Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1924c_(-)_2176557_2176937
DateFri Aug 2 13:30:54 BST 2019
Unique Job IDa1891b8907d456cd
SequenceMDPADVINPT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:22.457 Y:50.032 Z:26.050
Model (left) based on template c4a0zA_
Top template information
PDB header:transcription
Chain: A: PDB Molecule:transcription factor fapr;
PDBTitle: structure of the global transcription regulator fapr from2 staphylococcus aureus in complex with malonyl-coa
Confidence and coverage
Confidence: 42.0% Coverage: 48%
60 residues ( 48% of your sequence) have been modelled with 42.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4a0zA_



42.0 30
PDB header:transcription
Chain: A: PDB Molecule:transcription factor fapr;
PDBTitle: structure of the global transcription regulator fapr from2 staphylococcus aureus in complex with malonyl-coa
2c5lc5d_



24.5 41
PDB header:oxidoreductase
Chain: D: PDB Molecule:nadh dehydrogenase [ubiquinone] iron-sulfur protein 2,
PDBTitle: structure of mammalian respiratory complex i, class2
3c5ldwd_



22.3 41
PDB header:oxidoreductase
Chain: D: PDB Molecule:nadh dehydrogenase [ubiquinone] iron-sulfur protein 2,
PDBTitle: structure of mammalian respiratory complex i, class1
4c5ldxd_



22.3 41
PDB header:oxidoreductase
Chain: D: PDB Molecule:nadh dehydrogenase [ubiquinone] iron-sulfur protein 2,
PDBTitle: structure of mammalian respiratory complex i, class3.
5c5h35C_



19.9 17
PDB header:immune system/membrane protein
Chain: C: PDB Molecule:membrane protein tric;
PDBTitle: crystal structures of the tric trimeric intracellular cation channel2 orthologue from sulfolobus solfataricus
6d1uj8a1



16.9 50
Fold:Another 3-helical bundle
Superfamily:IscX-like
Family:IscX-like
7c2jynA_



13.3 50
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0368 protein ypl225w;
PDBTitle: a novel solution nmr structure of protein yst0336 from2 saccharomyces cerevisiae. northeast structural genomics3 consortium target yt51/ontario centre for structural4 proteomics target yst0336
8d1fiua_



12.8 50
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Restriction endonuclease NgoIV
9c6jo5I_



8.4 53
PDB header:photosynthesis
Chain: I: PDB Molecule:photosystem i reaction center subunit viii;
PDBTitle: structure of the green algal photosystem i supercomplex with light-2 harvesting complex i
10c6ijoI_



7.9 53
PDB header:photosynthesis
Chain: I: PDB Molecule:psai;
PDBTitle: photosystem i of chlamydomonas reinhardtii
11d1o82a_



6.2 45
Fold:Saposin-like
Superfamily:Bacteriocin AS-48
Family:Bacteriocin AS-48
12c4h1wB_



5.0 54
PDB header:hydrolase/hydrolase regulator
Chain: B: PDB Molecule:sarcolipin;
PDBTitle: e1 structure of the (sr) ca2+-atpase in complex with sarcolipin

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below