Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1926c_(mpt63)_2178964_2179443
DateFri Aug 2 13:30:54 BST 2019
Unique Job IDef52a856713e2637
SequenceMKLTTMIKTA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.225 Y:39.929 Z:29.692
Model (left) based on template d1lmia_
Top template information
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Antigen MPT63/MPB63 (immunoprotective extracellular protein)
Family:Antigen MPT63/MPB63 (immunoprotective extracellular protein)
Confidence and coverage
Confidence:100.0% Coverage: 82%
131 residues ( 82% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1lmia_



100.0 99
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Antigen MPT63/MPB63 (immunoprotective extracellular protein)
Family:Antigen MPT63/MPB63 (immunoprotective extracellular protein)
2c3cfuA_



95.8 15
PDB header:lipoprotein
Chain: A: PDB Molecule:uncharacterized lipoprotein yjha;
PDBTitle: crystal structure of the yjha protein from bacillus subtilis.2 northeast structural genomics consortium target sr562
3c4r4gA_



76.0 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative lipoprotein ycda;
PDBTitle: crystal structure of a putative lipoprotein (ycda) from bacillus2 subtilis subsp. subtilis str. 168 at 2.62 a resolution
4d1ix2a_



74.6 31
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Copper resistance protein C (CopC, PcoC)
5c6nfqC_



71.6 50
PDB header:metal binding protein
Chain: C: PDB Molecule:copc;
PDBTitle: copc from pseudomonas fluorescens
6c5icuA_



69.2 35
PDB header:chaperone
Chain: A: PDB Molecule:copc;
PDBTitle: the crystal structure of copc from methylosinus trichosporium ob3b
7d2c9qa1



64.9 43
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Copper resistance protein C (CopC, PcoC)
8c4lesA_



59.0 10
PDB header:unknown function
Chain: A: PDB Molecule:protein - conserved hypothetical;
PDBTitle: 2.2 angstrom crystal structure of conserved hypothetical protein from2 bacillus anthracis.
9c1avcA_



35.7 41
PDB header:calcium/phospholipid-binding protein
Chain: A: PDB Molecule:annexin vi;
PDBTitle: bovine annexin vi (calcium-bound)
10c4o3vA_



35.2 14
PDB header:protein transport
Chain: A: PDB Molecule:virb8-like protein of type iv secretion system;
PDBTitle: crystal structure of a virb8-like protein of type iv secretion system2 from rickettsia typhi
11c5n1tM_



26.5 35
PDB header:oxidoreductase
Chain: M: PDB Molecule:copc;
PDBTitle: crystal structure of complex between flavocytochrome c and copper2 chaperone copc from t. paradoxus
12d1wmxb_



23.9 44
Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:Family 30 carbohydrate binding module, CBM30 (PKD repeat)
13d1k0ha_



23.6 17
Fold:Phage tail proteins
Superfamily:Phage tail proteins
Family:gpFII-like
14c5az4A_



18.9 15
PDB header:motor protein
Chain: A: PDB Molecule:flagellar hook subunit protein;
PDBTitle: crystal structure of a 79kda fragment of flge, the hook protein from2 campylobacter jejuni
15d1dmla2



15.5 4
Fold:DNA clamp
Superfamily:DNA clamp
Family:DNA polymerase processivity factor
16c6e8aA_



15.0 22
PDB header:unknown function
Chain: A: PDB Molecule:duf1795 domain-containing protein;
PDBTitle: crystal structure of dcrb from salmonella enterica at 1.92 angstroms2 resolution
17c4r8aF_



14.2 31
PDB header:hydrolase/dna
Chain: F: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of pafan1 - 5' flap dna complex
18c2qp2A_



13.1 25
PDB header:unknown function
Chain: A: PDB Molecule:unknown protein;
PDBTitle: structure of a macpf/perforin-like protein
19c2pr1B_



12.9 50
PDB header:transferase
Chain: B: PDB Molecule:uncharacterized n-acetyltransferase ylbp;
PDBTitle: crystal structure of the bacillus subtilis n-acetyltransferase ylbp2 protein in complex with coenzyme-a
20c5h9xA_



12.8 29
PDB header:hydrolase
Chain: A: PDB Molecule:beta-1,3-glucanase;
PDBTitle: crystal structure of gh family 64 laminaripentaose-producing beta-1,3-2 glucanase from paenibacillus barengoltzii
21c3gqqD_



not modelled 12.0 20
PDB header:splicing
Chain: D: PDB Molecule:protein unc-119 homolog a;
PDBTitle: crystal structure of the human retinal protein 4 (unc-1192 homolog a). northeast structural genomics consortium3 target hr3066a
22c2kykA_



not modelled 10.7 26
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog;
PDBTitle: the sandwich region between two lmp2a py motif regulates the2 interaction between aip4ww2domain and py motif
23c4m8aA_



not modelled 10.0 29
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent zinc metalloprotease ftsh;
PDBTitle: crystal structure of thermotoga maritima ftsh periplasmic domain
24d1e88a3



not modelled 9.7 27
Fold:FnI-like domain
Superfamily:FnI-like domain
Family:Fibronectin type I module
25d1dmla1



not modelled 9.3 15
Fold:DNA clamp
Superfamily:DNA clamp
Family:DNA polymerase processivity factor
26c6eorD_



not modelled 8.4 14
PDB header:hydrolase
Chain: D: PDB Molecule:dipeptidyl peptidase 9;
PDBTitle: dpp9 - 1g244
27c1vw4V_



not modelled 8.4 19
PDB header:ribosome
Chain: V: PDB Molecule:54s ribosomal protein l36, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
28d1ywka1



not modelled 8.2 17
Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:KduI-like
29d3dtub1



not modelled 8.1 22
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Periplasmic domain of cytochrome c oxidase subunit II
30c4txvB_



not modelled 7.7 19
PDB header:protein binding
Chain: B: PDB Molecule:cytochrome c oxidase subunit 2;
PDBTitle: crystal structure of the mixed disulfide intermediate between2 thioredoxin-like tlpas(c110s) and subunit ii of cytochrome c oxidase3 coxbpd (c233s)
31c5u6fA_



not modelled 7.7 12
PDB header:cell adhesion
Chain: A: PDB Molecule:lpxtg-motif cell wall anchor domain protein;
PDBTitle: bacterial adhesin from mobiluncus mulieris containing intramolecular2 disulfide, isopeptide, and ester bond cross-links (space group p21)
32d1a6qa1



not modelled 7.4 25
Fold:Another 3-helical bundle
Superfamily:Protein serine/threonine phosphatase 2C, C-terminal domain
Family:Protein serine/threonine phosphatase 2C, C-terminal domain
33c4ribA_



not modelled 7.3 31
PDB header:hydrolase/dna
Chain: A: PDB Molecule:fanconi-associated nuclease 1;
PDBTitle: fan1 nuclease bound to 5' phosphorylated p(dt) single flap dna
34c4g6vE_



not modelled 7.2 19
PDB header:toxin
Chain: E: PDB Molecule:adhesin/hemolysin;
PDBTitle: cdia-ct/cdii toxin and immunity complex from burkholderia pseudomallei
35d1iwla_



not modelled 6.9 19
Fold:LolA-like prokaryotic lipoproteins and lipoprotein localization factors
Superfamily:Prokaryotic lipoproteins and lipoprotein localization factors
Family:Outer-membrane lipoproteins carrier protein LolA
36c2rttA_



not modelled 6.8 19
PDB header:hydrolase
Chain: A: PDB Molecule:chic;
PDBTitle: solution structure of the chitin-binding domain of chi18ac from2 streptomyces coelicolor
37d3ehbb1



not modelled 6.8 19
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Periplasmic domain of cytochrome c oxidase subunit II
38c1ymzA_



not modelled 6.4 36
PDB header:unknown function
Chain: A: PDB Molecule:cc45;
PDBTitle: cc45, an artificial ww domain designed using statistical2 coupling analysis
39d1pf4a1



not modelled 6.1 24
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
40c2kt8A_



not modelled 5.8 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:probable surface protein;
PDBTitle: solution nmr structure of the cpe1231(468-535) protein from2 clostridium perfringens, northeast structural genomics3 consortium target cpr82b
41d1w7ca3



not modelled 5.8 35
Fold:Cystatin-like
Superfamily:Amine oxidase N-terminal region
Family:Amine oxidase N-terminal region
42d2ie7a1



not modelled 5.8 53
Fold:Annexin
Superfamily:Annexin
Family:Annexin
43d1nmva1



not modelled 5.7 17
Fold:WW domain-like
Superfamily:WW domain
Family:WW domain
44d1exha_



not modelled 5.6 21
Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Carbohydrate-binding domain
Family:Cellulose-binding domain family II
45c6itcB_



not modelled 5.6 42
PDB header:protein transport
Chain: B: PDB Molecule:translocating peptide;
PDBTitle: structure of a substrate engaged seca-secy protein translocation2 machine
46c4je3A_



not modelled 5.5 43
PDB header:cell cycle
Chain: A: PDB Molecule:central kinetochore subunit iml3;
PDBTitle: an iml3-chl4 heterodimer links the core centromere to factors required2 for accurate chromosome segregation
47c4lqzA_



not modelled 5.4 46
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a duf4909 family protein (sav1798) from2 staphylococcus aureus subsp. aureus mu50 at 1.92 a resolution
48d1v54b1



not modelled 5.3 30
Fold:Cupredoxin-like
Superfamily:Cupredoxins
Family:Periplasmic domain of cytochrome c oxidase subunit II
49d1r2ja2



not modelled 5.2 21
Fold:Acyl-CoA dehydrogenase NM domain-like
Superfamily:Acyl-CoA dehydrogenase NM domain-like
Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite