crmg from actinoalloteichus sp.2 wh1-2216-6 in complex with the pmp external aldimine adduct with3 caerulomycin m
46c2lyyB_



not modelled 10.2 27
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of the protein nb7890a from shewanella sp
47c1p84D_



not modelled 10.2 31
PDB header:oxidoreductase
Chain: D: PDB Molecule:cytochrome c1, heme protein;
PDBTitle: hdbt inhibited yeast cytochrome bc1 complex
48c5lzkB_



not modelled 10.0 4
PDB header:structural genomics
Chain: B: PDB Molecule:protein fam83b;
PDBTitle: structure of the domain of unknown function duf1669 from human fam83b
49c2pheC_



not modelled 9.7 31
PDB header:transcription
Chain: C: PDB Molecule:alpha trans-inducing protein;
PDBTitle: model for vp16 binding to pc4
50c2l5bA_



not modelled 9.5 56
PDB header:apoptosis
Chain: A: PDB Molecule:activator of apoptosis harakiri;
PDBTitle: solution structure of the transmembrane domain of bcl-2 member2 harakiri in micelles
51c5jn6A_



not modelled 9.5 56
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the nmr solution structure of rpa3313
52c1fqvK_



not modelled 9.2 30
PDB header:ligase
Chain: K: PDB Molecule:skp2;
PDBTitle: insights into scf ubiquitin ligases from the structure of2 the skp1-skp2 complex
53c5ig0A_



not modelled 8.7 15
PDB header:transferase
Chain: A: PDB Molecule:camk/camk2 protein kinase;
PDBTitle: crystal structure of s. rosetta camkii hub
54c3bkhA_



not modelled 8.4 18
PDB header:hydrolase
Chain: A: PDB Molecule:lytic transglycosylase;
PDBTitle: crystal structure of the bacteriophage phikz lytic2 transglycosylase, gp144
55c4y9iA_



not modelled 8.3 33
PDB header:oxidoreductase
Chain: A: PDB Molecule:mycobacterium tuberculosis paralogous family 11;
PDBTitle: structure of f420-h2 dependent reductase (fdr-a) msmeg_2027
56d1g03a_



not modelled 8.2 20
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
57c4k8nF_



not modelled 8.2 21
PDB header:lipid transport
Chain: F: PDB Molecule:glycolipid transfer protein domain-containing protein 1;
PDBTitle: crystal structure of human ceramide-1-phosphate transfer protein2 (cptp) in complex with 18:1 ceramide-1-phosphate (18:1-c1p)
58c3b5oA_



not modelled 7.8 38
PDB header:oxidoreductase
Chain: A: PDB Molecule:cadd-like protein of unknown function;
PDBTitle: crystal structure of a cadd-like protein of unknown function2 (npun_f6505) from nostoc punctiforme pcc 73102 at 1.35 a resolution
59c3h96B_



not modelled 7.7 0
PDB header:flavoprotein
Chain: B: PDB Molecule:f420-h2 dependent reductase a;
PDBTitle: msmeg_3358 f420 reductase
60d1swxa_



not modelled 7.6 28
Fold:Glycolipid transfer protein, GLTP
Superfamily:Glycolipid transfer protein, GLTP
Family:Glycolipid transfer protein, GLTP
61d1xkna_



not modelled 7.6 17
Fold:Pentein, beta/alpha-propeller
Superfamily:Pentein
Family:Porphyromonas-type peptidylarginine deiminase
62d1byra_



not modelled 7.6 22
Fold:Phospholipase D/nuclease
Superfamily:Phospholipase D/nuclease
Family:Nuclease
63c3j21Y_



not modelled 7.6 31
PDB header:ribosome
Chain: Y: PDB Molecule:50s ribosomal protein l30p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
64c2i3fA_



not modelled 7.5 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:glycolipid transfer-like protein;
PDBTitle: crystal structure of a glycolipid transfer-like protein from galdieria2 sulphuraria
65c4urjA_



not modelled 7.5 13
PDB header:unknown function
Chain: A: PDB Molecule:protein fam83a;
PDBTitle: crystal structure of human bj-tsa-9
66c4i6jB_



not modelled 7.5 22
PDB header:transcription
Chain: B: PDB Molecule:f-box/lrr-repeat protein 3;
PDBTitle: a ubiquitin ligase-substrate complex
67c5kdiA_



not modelled 7.4 12
PDB header:lipid transport
Chain: A: PDB Molecule:pleckstrin homology domain-containing family a member 8;
PDBTitle: how fapp2 selects simple glycosphingolipids using the gltp-fold
68c3dfuB_



not modelled 7.2 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:uncharacterized protein from 6-phosphogluconate
PDBTitle: crystal structure of a putative rossmann-like dehydrogenase (cgl2689)2 from corynebacterium glutamicum at 2.07 a resolution
69c5i4rA_



not modelled 7.1 43
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:contact-dependent inhibitor a;
PDBTitle: contact-dependent inhibition system from escherichia coli nc101 -2 ternary cdia/cdii/ef-tu complex (trypsin-modified)
70c3lhoA_



not modelled 7.1 33
PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of putative hydrolase (yp_751971.1) from shewanella2 frigidimarina ncimb 400 at 1.80 a resolution
71c3j3bF_



not modelled 7.0 31
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7;
PDBTitle: structure of the human 60s ribosomal proteins
72c4lrvL_



not modelled 6.9 40
PDB header:dna binding protein
Chain: L: PDB Molecule:dna sulfur modification protein dnde;
PDBTitle: crystal structure of dnde from escherichia coli b7a involved in dna2 phosphorothioation modification
73c4fe1M_



not modelled 6.9 50
PDB header:photosynthesis
Chain: M: PDB Molecule:photosystem i reaction center subunit xii;
PDBTitle: improving the accuracy of macromolecular structure refinement at 7 a2 resolution
74d1jb0m_



not modelled 6.9 50
Fold:Single transmembrane helix
Superfamily:Subunit XII of photosystem I reaction centre, PsaM
Family:Subunit XII of photosystem I reaction centre, PsaM
75c1jb0M_



not modelled 6.9 50
PDB header:photosynthesis
Chain: M: PDB Molecule:photosystem 1 reaction centre subunit xii;
PDBTitle: crystal structure of photosystem i: a photosynthetic reaction center2 and core antenna system from cyanobacteria
76c3j39F_



not modelled 6.8 31
PDB header:ribosome
Chain: F: PDB Molecule:60s ribosomal protein l7;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
77c2lkqA_



not modelled 6.8 56
PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin lambda-like polypeptide 1;
PDBTitle: nmr structure of the lambda 5 22-45 peptide
78c6ajrA_



not modelled 6.8 18
PDB header:dna binding protein
Chain: A: PDB Molecule:uracil dna glycosylase superfamily protein;
PDBTitle: complex form of uracil dna glycosylase x and uracil
79c3i5tB_



not modelled 6.7 17
PDB header:transferase
Chain: B: PDB Molecule:aminotransferase;
PDBTitle: crystal structure of aminotransferase prk07036 from rhodobacter2 sphaeroides kd131
80c2mtyA_



not modelled 6.7 29
PDB header:peptide binding
Chain: A: PDB Molecule:starp antigen;
PDBTitle: 3d structure determination of starp peptides implicated in p.2 falciparum invasion of hepatic cells
81c2k2uB_



not modelled 6.7 33
PDB header:transcription
Chain: B: PDB Molecule:alpha trans-inducing protein;
PDBTitle: nmr structure of the complex between tfb1 subunit of tfiih2 and the activation domain of vp16
82c5kdmD_



not modelled 6.6 36
PDB header:chaperone / dna binding protein
Chain: D: PDB Molecule:major tegument protein;
PDBTitle: crystal structure of ebv tegument protein bnrf1 in complex with2 histone chaperone daxx and histones h3.3-h4
83d1c52a_



not modelled 6.5 22
Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
84c1fs1A_



not modelled 6.5 38
PDB header:ligase
Chain: A: PDB Molecule:cyclin a/cdk2-associated p19;
PDBTitle: insights into scf ubiquitin ligases from the structure of2 the skp1-skp2 complex
85d1fs1a1



not modelled 6.5 38
Fold:F-box domain
Superfamily:F-box domain
Family:F-box domain
86c6ijoH_



not modelled 6.5 14
PDB header:photosynthesis
Chain: H: PDB Molecule:psah;
PDBTitle: photosystem i of chlamydomonas reinhardtii
87c4p3gC_



not modelled 6.4 33
PDB header:rna binding protein
Chain: C: PDB Molecule:signal recognition particle subunit srp68;
PDBTitle: structure of the srp68-rbd from chaetomium thermophilum
88c2iu1A_



not modelled 6.3 28
PDB header:transcription
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5;
PDBTitle: crystal structure of eif5 c-terminal domain
89c4jzaB_



not modelled 6.3 53
PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a legionella phosphoinositide phosphatase:2 insights into lipid metabolism in pathogen host interaction
90c3r5zB_



not modelled 6.3 17
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure of a deazaflavin-dependent reductase from nocardia2 farcinica, with co-factor f420
91d2g38a1



not modelled 6.2 13
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
92c2g38A_



not modelled 6.2 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
93c1t3mA_



not modelled 6.0 9
PDB header:hydrolase
Chain: A: PDB Molecule:putative l-asparaginase;
PDBTitle: structure of the isoaspartyl peptidase with l-asparaginase2 activity from e. coli
94c3q3hA_



not modelled 5.9 14
PDB header:transferase
Chain: A: PDB Molecule:hmw1c-like glycosyltransferase;
PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc
95c4nl6C_



not modelled 5.8 57
PDB header:splicing
Chain: C: PDB Molecule:survival motor neuron protein;
PDBTitle: structure of the full-length form of the protein smn found in healthy2 patients
96d2z0da1



not modelled 5.8 37
Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Autophagin-like
97c3e4pB_



not modelled 5.8 19
PDB header:transferase
Chain: B: PDB Molecule:c4-dicarboxylate transport sensor protein dctb;
PDBTitle: crystal structure of malonate occupied dctb
98c2m0qA_



not modelled 5.8 53
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e member 2;
PDBTitle: solution nmr analysis of intact kcne2 in detergent micelles2 demonstrate a straight transmembrane helix
99c2ch0A_



not modelled 5.8 60
PDB header:nuclear protein
Chain: A: PDB Molecule:inner nuclear membrane protein man1;
PDBTitle: solution structure of the human man1 c-terminal domain (residues 655-2 775)

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Transmembrane helix prediction 

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