Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1955_(-)_2201750_2202103
DateMon Aug 5 13:25:05 BST 2019
Unique Job ID79a1c2d35a68fb0e
SequenceMGTWKFFRAS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.396 Y:29.093 Z:33.264
Model (left) based on template c5ja9D_
Top template information
PDB header:toxin
Chain: D: PDB Molecule:toxin higb-2;
PDBTitle: crystal structure of the higb2 toxin in complex with nb6
Confidence and coverage
Confidence: 86.4% Coverage: 69%
81 residues ( 69% of your sequence) have been modelled with 86.4% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5ja9D_
86.4 19
PDB header:toxin
Chain: D: PDB Molecule:toxin higb-2;
PDBTitle: crystal structure of the higb2 toxin in complex with nb6
2d1wmia1
50.5 10
Fold:RelE-like
Superfamily:RelE-like
Family:RelE-like
3d1ykha1
44.1 44
Fold:Mediator hinge subcomplex-like
Superfamily:Mediator hinge subcomplex-like
Family:MED7 hinge region
4c4dfcC_
34.3 28
PDB header:hydrolase/dna binding protein
Chain: C: PDB Molecule:transcription-repair-coupling factor;
PDBTitle: core uvra/trcf complex
5c5u0pG_
32.0 44
PDB header:transcription
Chain: G: PDB Molecule:mediator complex subunit 7;
PDBTitle: cryo-em structure of the transcriptional mediator
6c5svaU_
30.8 44
PDB header:transcription, transferase/dna
Chain: U: PDB Molecule:mediator of rna polymerase ii transcription subunit 7;
PDBTitle: mediator-rna polymerase ii pre-initiation complex
7d1iccc_
30.6 23
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
8c3bpqD_
23.3 19
PDB header:toxin
Chain: D: PDB Molecule:toxin rele3;
PDBTitle: crystal structure of relb-rele antitoxin-toxin complex from2 methanococcus jannaschii
9d1euea_
21.5 29
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
10c5v6fA_
20.3 38
PDB header:sugar binding protein
Chain: A: PDB Molecule:hemolysin-related protein;
PDBTitle: crystal structure of the second beta-prism domain of rbmc from v.2 cholerae bound to mannotriose
11c3g5oC_
17.9 15
PDB header:toxin/antitoxin
Chain: C: PDB Molecule:uncharacterized protein rv2866;
PDBTitle: the crystal structure of the toxin-antitoxin complex relbe2 (rv2865-2 2866) from mycobacterium tuberculosis
12d1lj0a_
17.4 29
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
13d2b2na1
12.9 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
14c3o44G_
11.9 50
PDB header:toxin
Chain: G: PDB Molecule:hemolysin;
PDBTitle: crystal structure of the vibrio cholerae cytolysin (hlya) heptameric2 pore
15c3ue9A_
11.8 32
PDB header:ligase
Chain: A: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: crystal structure of adenylosuccinate synthetase (ampsase) (pura) from2 burkholderia thailandensis
16d2o3la1
11.1 14
Fold:Left-handed superhelix
Superfamily:BH3980-like
Family:BH3980-like
17c6bs7A_
10.4 27
PDB header:ligase
Chain: A: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: crystal structure of adenylosuccinate synthetase from legionella2 pneumophila philadelphia 1
18c4m0gB_
10.1 24
PDB header:ligase
Chain: B: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: the crystal structure of an adenylosuccinate synthetase from bacillus2 anthracis str. ames ancestor.
19c2ybfB_
9.9 56
PDB header:ligase
Chain: B: PDB Molecule:e3 ubiquitin-protein ligase rad18;
PDBTitle: complex of rad18 (rad6 binding domain) with rad6b
20c2kheA_
9.6 20
PDB header:hydrolase
Chain: A: PDB Molecule:toxin-like protein;
PDBTitle: solution structure of the bacterial toxin rele from thermus2 thermophilus hb8
21c3f8tA_
not modelled 8.8 26
PDB header:hydrolase
Chain: A: PDB Molecule:predicted atpase involved in replication control, cdc46/mcm
PDBTitle: crystal structure analysis of a full-length mcm homolog from2 methanopyrus kandleri
22d1qf5a_
not modelled 8.8 22
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
23c4rt0B_
not modelled 8.6 43
PDB header:protein binding
Chain: B: PDB Molecule:alginate biosynthesis protein alg44;
PDBTitle: structure of the alg44 pilz domain from pseudomonas aeruginosa pao1 in2 complex with c-di-gmp
24c3hjhA_
not modelled 8.6 28
PDB header:hydrolase
Chain: A: PDB Molecule:transcription-repair-coupling factor;
PDBTitle: a rigid n-terminal clamp restrains the motor domains of the bacterial2 transcription-repair coupling factor
25d1pbya5
not modelled 8.5 23
Fold:Streptavidin-like
Superfamily:Quinohemoprotein amine dehydrogenase A chain, domain 3
Family:Quinohemoprotein amine dehydrogenase A chain, domain 3
26c2mdtA_
not modelled 8.5 53
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: a pilt n-terminus domain protein sso1118 from hyperthemophilic2 archaeon sulfolobus solfataricus p2
27c3fpnB_
not modelled 8.4 23
PDB header:dna binding protein
Chain: B: PDB Molecule:geobacillus stearothermophilus uvrb interaction domain;
PDBTitle: crystal structure of uvra-uvrb interaction domains
28d2eyqa4
not modelled 8.4 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
29d1dj2a_
not modelled 8.3 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
30c5nwvA_
not modelled 8.3 55
PDB header:viral protein
Chain: A: PDB Molecule:scrfp-tag,gp41;
PDBTitle: nmr assignment and structure of a peptide derived from the fusion2 peptide of hiv-1 gp41 in the presence of dodecylphosphocholine3 micelles
31c2d7uA_
not modelled 8.2 22
PDB header:ligase
Chain: A: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: crystal structure of hypothetical adenylosuccinate synthetase, ph04382 from pyrococcus horikoshii ot3
32c4z8vA_
not modelled 7.8 31
PDB header:protein binding
Chain: A: PDB Molecule:avrrxo1-orf1;
PDBTitle: crystal structure of avrrxo1-orf1:-orf2 complex, native.
33c2wewA_
not modelled 7.7 26
PDB header:lipid transport
Chain: A: PDB Molecule:apolipoprotein m;
PDBTitle: crystal structure of human apom in complex with myristic2 acid
34c1iweB_
not modelled 7.3 15
PDB header:ligase
Chain: B: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: imp complex of the recombinant mouse-muscle adenylosuccinate2 synthetase
35d1iwea_
not modelled 7.2 15
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
36d1axxa_
not modelled 7.0 26
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
37c4qcoU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing acylated trna-3 substrates in the a and p sites. this entry contains the 30s subunit4 of the second 70s ribosome in the asu.
38c4qcwU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing short substrate-3 mimic cytidine-puromycin in the a site and acylated trna in the p4 site. this entry contains the 30s subunit of the second 70s ribosome5 in the asu.
39c4nw0U_
not modelled 6.8 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of antibiotic ge82832 bound to 70s ribosome
40c4qcqU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the2 post-catalysis state of peptide bond formation containing dipeptydil-3 trna in the a site and deacylated trna in the p site. this entry4 contains the 50s subunit of the first 70s ribosome in the asu.
41c3uxtU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: the structure of thermorubin in complex with the 70s ribosome from2 thermus thermophilus. this file contains the 30s subunit of one 70s3 ribosome. the entire crystal structure contains two 70s ribosomes.'
42c4rb7U_
not modelled 6.8 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with amicoumacin, mrna and three deacylated trnas in the a, p and e3 sites
43c4qcuU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing short substrate-3 mimic cytidine-puromycin in the a site and acylated trna in the p4 site. this entry contains the 30s subunit of the first 70s ribosome5 in the asu.
44c4nvwU_
not modelled 6.8 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of antibiotic dityromycin bound to 70s ribosome
45c4dhbU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of yaej bound to the 70s ribosome
46c4rb5U_
not modelled 6.8 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with amicoumacin, mrna and three deacylated trnas in the a, p and e3 sites
47c4nvuU_
not modelled 6.8 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of antibiotic dityromycin bound to 70s ribosome
48c4qcmU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing acylated trna-3 substrates in the a and p sites. this entry contains the 30s subunit4 of the first 70s ribosome in the asu.
49c4nvyU_
not modelled 6.8 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of antibiotic ge82832 bound to 70s ribosome
50c4qcyU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing short substrate-3 mimic cytidine-cytidine-puromycin in the a site and acylated trna in4 the p site. this entry contains the 30s subunit of the first 70s5 ribosome in the asu.
51c3v2cU_
not modelled 6.8 43
PDB header:ribosome/inhibitor
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of yfia bound to the 70s ribosome. this pdb entry2 contains coordinates for the 30s subunit with bound yfia of the 1st3 ribosome in the asu
52c4qcsU_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the2 post-catalysis state of peptide bond formation containing dipeptydil-3 trna in the a site and deacylated trna in the p site. this entry4 contains the 30s subunit of the second 70s ribosome in the asu.
53c4qd0U_
not modelled 6.8 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in the pre-2 attack state of peptide bond formation containing short substrate-3 mimic cytidine-cytidine-puromycin in the a site and acylated trna in4 the p site. this entry contains the 30s subunit of the second 70s5 ribosome in the asu.
54c4rb9U_
not modelled 6.7 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with pactamycin (soaked), mrna and three deacylated trnas in the a, p3 and e sites
55c4rbdU_
not modelled 6.7 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with pactamycin (co-crystallized), mrna and deacylated trna in the p3 site
56c4qjtu_
not modelled 6.7 43
PDB header:ribosome
Chain: U: PDB Molecule:
PDBTitle: crystal structure of elongation factor 4 (ef4/lepa) bound to the2 thermus thermophilus 70s ribosome, 30s subunit of the 70s ribosome
57c4rbjU_
not modelled 6.7 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with negamycin, mrna and three deacylated trnas in the a, p and e3 sites
58c4rbhU_
not modelled 6.7 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with negamycin, mrna and three deacylated trnas in the a, p and e3 sites
59c4rbbU_
not modelled 6.7 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 70s ribosome in complex2 with pactamycin (soaked), mrna and three deacylated trnas in the a, p3 and e sites
60c4k0pU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of thermus thermophilus 70s containing trnas and2 mrna stop codon with pseudouridine
61c4lfcU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
62c3d5cU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 30s subunit, release factor 1 (rf1), two trna, and3 mrna molecules of the second 70s ribosome. the entire crystal4 structure contains two 70s ribosomes as described in remark 400.
63c4l6mU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of blasticidin s bound to thermus thermophilus 70s2 ribosome. this file contains the 30s subunit, trna and mrna molecules3 from the second 70s ribosome.
64c4l6kU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of blasticidin s bound to thermus thermophilus 70s2 ribosome. this file contains the 30s subunit, trna and mrna molecules3 from the first 70s ribosome.
65c1i96U_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 30s ribosomal subunit from thermus2 thermophilus in complex with the translation initiation3 factor if3 (c-terminal domain)
66c4k0lU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of thermus thermophilus 70s in complex with trnas2 and mrna containing a pseudouridine in a stop codon
67c1n33V_
not modelled 6.6 43
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit2 bound to codon and near-cognate transfer rna anticodon3 stem-loop mismatched at the second codon position at the a4 site with paromomycin
68c2e5lV_
not modelled 6.6 43
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: a snapshot of the 30s ribosomal subunit capturing mrna via2 the shine- dalgarno interaction
69c4kfhU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 70s ribosome bound with the q253p mutant of2 release factor rf2. 30s of the a subunit
70c6mknV_
not modelled 6.6 43
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of the thermus thermophilus 30s ribosomal subunit complexed2 with an inosine (i34) modified anticodon stem loop (asl) of3 escherichia coli transfer rna arginine 2 (trnaarg2) bound to an mrna4 with an cgu-codon in the a-site and paromomycin
71c4k0kU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus 30s ribosomal subunit2 complexed with a serine-asl and mrna containing a stop codon
72c4kfkU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 70s ribosome bound with the q253p mutant of2 release factor rf2. 30s of the b subunit
73c3pyuU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:domain 3 of crpv igr ires rna;
PDBTitle: crystal structure of a complex containing domain 3 of crpv igr ires2 rna bound to the 70s ribosome. this file contains the 30s subunit of3 the second 70s ribosome.
74c3pysU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:domain 3 of crpv igr ires rna;
PDBTitle: crystal structure of a complex containing domain 3 of crpv igr ires2 rna bound to the 70s ribosome. this file contains the 30s subunit of3 the first 70s ribosome.
75c5lmrV_
not modelled 6.6 43
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of bacterial 30s-if1-if3-mrna-trna translation pre-2 initiation complex(state-2b)
76c4ji0U_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
77c5lmuV_
not modelled 6.6 43
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of bacterial 30s-if3-mrna-trna translation pre-initiation2 complex, closed form (state-4)
78c5iwaV_
not modelled 6.6 43
PDB header:translation
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the 30s ribosomal subunit from thermus2 thermophilus in complex with the ge81112 peptide antibiotic
79c4x64U_
not modelled 6.6 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
80c5br8U_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: ambient-temperature crystal structure of 30s ribosomal subunit from2 thermus thermophilus in complex with paromomycin
81c3pynU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of a complex containing domain 3 from the psiv igr2 ires rna bound to the 70s ribosome. this file contains the 30s3 subunit of the first 70s ribosome.
82c5lmsV_
not modelled 6.6 43
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of bacterial 30s-if1-if3-mrna-trna translation pre-2 initiation complex(state-2c)
83c2y16U_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: the crystal structure of ef-tu and g24a-trna-trp bound to a2 cognate codon on the 70s ribosome.
84c5lmpV_
not modelled 6.6 43
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of bacterial 30s-if1-if3-mrna translation pre-initiation2 complex (state-1c)
85c4dr7U_
not modelled 6.6 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus (hb8) 30s ribosomal2 subunit with codon, crystallographically disordered near-cognate3 transfer rna anticodon stem-loop mismatched at the second codon4 position, and streptomycin bound
86c5wnrU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
87c5wnsU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
88c3kisu_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:
PDBTitle: structure of rele nuclease bound to the 70s ribosome (precleavage2 state; part 3 of 4)
89c4dr4U_
not modelled 6.6 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of the thermus thermophilus (hb8) 30s ribosomal2 subunit with codon, cognate transfer rna anticodon stem-loop and3 multiple copies of paromomycin molecules bound
90c2wrnU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: the crystal structure of the 70s ribosome bound to ef-tu2 and trna (part 1 of 4).
91c2wrqU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: the crystal structure of the 70s ribosome bound to ef-tu2 and trna (part 3 of 4).
92c3kiqu_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:
PDBTitle: structure of rele nuclease bound to the 70s ribosome (precleavage2 state; part 1 of 4)
93c3knlU_
not modelled 6.6 43
PDB header:ribosome/antibiotic
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: the structures of capreomycin bound to the 70s ribosome. this file2 contains the 30s subunit for molecule i
94c5lmvV_
not modelled 6.6 43
PDB header:ribosome
Chain: V: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structure of bacterial 30s-if1-if2-if3-mrna-trna translation pre-2 initiation complex(state-iii)
95c5wnqU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of 30s ribosomal subunit from thermus thermophilus
96c3d5aU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 30s subunit, release factor 1 (rf1), two trna, and3 mrna molecules of one 70s ribosome. the entire crystal structure4 contains two 70s ribosomes as described in remark 400.
97c3pyqU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: crystal structure of a complex containing domain 3 from the psiv igr2 ires rna bound to the 70s ribosome. this file contains the 30s3 subunit of the second 70s ribosome.
98c4kvbU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: thermus thermophilus hb27 30s ribosomal subunit lacking ribosomal2 protein s17
99c6casU_
not modelled 6.6 43
PDB header:ribosome
Chain: U: PDB Molecule:30s ribosomal protein thx;
PDBTitle: serial femtosecond x-ray crystal structure of 30s ribosomal subunit2 from thermus thermophilus in complex with n1ms

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite