Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1952_(-)_2200733_2200948
DateMon Aug 5 13:25:05 BST 2019
Unique Job ID7320c5fa0dea40b7
SequenceVIRNLPEGTK ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:23.113 Y:31.260 Z:33.426
Model (left) based on template c2h1oH_
Top template information
PDB header:gene regulation/dna complex
Chain: H: PDB Molecule:trafficking protein a;
PDBTitle: structure of fitab bound to ir36 dna fragment
Confidence and coverage
Confidence: 98.4% Coverage: 56%
40 residues ( 56% of your sequence) have been modelled with 98.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2h1oH_



98.4 43
PDB header:gene regulation/dna complex
Chain: H: PDB Molecule:trafficking protein a;
PDBTitle: structure of fitab bound to ir36 dna fragment
2d2bsqe1



98.2 43
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Trafficking protein A-like
3c4p5nB_



60.2 22
PDB header:structural genomics
Chain: B: PDB Molecule:hypothetical protein cnag_02591;
PDBTitle: structure of cnag_02591 from cryptococcus neoformans
4c3qoqC_



45.1 40
PDB header:transcription/dna
Chain: C: PDB Molecule:alginate and motility regulator z;
PDBTitle: crystal structure of the transcription factor amrz in complex with the2 18 base pair amrz1 binding site
5c4kl0A_



38.5 29
PDB header:calcium binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the effector protein xoo4466
6d1mnta_



16.9 19
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Arc/Mnt-like phage repressors
7c1u9pA_



15.2 20
PDB header:unknown function
Chain: A: PDB Molecule:parc;
PDBTitle: permuted single-chain arc

Binding site prediction 

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