Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1965_(yrbE3B)_2208515_2209330
DateMon Aug 5 13:25:06 BST 2019
Unique Job ID42bb5043060defe9
SequenceMTAAKALVSE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.148 Y:45.792 Z:72.009
Model (left) based on template c6ic4H_
Top template information
PDB header:protein transport
Chain: H: PDB Molecule:abc transporter permease;
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
Confidence and coverage
Confidence:100.0% Coverage: 92%
249 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6ic4H_
100.0 20
PDB header:protein transport
Chain: H: PDB Molecule:abc transporter permease;
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
2c5x5yG_
86.1 16
PDB header:membrane protein
Chain: G: PDB Molecule:uncharacterized protein;
PDBTitle: a membrane protein complex
3c5l75F_
66.0 14
PDB header:transport protein
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: a protein structure
4c6mjpG_
63.2 16
PDB header:lipid transport
Chain: G: PDB Molecule:lps export abc transporter permease lptg;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
5c5l75G_
47.9 15
PDB header:transport protein
Chain: G: PDB Molecule:fig000906: predicted permease;
PDBTitle: a protein structure
6c5x5yF_
35.4 19
PDB header:membrane protein
Chain: F: PDB Molecule:uncharacterized protein;
PDBTitle: a membrane protein complex
7c6qvcB_
30.4 12
PDB header:membrane protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: cryoem structure of the human clc-1 chloride channel, cbs state 1
8c5xu1M_
26.2 12
PDB header:transport protein
Chain: M: PDB Molecule:abc transporter permeae;
PDBTitle: structure of a non-canonical abc transporter from streptococcus2 pneumoniae r6
9c6mjpF_
24.9 14
PDB header:lipid transport
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
10c5ghaF_
21.9 30
PDB header:transferase/transport protein
Chain: F: PDB Molecule:sulfur carrier ttub;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
11d2hafa1
20.7 30
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
12c2hg5D_
19.4 33
PDB header:membrane protein
Chain: D: PDB Molecule:kcsa channel;
PDBTitle: cs+ complex of a k channel with an amide to ester substitution in the2 selectivity filter
13c2m67A_
18.7 6
PDB header:transport protein
Chain: A: PDB Molecule:merf;
PDBTitle: full-length mercury transporter protein merf in lipid bilayer2 membranes
14c2yvxD_
16.9 9
PDB header:transport protein
Chain: D: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte
15c2hv8D_
16.6 16
PDB header:protein transport
Chain: D: PDB Molecule:rab11 family-interacting protein 3;
PDBTitle: crystal structure of gtp-bound rab11 in complex with fip3
16c2aj2A_
16.0 30
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical upf0301 protein vc0467;
PDBTitle: x-ray crystal structure of protein vc0467 from vibrio2 cholerae. northeast structural genomics consortium target3 vcr8.
17c4migC_
14.5 19
PDB header:oxidoreductase
Chain: C: PDB Molecule:pyranose 2-oxidase;
PDBTitle: pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild2 type
18c5sv0C_
14.0 22
PDB header:transport protein
Chain: C: PDB Molecule:biopolymer transport protein exbb;
PDBTitle: structure of the exbb/exbd complex from e. coli at ph 7.0
19c6coyB_
13.4 13
PDB header:transport protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: human clc-1 chloride ion channel, transmembrane domain
20c1abzA_
12.4 44
PDB header:de novo design
Chain: A: PDB Molecule:alpha-t-alpha;
PDBTitle: alpha-t-alpha, a de novo designed peptide, nmr, 232 structures
21c6bs7A_
not modelled 12.0 41
PDB header:ligase
Chain: A: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: crystal structure of adenylosuccinate synthetase from legionella2 pneumophila philadelphia 1
22c3dfmA_
not modelled 11.8 23
PDB header:hydrolase
Chain: A: PDB Molecule:teicoplanin pseudoaglycone deacetylase orf2;
PDBTitle: the crystal structure of the zinc inhibited form of2 teicoplanin deacetylase orf2
23c3nd0A_
not modelled 11.8 16
PDB header:transport protein
Chain: A: PDB Molecule:sll0855 protein;
PDBTitle: x-ray crystal structure of a slow cyanobacterial cl-/h+ antiporter
24d1z96a1
not modelled 10.9 24
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
25c1cf3A_
not modelled 10.7 21
PDB header:oxidoreductase(flavoprotein)
Chain: A: PDB Molecule:protein (glucose oxidase);
PDBTitle: glucose oxidase from apergillus niger
26c3vvpA_
not modelled 9.8 9
PDB header:transport protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of mate in complex with br-nrf
27d1q74a_
not modelled 9.6 40
Fold:LmbE-like
Superfamily:LmbE-like
Family:LmbE-like
28d1g7oa1
not modelled 9.5 12
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
29d2ieaa3
not modelled 9.3 14
Fold:TK C-terminal domain-like
Superfamily:TK C-terminal domain-like
Family:Transketolase C-terminal domain-like
30d2k0bx1
not modelled 8.9 20
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:UBA domain
31c1gw4A_
not modelled 8.5 36
PDB header:high density lipoproteins
Chain: A: PDB Molecule:apoa-i;
PDBTitle: the helix-hinge-helix structural motif in human2 apolipoprotein a-i determined by nmr spectroscopy, 13 structure
32d1i94m_
not modelled 8.4 25
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Ribosomal protein S13
33c6oitG_
not modelled 8.1 7
PDB header:plant protein
Chain: G: PDB Molecule:protein chromatin remodeling 35;
PDBTitle: cryoem structure of arabidopsis ddr' complex (drd1 peptide-dms3-rdm1)
34d2hjqa1
not modelled 8.0 16
Fold:LEM/SAP HeH motif
Superfamily:Rho N-terminal domain-like
Family:YqbF C-terminal domain-like
35d2do8a1
not modelled 8.0 40
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
36c2m7xA_
not modelled 7.8 7
PDB header:membrane protein
Chain: A: PDB Molecule:na(+)/h(+) antiporter;
PDBTitle: structural and functional analysis of transmembrane segment iv of the2 salt tolerance protein sod2
37c1zaxU_
not modelled 7.6 32
PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
38c1zaxV_
not modelled 7.6 32
PDB header:structural protein
Chain: V: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
39c1zaxW_
not modelled 7.6 32
PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
40c1zavU_
not modelled 7.6 32
PDB header:structural protein
Chain: U: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
41d1zavu1
not modelled 7.6 32
Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain
42c1zavV_
not modelled 7.6 32
PDB header:structural protein
Chain: V: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
43c1zavW_
not modelled 7.6 32
PDB header:structural protein
Chain: W: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
44c1zavY_
not modelled 7.6 32
PDB header:structural protein
Chain: Y: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
45c1zaxY_
not modelled 7.6 32
PDB header:structural protein
Chain: Y: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
46c1zavX_
not modelled 7.6 32
PDB header:structural protein
Chain: X: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p21
47c1zaxX_
not modelled 7.6 32
PDB header:structural protein
Chain: X: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: ribosomal protein l10-l12(ntd) complex, space group p212121,2 form b
48c1vmaA_
not modelled 7.5 25
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: crystal structure of cell division protein ftsy (tm0570) from2 thermotoga maritima at 1.60 a resolution
49c1dd3C_
not modelled 7.4 32
PDB header:ribosome
Chain: C: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima
50c1dd3D_
not modelled 7.4 32
PDB header:ribosome
Chain: D: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima
51c1q7tA_
not modelled 7.3 40
PDB header:hydrolase
Chain: A: PDB Molecule:hypothetical protein rv1170;
PDBTitle: rv1170 (mshb) from mycobacterium tuberculosis
52c2mfrA_
not modelled 7.2 12
PDB header:transferase
Chain: A: PDB Molecule:insulin receptor;
PDBTitle: solution structure of the transmembrane domain of the insulin receptor2 in micelles
53c5ehbA_
not modelled 7.2 45
PDB header:de novo protein
Chain: A: PDB Molecule:phiosyi;
PDBTitle: a de novo designed hexameric coiled-coil peptide with iodotyrosine
54c2jy8A_
not modelled 7.2 20
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin-binding protein p62;
PDBTitle: nmr structure of the ubiquitin associated (uba) domain of2 p62 (sqstm1) in complex with ubiquitin. rdc refined
55c6cfwE_
not modelled 7.1 19
PDB header:membrane protein
Chain: E: PDB Molecule:mbh subunit;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
56c5l3sF_
not modelled 7.0 42
PDB header:protein transport
Chain: F: PDB Molecule:signal recognition particle receptor ftsy;
PDBTitle: structure of the gtpase heterodimer of crenarchaeal srp54 and ftsy
57c5i34B_
not modelled 7.0 35
PDB header:ligase
Chain: B: PDB Molecule:adenylosuccinate synthetase;
PDBTitle: adenylosuccinate synthetase from cryptococcus neoformans complexed2 with gdp and imp
58c4w86B_
not modelled 6.9 22
PDB header:hydrolase
Chain: B: PDB Molecule:xyloglucan-specific endo-beta-1,4-glucanase;
PDBTitle: crystal structure of xeg5a, a gh5 xyloglucan-specific endo-beta-1,4-2 glucanase from ruminal metagenomic library, in complex with glucose3 and tris
59c4ak9A_
not modelled 6.9 25
PDB header:protein transport
Chain: A: PDB Molecule:cpftsy;
PDBTitle: structure of chloroplast ftsy from physcomitrella patens
60c3tgvD_
not modelled 6.8 40
PDB header:heme binding protein
Chain: D: PDB Molecule:heme-binding protein hutz;
PDBTitle: crystal structure of hutz,the heme storsge protein from vibrio2 cholerae
61c2j7pA_
not modelled 6.7 33
PDB header:signal recognition
Chain: A: PDB Molecule:signal recognition particle protein;
PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy
62c3dfiA_
not modelled 6.6 33
PDB header:hydrolase
Chain: A: PDB Molecule:pseudoaglycone deacetylase dbv21;
PDBTitle: the crystal structure of antimicrobial reagent a40926 pseudoaglycone2 deacetylase dbv21
63c6cy1B_
not modelled 6.5 33
PDB header:signaling protein
Chain: B: PDB Molecule:signal recognition particle receptor ftsy;
PDBTitle: crystal structure of signal recognition particle receptor ftsy from2 elizabethkingia anophelis
64c2kitA_
not modelled 6.5 15
PDB header:transferase
Chain: A: PDB Molecule:serine/threonine-protein kinase tor1;
PDBTitle: the solution structure of the reduced yeast tor1 fatc domain bound to2 dpc micelles at 298k
65c1w1nA_
not modelled 6.5 15
PDB header:transferase
Chain: A: PDB Molecule:phosphatidylinositol 3-kinase tor1;
PDBTitle: the solution structure of the fatc domain of the protein kinase tor12 from yeast
66c2lxeA_
not modelled 6.5 7
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase suvr4;
PDBTitle: s4wyild
67c5azcA_
not modelled 6.4 17
PDB header:transferase
Chain: A: PDB Molecule:prolipoprotein diacylglyceryl transferase;
PDBTitle: crystal structure of escherichia coli lgt in complex with2 phosphatidylglycerol
68c3n4qA_
not modelled 6.4 30
PDB header:dna binding protein
Chain: A: PDB Molecule:terminase subunit ul89 protein;
PDBTitle: human cytomegalovirus terminase nuclease domain, mn soaked
69c5fiyE_
not modelled 6.4 50
PDB header:apoptosis
Chain: E: PDB Molecule:prkc apoptosis wt1 regulator protein;
PDBTitle: crystal structure of coiled coil domain of pawr
70c5d3aA_
not modelled 6.3 44
PDB header:motor protein
Chain: A: PDB Molecule:kinesin-like protein kif21a;
PDBTitle: kif21a regulatory coiled coil
71c3b9qA_
not modelled 6.2 25
PDB header:protein transport
Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit
PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana
72c5ehbB_
not modelled 6.2 45
PDB header:de novo protein
Chain: B: PDB Molecule:phiosyi;
PDBTitle: a de novo designed hexameric coiled-coil peptide with iodotyrosine
73c5egiB_
not modelled 6.2 9
PDB header:membrane protein
Chain: B: PDB Molecule:uncharacterized protein y57a10a.10;
PDBTitle: structure of a trimeric intracellular cation channel from c. elegans2 with bound ca2+
74c5eikA_
not modelled 6.1 11
PDB header:membrane protein
Chain: A: PDB Molecule:uncharacterized protein y57a10a.28;
PDBTitle: structure of a trimeric intracellular cation channel from c. elegans2 in the absence of ca2+
75c5l1xH_
not modelled 6.1 37
PDB header:viral protein
Chain: H: PDB Molecule:hmpv f1 subunit;
PDBTitle: structure of the human metapneumovirus fusion protein in the2 postfusion conformation
76c5nikK_
not modelled 6.0 17
PDB header:transport protein
Chain: K: PDB Molecule:macrolide export atp-binding/permease protein macb;
PDBTitle: structure of the macab-tolc abc-type tripartite multidrug efflux pump
77c5ch4E_
not modelled 6.0 7
PDB header:protein transport
Chain: E: PDB Molecule:protein translocase subunit sece;
PDBTitle: peptide-bound state of thermus thermophilus secyeg
78c5uyoA_
not modelled 6.0 45
PDB header:de novo protein
Chain: A: PDB Molecule:heeh_rd4_0097;
PDBTitle: solution nmr structure of the de novo mini protein heeh_rd4_0097
79d2ebfx2
not modelled 6.0 29
Fold:EreA/ChaN-like
Superfamily:EreA/ChaN-like
Family:PMT domain-like
80c3n4pA_
not modelled 5.9 30
PDB header:dna binding protein
Chain: A: PDB Molecule:terminase subunit ul89 protein;
PDBTitle: human cytomegalovirus terminase nuclease domain
81c2of5A_
not modelled 5.8 12
PDB header:apoptosis
Chain: A: PDB Molecule:death domain-containing protein cradd;
PDBTitle: oligomeric death domain complex
82c2yhsA_
not modelled 5.8 33
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: structure of the e. coli srp receptor ftsy
83d2r6gf2
not modelled 5.8 4
Fold:MetI-like
Superfamily:MetI-like
Family:MetI-like
84c2q9cA_
not modelled 5.7 42
PDB header:signaling protein
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: structure of ftsy:gmppnp with mgcl complex
85d1zkea1
not modelled 5.7 50
Fold:ROP-like
Superfamily:HP1531-like
Family:HP1531-like
86c2og2A_
not modelled 5.7 25
PDB header:protein transport
Chain: A: PDB Molecule:putative signal recognition particle receptor;
PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana
87c2qy9A_
not modelled 5.7 33
PDB header:protein transport
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
88c4dagA_
not modelled 5.7 37
PDB header:viral protein/immune system
Chain: A: PDB Molecule:fusion glycoprotein f0;
PDBTitle: structure of the human metapneumovirus fusion protein with2 neutralizing antibody identifies a pneumovirus antigenic site
89c4hubG_
not modelled 5.6 24
PDB header:ribosome
Chain: G: PDB Molecule:50s ribosomal protein l10e;
PDBTitle: the re-refined crystal structure of the haloarcula marismortui large2 ribosomal subunit at 2.4 angstrom resolution: more complete structure3 of the l7/l12 and l1 stalk, l5 and lx proteins
90c2mgyA_
not modelled 5.6 12
PDB header:membrane protein
Chain: A: PDB Molecule:translocator protein;
PDBTitle: solution structure of the mitochondrial translocator protein (tspo) in2 complex with its high-affinity ligand pk11195
91c3ra3E_
not modelled 5.6 86
PDB header:de novo protein
Chain: E: PDB Molecule:p1c;
PDBTitle: crystal structure of a section of a de novo design gigadalton protein2 fibre
92c3dmdA_
not modelled 5.6 33
PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle receptor;
PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
93c2cnwF_
not modelled 5.5 42
PDB header:signal recognition
Chain: F: PDB Molecule:cell division protein ftsy;
PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy
94c5il0B_
not modelled 5.5 36
PDB header:rna binding protein
Chain: B: PDB Molecule:mettl14;
PDBTitle: crystal structural of the mettl3-mettl14 complex for n6-adenosine2 methylation
95c5wb0F_
not modelled 5.5 37
PDB header:viral protein
Chain: F: PDB Molecule:fusion glycoprotein f0;
PDBTitle: crystal structure of human metapneumovirus fusion glycoprotein2 stabilized in the prefusion state
96c3ra3A_
not modelled 5.5 86
PDB header:de novo protein
Chain: A: PDB Molecule:p1c;
PDBTitle: crystal structure of a section of a de novo design gigadalton protein2 fibre
97c3lkiA_
not modelled 5.5 20
PDB header:transferase
Chain: A: PDB Molecule:fructokinase;
PDBTitle: crystal structure of fructokinase with bound atp from2 xylella fastidiosa
98c5l3qB_
not modelled 5.5 42
PDB header:protein transport
Chain: B: PDB Molecule:signal recognition particle receptor subunit alpha;
PDBTitle: structure of the gtpase heterodimer of human srp54 and sralpha
99c2v5hB_
not modelled 5.4 26
PDB header:transcription
Chain: B: PDB Molecule:acetylglutamate kinase;
PDBTitle: controlling the storage of nitrogen as arginine: the2 complex of pii and acetylglutamate kinase from3 synechococcus elongatus pcc 7942

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