Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1946c_(lppG)_2197515_2197967
DateMon Aug 5 13:25:04 BST 2019
Unique Job ID91bb0ab5100adf10
SequenceMIRGSAVSGL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:24.943 Y:27.761 Z:31.740
Model (left) based on template c5lqdB_
Top template information
PDB header:transferase
Chain: B: PDB Molecule:alpha,alpha-trehalose-phosphate synthase;
PDBTitle: trehalose-6-phosphate synthase, gdp-glucose-dependent otsa
Confidence and coverage
Confidence: 22.4% Coverage: 28%
42 residues ( 28% of your sequence) have been modelled with 22.4% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5lqdB_



22.4 26
PDB header:transferase
Chain: B: PDB Molecule:alpha,alpha-trehalose-phosphate synthase;
PDBTitle: trehalose-6-phosphate synthase, gdp-glucose-dependent otsa
2d1w79a1



13.5 30
Fold:beta-lactamase/transpeptidase-like
Superfamily:beta-lactamase/transpeptidase-like
Family:Dac-like
3c2lojA_



12.6 46
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative cytoplasmic protein;
PDBTitle: solution nmr structure of tstm1273 from salmonella typhimurium lt2,2 nesg target stt322, csgid target idp01027 and ocsp target tstm1273
4c2rhfA_



12.4 38
PDB header:hydrolase
Chain: A: PDB Molecule:dna helicase recq;
PDBTitle: d. radiodurans recq hrdc domain 3
5c3izcR_



11.2 31
PDB header:ribosome
Chain: R: PDB Molecule:60s ribosomal protein rpl18 (l18e);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
6c2jraB_



10.8 23
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein rpa2121;
PDBTitle: a novel domain-swapped solution nmr structure of protein rpa2121 from2 rhodopseudomonas palustris. northeast structural genomics target rpt6
7c2lmdA_



9.1 37
PDB header:transcription
Chain: A: PDB Molecule:prospero homeobox protein 1;
PDBTitle: minimal constraints solution nmr structure of prospero homeobox2 protein 1 from homo sapiens, northeast structural genomics consortium3 target hr4660b
8c3t5tA_



8.9 24
PDB header:transferase
Chain: A: PDB Molecule:putative glycosyltransferase;
PDBTitle: vall from streptomyces hygroscopicus in apo form
9c4wfwA_



8.0 32
PDB header:structural protein
Chain: A: PDB Molecule:general secretion pathway protein b;
PDBTitle: the crystal structure of dickeya dadantii gspb from the type 22 secretion system
10c5ow4A_



7.9 35
PDB header:membrane protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protease-resistant fragment of the trypanosoma2 cruzi gamete fusion protein hap2 ectodomain
11c4wkyB_



7.9 50
PDB header:transferase
Chain: B: PDB Molecule:beta-ketoacyl synthase;
PDBTitle: streptomcyes albus ja3453 oxazolomycin ketosynthase domain ozmn ks2
12d2hgaa1



7.8 21
Fold:PDZ domain-like
Superfamily:PDZ domain-like
Family:MTH1368 C-terminal domain-like
13c3ogiC_



7.5 47
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:putative esat-6-like protein 6;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 complex (rv2346c-rv2347c)
14c3zf7I_



7.3 28
PDB header:ribosome
Chain: I: PDB Molecule:60s ribosomal protein l18;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
15c2kt5B_



7.2 60
PDB header:rna binding protein / viral protein
Chain: B: PDB Molecule:icp27;
PDBTitle: rrm domain of mrna export adaptor ref2-i bound to hsv-1 icp27 peptide
16d2c4fl3



7.1 60
Fold:GLA-domain
Superfamily:GLA-domain
Family:GLA-domain
17d1danl3



6.9 60
Fold:GLA-domain
Superfamily:GLA-domain
Family:GLA-domain
18d1xr4a2



6.9 24
Fold:NagB/RpiA/CoA transferase-like
Superfamily:NagB/RpiA/CoA transferase-like
Family:CoA transferase alpha subunit-like
19c4gzrA_



6.8 47
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:esat-6-like protein 6;
PDBTitle: crystal structure of the mycobacterium tuberculosis h37rv esxop2 (rv2346c-rv2347c) complex in space group c2221
20c2qipA_



6.7 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function vpa0982;
PDBTitle: crystal structure of a protein of unknown function vpa0982 from vibrio2 parahaemolyticus rimd 2210633
21c2p5xB_



not modelled 6.7 27
PDB header:cell cycle
Chain: B: PDB Molecule:n-acetylserotonin o-methyltransferase-like protein;
PDBTitle: crystal structure of maf domain of human n-acetylserotonin o-2 methyltransferase-like protein
22c3j3bQ_



not modelled 6.6 20
PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l18;
PDBTitle: structure of the human 60s ribosomal proteins
23c4df1B_



not modelled 6.4 36
PDB header:lyase/lyase inhibitor
Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase;
PDBTitle: crystal structure of orotidine 5'-monophosphate decarboxylase from2 thermoproteus neutrophilus complexed with inhibitor bmp
24c5dxfA_



not modelled 6.3 35
PDB header:hydrolase
Chain: A: PDB Molecule:trehalose-6-phosphate phosphatase;
PDBTitle: structure of candida albicans trehalose-6-phosphate phosphatase n-2 terminal domain
25c4wwxY_



not modelled 6.2 67
PDB header:hydrolase, ligase
Chain: Y: PDB Molecule:v(d)j recombination-activating protein 2;
PDBTitle: crystal structure of the core rag1/2 recombinase
26d2fnea1



not modelled 6.1 28
Fold:PDZ domain-like
Superfamily:PDZ domain-like
Family:PDZ domain
27d2o3bb1



not modelled 6.1 50
Fold:Nuclease A inhibitor (NuiA)
Superfamily:Nuclease A inhibitor (NuiA)
Family:Nuclease A inhibitor (NuiA)
28d1mfga_



not modelled 5.7 28
Fold:PDZ domain-like
Superfamily:PDZ domain-like
Family:PDZ domain
29c3i18A_



not modelled 5.7 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lmo2051 protein;
PDBTitle: crystal structure of the pdz domain of the sdrc-like protein (lmo2051)2 from listeria monocytogenes, northeast structural genomics consortium3 target lmr166b
30c2nswA_



not modelled 5.7 42
PDB header:signaling protein
Chain: A: PDB Molecule:mating pheromone en-2;
PDBTitle: nmr solution structure of the pheromone en-2

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