Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1979c_(-)_2221727_2223172
DateMon Aug 5 13:25:08 BST 2019
Unique Job ID1825a319bda591f7
SequenceVVGPRTRGYA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:67.623 Y:59.274 Z:61.026
Model (left) based on template c4djiA_
Top template information
PDB header:transport protein
Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter;
PDBTitle: structure of glutamate-gaba antiporter gadc
Confidence and coverage
Confidence:100.0% Coverage: 93%
447 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4djiA_



100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter;
PDBTitle: structure of glutamate-gaba antiporter gadc
2c6f2wA_



100.0 23
PDB header:transport protein
Chain: A: PDB Molecule:putative amino acid/polyamine transport protein;
PDBTitle: bacterial asc transporter crystal structure in open to in conformation
3c6irtB_



100.0 21
PDB header:membrane protein
Chain: B: PDB Molecule:large neutral amino acids transporter small subunit 1;
PDBTitle: human lat1-4f2hc complex bound with bch
4c5oqtA_



100.0 20
PDB header:transport protein
Chain: A: PDB Molecule:amino acid transporter;
PDBTitle: crystal structure of a bacterial cationic amino acid transporter (cat)2 homologue
5c6nplA_



100.0 15
PDB header:membrane protein
Chain: A: PDB Molecule:solute carrier family 12 (sodium/potassium/chloride
PDBTitle: cryo-em structure of nkcc1
6c3giaA_



100.0 23
PDB header:transport protein
Chain: A: PDB Molecule:uncharacterized protein mj0609;
PDBTitle: crystal structure of apct transporter
7c6jmqA_



100.0 21
PDB header:membrane protein/immune system
Chain: A: PDB Molecule:large neutral amino acids transporter small subunit 1;
PDBTitle: lat1-cd98hc complex bound to mem-108 fab
8c3lrcC_



100.0 25
PDB header:transport protein
Chain: C: PDB Molecule:arginine/agmatine antiporter;
PDBTitle: structure of e. coli adic (p1)
9c6csfC_



100.0 14
PDB header:membrane protein
Chain: C: PDB Molecule:sodium/alanine symporter agcs;
PDBTitle: crystal structure of sodium/alanine symporter agcs with d-alanine2 bound
10c2jlnA_



100.0 12
PDB header:membrane protein
Chain: A: PDB Molecule:mhp1;
PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter
11c6c08F_



99.9 11
PDB header:membrane protein
Chain: F: PDB Molecule:sodium-coupled neutral amino acid transporter 9;
PDBTitle: zebrafish slc38a9 with arginine bound in the cytosol open state
12c5nvaA_



99.7 10
PDB header:membrane protein
Chain: A: PDB Molecule:putative sodium:solute symporter;
PDBTitle: substrate-bound outward-open state of a na+-coupled sialic acid2 symporter reveals a novel na+-site
13c6c08C_



99.6 11
PDB header:membrane protein
Chain: C: PDB Molecule:sodium-coupled neutral amino acid transporter 9;
PDBTitle: zebrafish slc38a9 with arginine bound in the cytosol open state
14c3dh4A_



99.6 11
PDB header:transport protein
Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus
15c2xq2A_



99.6 9
PDB header:transport protein
Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: structure of the k294a mutant of vsglt
16c5m87A_



99.3 10
PDB header:transport protein
Chain: A: PDB Molecule:divalent metal cation transporter mnth;
PDBTitle: crystal structure of eremococcus coleocola manganese transporter
17c4wgwA_



99.2 8
PDB header:transport protein
Chain: A: PDB Molecule:divalent metal cation transporter mnth;
PDBTitle: staphylococcus capitis divalent metal ion transporter (dmt) in complex2 with manganese
18c4wgvC_



99.2 8
PDB header:transport protein
Chain: C: PDB Molecule:divalent metal cation transporter mnth;
PDBTitle: crystal structure of staphylococcus capitis divalent metal ion2 transporter (dmt) in complex with nanobody
19c5i6xA_



98.8 14
PDB header:membrane protein
Chain: A: PDB Molecule:sodium-dependent serotonin transporter;
PDBTitle: x-ray structure of the ts3 human serotonin transporter complexed with2 paroxetine at the central site
20c4m48A_



98.8 11
PDB header:transport protein
Chain: A: PDB Molecule:transporter;
PDBTitle: x-ray structure of dopamine transporter elucidates antidepressant2 mechanism
21d2a65a1



not modelled 98.0 11
Fold:SNF-like
Superfamily:SNF-like
Family:SNF-like
22c4us3A_



not modelled 97.9 11
PDB header:transport protein
Chain: A: PDB Molecule:transporter;
PDBTitle: crystal structure of the bacterial nss member mhst in an2 occluded inward-facing state
23c4ainB_



not modelled 95.9 12
PDB header:membrane protein
Chain: B: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of betp with asymmetric protomers.
24c2w8aC_



not modelled 95.5 13
PDB header:membrane protein
Chain: C: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate
25c3hfxA_



not modelled 94.5 10
PDB header:transport protein
Chain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter;
PDBTitle: crystal structure of carnitine transporter
26c5kteA_



not modelled 85.0 10
PDB header:transport protein/immune system
Chain: A: PDB Molecule:divalent metal cation transporter mnth;
PDBTitle: crystal structure of deinococcus radiodurans mnth, an nramp-family2 transition metal transporter
27c4qtnB_



not modelled 41.2 8
PDB header:transport protein
Chain: B: PDB Molecule:nicotinamide riboside transporter pnuc;
PDBTitle: crystal structure of the vitamin b3 transporter pnuc
28c3j1zP_



not modelled 20.7 16
PDB header:metal transport
Chain: P: PDB Molecule:cation efflux family protein;
PDBTitle: inward-facing conformation of the zinc transporter yiip revealed by2 cryo-electron microscopy
29c6cc4A_



not modelled 15.2 9
PDB header:transport protein
Chain: A: PDB Molecule:soluble cytochrome b562, lipid ii flippase murj chimera;
PDBTitle: structure of murj from escherichia coli
30c4n7wA_



not modelled 11.9 12
PDB header:transport protein
Chain: A: PDB Molecule:transporter, sodium/bile acid symporter family;
PDBTitle: crystal structure of the sodium bile acid symporter from yersinia2 frederiksenii
31d1fftb2



not modelled 9.2 7
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
32c6n3qD_



not modelled 8.3 8
PDB header:transport protein
Chain: D: PDB Molecule:protein translocation protein sec63;
PDBTitle: cryo-em structure of the yeast sec complex
33c2lomA_



not modelled 5.4 13
PDB header:membrane protein
Chain: A: PDB Molecule:hig1 domain family member 1a;
PDBTitle: backbone structure of human membrane protein higd1a
34c4hkrB_



not modelled 5.4 10
PDB header:transport protein
Chain: B: PDB Molecule:calcium release-activated calcium channel protein 1;
PDBTitle: calcium release-activated calcium (crac) channel orai

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below