Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1920_(-)_2171630_2172493
DateFri Aug 2 13:30:54 BST 2019
Unique Job ID24abcae64e7c6caf
SequenceVFPRWPQQAH ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.514 Y:50.774 Z:40.929
Model (left) based on template c5kymA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:1-acyl-sn-glycerol-3-phosphate acyltransferase;
PDBTitle: crystal structure of the 1-acyl-sn-glycerophosphate (lpa)2 acyltransferase, plsc, from thermotoga maritima
Confidence and coverage
Confidence:100.0% Coverage: 60%
171 residues ( 60% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5kymA_



100.0 26
PDB header:transferase
Chain: A: PDB Molecule:1-acyl-sn-glycerol-3-phosphate acyltransferase;
PDBTitle: crystal structure of the 1-acyl-sn-glycerophosphate (lpa)2 acyltransferase, plsc, from thermotoga maritima
2c5f34A_



99.2 16
PDB header:transferase
Chain: A: PDB Molecule:phosphatidylinositol mannoside acyltransferase;
PDBTitle: crystal structure of membrane associated pata from mycobacterium2 smegmatis in complex with s-hexadecyl coenzyme a - p21 space group
3c5knkB_



98.9 13
PDB header:transferase
Chain: B: PDB Molecule:lipid a biosynthesis lauroyl acyltransferase;
PDBTitle: lipid a secondary acyltransferase lpxm from acinetobacter baumannii2 with catalytic residue substitution (e127a)
4d1iuqa_



98.0 18
Fold:Glycerol-3-phosphate (1)-acyltransferase
Superfamily:Glycerol-3-phosphate (1)-acyltransferase
Family:Glycerol-3-phosphate (1)-acyltransferase
5c2dp3A_



52.0 13
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of a double mutant (c202a/a198v) of triosephosphate2 isomerase from giardia lamblia
6d1ttja_



44.8 15
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
7c3qstA_



44.5 12
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase, putative;
PDBTitle: crystal structure of trichomonas vaginalis triosephosphate isomerase2 tvag_096350 gene (val-45 variant)
8c4ohqB_



42.3 13
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase, chloroplastic;
PDBTitle: crystal structure of chloroplast triose phosphate isomerase from2 arabidopsis thaliana
9c4x22A_



41.5 13
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of leptospira interrogans triosephosphate isomerase2 (litim)
10c4mknA_



40.6 13
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of chloroplastic triosephosphate isomerase from2 chlamydomonas reinhardtii at 1.1 a of resolution
11c5eywB_



40.0 11
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of litopenaeus vannamei triosephosphate isomerase2 complexed with 2-phosphoglycolic acid
12d1np7a2



37.6 11
Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
13c4wbdA_



37.0 17
PDB header:ligase
Chain: A: PDB Molecule:bshc;
PDBTitle: the crystal structure of bshc from bacillus subtilis complexed with2 citrate and adp
14d1suxa_



36.2 17
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
15c1yyaA_



35.5 19
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of tt0473, putative triosephosphate isomerase from2 thermus thermophilus hb8
16c5uprA_



35.2 8
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase;
PDBTitle: x-ray structure of a putative triosephosphate isomerase from2 toxoplasma gondii me49
17d1m6ja_



33.7 15
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
18c4y8fA_



33.6 16
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from clostridium2 perfringens
19c1zggA_



32.5 10
PDB header:hydrolase
Chain: A: PDB Molecule:putative low molecular weight protein-tyrosine-
PDBTitle: solution structure of a low molecular weight protein2 tyrosine phosphatase from bacillus subtilis
20c4etiA_



32.5 10
PDB header:hydrolase
Chain: A: PDB Molecule:low molecular weight protein-tyrosine-phosphatase ywle;
PDBTitle: crystal structure of ywle from bacillus subtilis
21c3m9yB_



not modelled 31.2 15
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from methicillin2 resistant staphylococcus aureus at 1.9 angstrom resolution
22d1o5xa_



not modelled 30.7 10
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
23d1sw3a_



not modelled 30.5 14
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
24d1r2ra_



not modelled 30.3 14
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
25d1n55a_



not modelled 29.9 15
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
26c5zg5B_



not modelled 28.8 12
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase sadsubaaa mutant from2 opisthorchis viverrini
27c5ibxB_



not modelled 28.0 16
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: 1.65 angstrom crystal structure of triosephosphate isomerase (tim)2 from streptococcus pneumoniae
28d1mo0a_



not modelled 25.5 15
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
29c3krsB_



not modelled 25.3 10
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: structure of triosephosphate isomerase from cryptosporidium parvum at2 1.55a resolution
30d1b9ba_



not modelled 24.4 15
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
31c4y9aB_



not modelled 24.1 17
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from streptomyces2 coelicolor
32d1kv5a_



not modelled 22.8 15
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
33c4y96B_



not modelled 22.2 13
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from gemmata2 obscuriglobus
34c3gvgA_



not modelled 20.1 13
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from mycobacterium2 tuberculosis
35c4obtA_



not modelled 19.9 14
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase, cytosolic;
PDBTitle: crystal structure of arabidopsis thaliana cytosolic triose phosphate2 isomerase
36c1np7A_



not modelled 18.9 11
PDB header:lyase
Chain: A: PDB Molecule:dna photolyase;
PDBTitle: crystal structure analysis of synechocystis sp. pcc6803 cryptochrome
37c2kelB_



not modelled 18.3 33
PDB header:transcription repressor
Chain: B: PDB Molecule:uncharacterized protein 56b;
PDBTitle: structure of the transcription regulator svtr from the2 hyperthermophilic archaeal virus sirv1
38d2btma_



not modelled 15.9 16
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
39c3bq9A_



not modelled 15.7 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted rossmann fold nucleotide-binding domain-
PDBTitle: crystal structure of predicted nucleotide-binding protein from2 idiomarina baltica os145
40c6gfmA_



not modelled 13.1 16
PDB header:hydrolase
Chain: A: PDB Molecule:pyrimidine/purine nucleotide 5'-monophosphate nucleosidase;
PDBTitle: crystal structure of the escherichia coli nucleosidase ppnn (pppgpp-2 form)
41d1trea_



not modelled 12.9 13
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
42c5ujwD_



not modelled 11.8 15
PDB header:isomerase
Chain: D: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from francisella2 tularensis subsp. tularensis schu s4
43d1aw1a_



not modelled 10.8 18
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
44c4g1kB_



not modelled 9.9 16
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from burkholderia2 thailandensis
45c2fekA_



not modelled 9.1 8
PDB header:hydrolase
Chain: A: PDB Molecule:low molecular weight protein-tyrosine-
PDBTitle: structure of a protein tyrosine phosphatase
46c4y90B_



not modelled 9.0 18
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from deinococcus2 radiodurans
47c2g18K_



not modelled 8.7 10
PDB header:oxidoreductase
Chain: K: PDB Molecule:phycocyanobilin:ferredoxin oxidoreductase;
PDBTitle: crystal structure of nostoc sp. 7120 phycocyanobilin:ferredoxin2 oxidoreductase (pcya) apoprotein
48c3th6B_



not modelled 8.0 11
PDB header:isomerase
Chain: B: PDB Molecule:triosephosphate isomerase;
PDBTitle: crystal structure of triosephosphate isomerase from rhipicephalus2 (boophilus) microplus.
49c1r0lD_



not modelled 7.7 23
PDB header:oxidoreductase
Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase;
PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis2 in complex with nadph
50c3gh1A_



not modelled 7.5 20
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:predicted nucleotide-binding protein;
PDBTitle: crystal structure of predicted nucleotide-binding protein from vibrio2 cholerae
51c1f0xA_



not modelled 7.4 37
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-lactate dehydrogenase;
PDBTitle: crystal structure of d-lactate dehydrogenase, a peripheral membrane2 respiratory enzyme.
52c6bveA_



not modelled 7.3 21
PDB header:isomerase
Chain: A: PDB Molecule:triosephosphate isomerase;
PDBTitle: triosephosphate isomerase of synechocystis in complex with 2-2 phosphoglycolic acid
53d1t33a2



not modelled 6.9 11
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
54c1yj5B_



not modelled 6.9 18
PDB header:transferase
Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain;
PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
55d2ioja1



not modelled 6.7 21
Fold:MurF and HprK N-domain-like
Superfamily:HprK N-terminal domain-like
Family:DRTGG domain
56d1neya_



not modelled 6.5 9
Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
57c2d1eA_



not modelled 6.4 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:phycocyanobilin:ferredoxin oxidoreductase;
PDBTitle: crystal structure of pcya-biliverdin complex
58d1bg5a1



not modelled 6.3 22
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
59d1v7za_



not modelled 6.3 21
Fold:Creatininase
Superfamily:Creatininase
Family:Creatininase
60c4picA_



not modelled 5.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:arginine phosphatase ywle;
PDBTitle: ywle arginine phosphatase from geobacillus stearothermophilus
61c1emsB_



not modelled 5.5 8
PDB header:antitumor protein
Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein;
PDBTitle: crystal structure of the c. elegans nitfhit protein
62d2q8za1



not modelled 5.4 17
Fold:TIM beta/alpha-barrel
Superfamily:Ribulose-phoshate binding barrel
Family:Decarboxylase
63c4ug3C_



not modelled 5.4 3
PDB header:cell cycle
Chain: C: PDB Molecule:cell cycle protein gpsb;
PDBTitle: b. subtilis gpsb n-terminal domain
64c4bc9C_



not modelled 5.3 33
PDB header:transferase
Chain: C: PDB Molecule:alkyldihydroxyacetonephosphate synthase, peroxisomal;
PDBTitle: mammalian alkyldihydroxyacetonephosphate synthase: wild-type, adduct2 with cyanoethyl

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