Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1957_(-)_2202591_2203136
DateMon Aug 5 13:25:05 BST 2019
Unique Job ID7e45cd7fe25d0869
SequenceMTDRTDADDL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:32.344 Y:65.414 Z:34.695
Model (left) based on template c5mtwD_
Top template information
PDB header:chaperone
Chain: D: PDB Molecule:secb-like chaperone rv1957;
PDBTitle: mycobacterium tuberculosis rv1957 secb-like chaperone in complex with2 a chad peptide from rv1956 higa1 antitoxin
Confidence and coverage
Confidence:100.0% Coverage: 75%
136 residues ( 75% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5mtwD_



100.0 100
PDB header:chaperone
Chain: D: PDB Molecule:secb-like chaperone rv1957;
PDBTitle: mycobacterium tuberculosis rv1957 secb-like chaperone in complex with2 a chad peptide from rv1956 higa1 antitoxin
2d1ozba_



90.7 28
Fold:SecB-like
Superfamily:SecB-like
Family:Bacterial protein-export protein SecB
3d1ozbg_



90.5 28
Fold:SecB-like
Superfamily:SecB-like
Family:Bacterial protein-export protein SecB
4d1qyna_



90.4 23
Fold:SecB-like
Superfamily:SecB-like
Family:Bacterial protein-export protein SecB
5c4o7kA_



24.3 31
PDB header:antitumor protein
Chain: A: PDB Molecule:protein osa;
PDBTitle: crystal structure of oncogenic suppression activity protein - a2 plasmid fertility inhibition factor
6c1jqsB_



17.9 54
PDB header:ribosome
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: fitting of l11 protein and elongation factor g (domain g'2 and v) in the cryo-em map of e. coli 70s ribosome bound3 with ef-g and gmppcp, a nonhydrolysable gtp analog
7c6eu9C_



17.7 32
PDB header:transcription
Chain: C: PDB Molecule:retinoic acid receptor;
PDBTitle: crystal structure of platynereis dumerilii rar ligand-binding domain2 in complex with all-trans retinoic acid
8c5a79A_



14.1 26
PDB header:virus
Chain: A: PDB Molecule:capsid protein;
PDBTitle: novel inter-subunit contacts in barley stripe mosaic virus revealed by2 cryo-em
9d1wiea_



12.7 27
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
10c6bxwA_



11.2 28
PDB header:membrane protein
Chain: A: PDB Molecule:mitochondrial association factor 1;
PDBTitle: crystal structure of toxoplasma gondii mitochondrial association2 factor 1 b (maf1b) in complex with adpribose
11c3dd7D_



10.9 78
PDB header:ribosome inhibitor
Chain: D: PDB Molecule:prevent host death protein;
PDBTitle: structure of doch66y in complex with the c-terminal domain of phd
12d1ou0a_



10.2 43
Fold:Flavodoxin-like
Superfamily:Precorrin-8X methylmutase CbiC/CobH
Family:Precorrin-8X methylmutase CbiC/CobH
13d1f2va_



10.0 21
Fold:Flavodoxin-like
Superfamily:Precorrin-8X methylmutase CbiC/CobH
Family:Precorrin-8X methylmutase CbiC/CobH
14c2afvB_



9.4 43
PDB header:isomerase
Chain: B: PDB Molecule:cobalamin biosynthesis precorrin isomerase;
PDBTitle: the crystal structure of putative precorrin isomerase cbic2 in cobalamin biosynthesis
15c4au1A_



9.0 7
PDB header:isomerase
Chain: A: PDB Molecule:precorrin-8x methylmutase;
PDBTitle: crystal structure of cobh (precorrin-8x methyl mutase)2 complexed with c5 desmethyl-hba
16c3e7dC_



8.9 14
PDB header:isomerase
Chain: C: PDB Molecule:cobh, precorrin-8x methylmutase;
PDBTitle: crystal structure of precorrin-8x methyl mutase cbic/cobh from2 brucella melitensis
17d1v9ca_



8.8 57
Fold:Flavodoxin-like
Superfamily:Precorrin-8X methylmutase CbiC/CobH
Family:Precorrin-8X methylmutase CbiC/CobH
18c3qrzC_



8.2 55
PDB header:hormone receptor
Chain: C: PDB Molecule:abscisic acid receptor pyl5;
PDBTitle: crystal structure of native abscisic acid receptor pyl5 at 2.62 angstrom
19c5n9jC_



7.9 29
PDB header:transcription
Chain: C: PDB Molecule:mediator of rna polymerase ii transcription subunit 19;
PDBTitle: core mediator of transcriptional regulation
20d1wb1a3



7.8 73
Fold:Elongation factor/aminomethyltransferase common domain
Superfamily:EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Family:EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
21d2veaa3



not modelled 7.5 50
Fold:Profilin-like
Superfamily:PYP-like sensor domain (PAS domain)
Family:BphP N-terminal domain-like
22d1neka3



not modelled 7.3 24
Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
23c3dd7B_



not modelled 7.1 86
PDB header:ribosome inhibitor
Chain: B: PDB Molecule:prevent host death protein;
PDBTitle: structure of doch66y in complex with the c-terminal domain of phd
24c5ldwC_



not modelled 7.0 46
PDB header:oxidoreductase
Chain: C: PDB Molecule:nadh dehydrogenase [ubiquinone] iron-sulfur protein 3,
PDBTitle: structure of mammalian respiratory complex i, class1
25d2bs2a3



not modelled 6.9 15
Fold:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Superfamily:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Family:Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
26c2x2iB_



not modelled 6.2 34
PDB header:lyase
Chain: B: PDB Molecule:alpha-1,4-glucan lyase isozyme 1;
PDBTitle: crystal structure of the gracilariopsis lemaneiformis alpha-1,4-2 glucan lyase with acarbose
27c2phgB_



not modelled 6.1 67
PDB header:transcription
Chain: B: PDB Molecule:alpha trans-inducing protein;
PDBTitle: model for vp16 binding to tfiib
28c2l4wA_



not modelled 5.6 54
PDB header:protein transport
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of the xanthomonas virb7
29d1xn8a_



not modelled 5.5 19
Fold:Hypothetical protein YqbG
Superfamily:Hypothetical protein YqbG
Family:Hypothetical protein YqbG
30c6ijoG_



not modelled 5.4 39
PDB header:photosynthesis
Chain: G: PDB Molecule:psag;
PDBTitle: photosystem i of chlamydomonas reinhardtii
31c2n0pA_



not modelled 5.2 38
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein aq_1974;
PDBTitle: solution structure of aquifex aeolicus aq1974
32c1x0gA_



not modelled 5.2 22
PDB header:metal binding protein
Chain: A: PDB Molecule:isca;
PDBTitle: crystal structure of isca with the [2fe-2s] cluster

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