Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD1987_(-)_2231034_2231462
DateMon Aug 5 13:25:09 BST 2019
Unique Job IDa820c2cdd01525d1
SequenceMAGLNIYVRR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:33.670 Y:27.835 Z:40.875
Model (left) based on template c3ndyG_
Top template information
PDB header:hydrolase
Chain: G: PDB Molecule:endoglucanase d;
PDBTitle: the structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans
Confidence and coverage
Confidence:100.0% Coverage: 73%
104 residues ( 73% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ndyG_



100.0 29
PDB header:hydrolase
Chain: G: PDB Molecule:endoglucanase d;
PDBTitle: the structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans
2d1exha_



100.0 39
Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Carbohydrate-binding domain
Family:Cellulose-binding domain family II
3c2rttA_



100.0 43
PDB header:hydrolase
Chain: A: PDB Molecule:chic;
PDBTitle: solution structure of the chitin-binding domain of chi18ac from2 streptomyces coelicolor
4c6f7eA_



100.0 27
PDB header:carbohydrate
Chain: A: PDB Molecule:putative secreted cellulose binding protein;
PDBTitle: nmr solution structure of the cellulose-binding family 2 carbohydrate2 binding domain (cbm2) from sclpmo9c
5c3icgD_



99.9 26
PDB header:hydrolase
Chain: D: PDB Molecule:endoglucanase d;
PDBTitle: crystal structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans
6c2cwrA_



99.9 22
PDB header:hydrolase
Chain: A: PDB Molecule:chitinase;
PDBTitle: crystal structure of chitin biding domain of chitinase from2 pyrococcus furiosus
7c5dhdA_



99.9 28
PDB header:hydrolase
Chain: A: PDB Molecule:chitinase;
PDBTitle: crystal structure of chbd2 from thermococcus kodakarensis kod1
8d1e5ba_



99.8 22
Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Carbohydrate-binding domain
Family:Cellulose-binding domain family II
9d1hehc_



99.8 22
Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Carbohydrate-binding domain
Family:Cellulose-binding domain family II
10c6bt9B_



99.5 33
PDB header:hydrolase
Chain: B: PDB Molecule:chitinase;
PDBTitle: chitinase chia74 from bacillus thuringiensis
11d1qbaa2



97.9 19
Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:Carbohydrate-binding domain
Family:Bacterial chitobiase, n-terminal domain
12c1qbaA_



97.7 20
PDB header:glycosyl hydrolase
Chain: A: PDB Molecule:chitobiase;
PDBTitle: bacterial chitobiase, glycosyl hydrolase family 20
13c6ezrA_



97.2 20
PDB header:hydrolase
Chain: A: PDB Molecule:beta-n-acetylglucosaminidase nag2;
PDBTitle: crystal structure of gh20 exo beta-n-acetylglucosaminidase from vibrio2 harveyi
14c1wkyA_



93.6 10
PDB header:hydrolase
Chain: A: PDB Molecule:endo-beta-1,4-mannanase;
PDBTitle: crystal structure of alkaline mannanase from bacillus sp. strain jamb-2 602: catalytic domain and its carbohydrate binding module
15d1w8oa1



92.9 18
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:E-set domains of sugar-utilizing enzymes
16c2x3bB_



89.9 16
PDB header:hydrolase
Chain: B: PDB Molecule:toxic extracellular endopeptidase;
PDBTitle: asap1 inactive mutant e294a, an extracellular toxic zinc2 metalloendopeptidase
17c2l0dA_



77.4 14
PDB header:cell adhesion
Chain: A: PDB Molecule:cell surface protein;
PDBTitle: solution nmr structure of putative cell surface protein ma_4588 (272-2 376 domain) from methanosarcina acetivorans, northeast structural3 genomics consortium target mvr254a
18c4txgA_



77.4 20
PDB header:hydrolase
Chain: A: PDB Molecule:chitinase;
PDBTitle: crystal structure of a family gh18 chitinase from chromobacterium2 violaceum
19d1ifra_



75.5 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Lamin A/C globular tail domain
Family:Lamin A/C globular tail domain
20c2kl6A_



69.8 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of the cardb domain of pf1109 from2 pyrococcus furiosus. northeast structural genomics3 consortium target pfr193a
21c3jt0B_



not modelled 64.9 12
PDB header:structural protein
Chain: B: PDB Molecule:lamin-b1;
PDBTitle: crystal structure of the c-terminal fragment (426-558) lamin-b1 from2 homo sapiens, northeast structural genomics consortium target hr5546a
22c3qbtH_



not modelled 64.3 16
PDB header:protein transport/hydrolase
Chain: H: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1;
PDBTitle: crystal structure of ocrl1 540-678 in complex with rab8a:gppnhp
23d1ivta_



not modelled 63.9 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Lamin A/C globular tail domain
Family:Lamin A/C globular tail domain
24c5d6hA_



not modelled 61.7 11
PDB header:chaperone/protein transport
Chain: A: PDB Molecule:csuc;
PDBTitle: crystal structure of csuc-csua/b chaperone-major subunit pre-assembly2 complex from csu biofilm-mediating pili of acinetobacter baumannii
25c5xswA_



not modelled 61.5 12
PDB header:hydrolase
Chain: A: PDB Molecule:chitinase;
PDBTitle: crystal structure of an archaeal chitinase in the substrate-complex2 form (p63)
26d1ufga_



not modelled 57.7 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Lamin A/C globular tail domain
Family:Lamin A/C globular tail domain
27d2vzsa2



not modelled 50.9 18
Fold:Immunoglobulin-like beta-sandwich
Superfamily:beta-Galactosidase/glucuronidase domain
Family:beta-Galactosidase/glucuronidase domain
28c2lllA_



not modelled 48.2 30
PDB header:structural protein
Chain: A: PDB Molecule:lamin-b2;
PDBTitle: solution nmr structure of c-terminal globular domain of human lamin-2 b2, northeast structural genomics consortium target hr8546a
29c1yewI_



not modelled 44.1 16
PDB header:oxidoreductase, membrane protein
Chain: I: PDB Molecule:particulate methane monooxygenase, b subunit;
PDBTitle: crystal structure of particulate methane monooxygenase
30c3rgbA_



not modelled 42.5 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:methane monooxygenase subunit b2;
PDBTitle: crystal structure of particulate methane monooxygenase from2 methylococcus capsulatus (bath)
31c5dfkA_



not modelled 41.7 14
PDB header:structural protein
Chain: A: PDB Molecule:probable fimbrial chaperone ecpb;
PDBTitle: crystal structure of the escherichia coli common pilus chaperone, ecpb
32c4hcgA_



not modelled 39.4 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:cupredoxin 1;
PDBTitle: uncharacterized cupredoxin-like domain protein cupredoxin_1 with zinc2 bound from bacillus anthracis
33c6q7jB_



not modelled 37.2 17
PDB header:hydrolase
Chain: B: PDB Molecule:exo-1,4-beta-xylosidase xlnd;
PDBTitle: gh3 exo-beta-xylosidase (xlnd) in complex with xylobiose aziridine2 activity based probe
34c3zmrA_



not modelled 36.2 13
PDB header:hydrolase
Chain: A: PDB Molecule:cellulase (glycosyl hydrolase family 5);
PDBTitle: bacteroides ovatus gh5 xyloglucanase in complex with a xxxg2 heptasaccharide
35c2f1eA_



not modelled 36.2 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein apag;
PDBTitle: solution structure of apag protein
36c2e6jA_



not modelled 34.8 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hydin protein;
PDBTitle: solution structure of the c-terminal papd-like domain from2 human hydin protein
37c4f2eA_



not modelled 33.5 8
PDB header:metal transport
Chain: A: PDB Molecule:cupa;
PDBTitle: crystal structure of the streptococcus pneumoniae d39 copper chaperone2 cupa with cu(i)
38c3isyA_



not modelled 33.1 16
PDB header:protein binding
Chain: A: PDB Molecule:intracellular proteinase inhibitor;
PDBTitle: crystal structure of an intracellular proteinase inhibitor (ipi,2 bsu11130) from bacillus subtilis at 2.61 a resolution
39d1xvsa_



not modelled 32.8 28
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ApaG-like
Family:ApaG-like
40c4f2fA_



not modelled 32.2 12
PDB header:metal binding protein
Chain: A: PDB Molecule:cation-transporting atpase, e1-e2 family protein;
PDBTitle: crystal structure of the metal binding domain (mbd) of the2 streptococcus pneumoniae d39 cu(i) exporting p-type atpase copa with3 cu(i)
41c5e09A_



not modelled 28.9 10
PDB header:hydrolase
Chain: A: PDB Molecule:cellulase;
PDBTitle: structural insight of a trimodular halophilic cellulase with a family2 46 carbohydrate-binding module
42d1wzla2



not modelled 28.7 16
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
43c3qisA_



not modelled 27.3 16
PDB header:hydrolase/protein binding
Chain: A: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1;
PDBTitle: recognition of the f&h motif by the lowe syndrome protein ocrl
44d1tzaa_



not modelled 26.9 26
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ApaG-like
Family:ApaG-like
45c2kutA_



not modelled 24.6 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of gmr58a from geobacter metallireducens.2 northeast structural genomics consortium target gmr58a
46c2ahnA_



not modelled 23.8 15
PDB header:allergen
Chain: A: PDB Molecule:thaumatin-like protein;
PDBTitle: high resolution structure of a cherry allergen pru av 2
47c2nc8A_



not modelled 23.5 23
PDB header:protein binding
Chain: A: PDB Molecule:lipoprotein lppm;
PDBTitle: nmr structure of the mycobacterium tuberculosis lppm (rv2171) protein2 folded domain
48c5aj3c_



not modelled 22.5 50
PDB header:ribosome
Chain: C: PDB Molecule:mitoribosomal protein us3m, mrps24;
PDBTitle: structure of the small subunit of the mammalian mitoribosome
49d1e42a1



not modelled 21.8 21
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Clathrin adaptor appendage domain
Family:Alpha-adaptin ear subdomain-like
50c4ncdA_



not modelled 21.1 12
PDB header:chaperone
Chain: A: PDB Molecule:gram-negative pili assembly chaperone, n-terminal domain
PDBTitle: crystal structure of class 5 fimbriae chaperone cfaa
51c6b7lA_



not modelled 19.4 20
PDB header:unknown function
Chain: A: PDB Molecule:immune modulator a;
PDBTitle: aeromonas veronii immune modulator a
52d1xq4a_



not modelled 19.1 29
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ApaG-like
Family:ApaG-like
53c2x41A_



not modelled 18.4 16
PDB header:hydrolase
Chain: A: PDB Molecule:beta-glucosidase;
PDBTitle: structure of beta-glucosidase 3b from thermotoga neapolitana in2 complex with glucose
54d1ehxa_



not modelled 16.5 13
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Cellulosomal scaffoldin protein CipC, module x2.1
55c3u07A_



not modelled 15.0 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein vpa0106;
PDBTitle: crystal structure of the vpa0106 protein from vibrio parahaemolyticus.2 northeast structural genomics consortium target vpr106.
56c3fn2A_



not modelled 14.7 40
PDB header:transferase
Chain: A: PDB Molecule:putative sensor histidine kinase domain;
PDBTitle: crystal structure of a putative sensor histidine kinase domain from2 clostridium symbiosum atcc 14940
57c3pe9A_



not modelled 14.7 10
PDB header:unknown function
Chain: A: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
58c3pe9C_



not modelled 14.7 10
PDB header:unknown function
Chain: C: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
59d1ji1a2



not modelled 14.2 10
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
60c2criA_



not modelled 14.2 25
PDB header:transport protein
Chain: A: PDB Molecule:vesicle-associated membrane protein-associated
PDBTitle: solution structure of the msp domain of mouse vamp-2 associated proteina
61c1e42A_



not modelled 13.7 21
PDB header:endocytosis
Chain: A: PDB Molecule:ap-2 complex subunit beta;
PDBTitle: beta2-adaptin appendage domain, from clathrin adaptor ap2
62c5cn1A_



not modelled 13.5 21
PDB header:protein transport
Chain: A: PDB Molecule:adp-ribosylation factor-binding protein gga1;
PDBTitle: crystal structure of yeast gga1_gae domain-p21
63c5z87B_



not modelled 13.0 13
PDB header:hydrolase
Chain: B: PDB Molecule:emgh1;
PDBTitle: structural of a novel b-glucosidase emgh1 at 2.3 angstrom from2 erythrobacter marinus
64d1kyfa1



not modelled 12.9 6
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Clathrin adaptor appendage domain
Family:Alpha-adaptin ear subdomain-like
65d1jv2a3



not modelled 12.6 10
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Integrin domains
Family:Integrin domains
66c1z9oB_



not modelled 12.5 18
PDB header:protein binding/lipid binding protein
Chain: B: PDB Molecule:vesicle-associated membrane protein-associated protein a;
PDBTitle: 1.9 angstrom crystal structure of the rat vap-a msp homology domain in2 complex with the rat orp1 ffat motif
67d2vj0a1



not modelled 12.4 6
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Clathrin adaptor appendage domain
Family:Alpha-adaptin ear subdomain-like
68c4oleD_



not modelled 12.2 21
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:next to brca1 gene 1 protein;
PDBTitle: crystal structure of a neighbor of brca1 gene 1 (nbr1) from homo2 sapiens at 2.52 a resolution
69c4rt6A_



not modelled 11.1 22
PDB header:protein binding
Chain: A: PDB Molecule:heme/hemopexin-binding protein;
PDBTitle: structure of a complex between hemopexin and hemopexin binding protein
70c1ky6A_



not modelled 11.1 6
PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:alpha-adaptin c;
PDBTitle: ap-2 clathrin adaptor alpha-appendage in complex with epsin2 dpw peptide
71c2ys4A_



not modelled 10.2 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hydrocephalus-inducing protein homolog;
PDBTitle: solution structure of the n-terminal papd-like domain of2 hydin protein from human
72c2aanA_



not modelled 9.8 6
PDB header:electron transport
Chain: A: PDB Molecule:auracyanin a;
PDBTitle: auracyanin a: a "blue" copper protein from the green thermophilic2 photosynthetic bacterium,chloroflexus aurantiacus
73c3ac0B_



not modelled 9.5 16
PDB header:hydrolase
Chain: B: PDB Molecule:beta-glucosidase i;
PDBTitle: crystal structure of beta-glucosidase from kluyveromyces marxianus in2 complex with glucose
74d1lmia_



not modelled 9.4 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Antigen MPT63/MPB63 (immunoprotective extracellular protein)
Family:Antigen MPT63/MPB63 (immunoprotective extracellular protein)
75d1wica_



not modelled 8.7 23
Fold:Immunoglobulin-like beta-sandwich
Superfamily:PapD-like
Family:MSP-like
76c5wabD_



not modelled 8.7 14
PDB header:hydrolase
Chain: D: PDB Molecule:putative beta-glucosidase;
PDBTitle: crystal structure of bifidobacterium adolescentis gh3 beta-glucosidase
77c5jp0A_



not modelled 8.7 21
PDB header:hydrolase
Chain: A: PDB Molecule:beta-glucosidase bogh3b;
PDBTitle: bacteroides ovatus xyloglucan pul gh3b with bound glucose
78c3mnmC_



not modelled 8.6 16
PDB header:protein transport
Chain: C: PDB Molecule:adp-ribosylation factor-binding protein gga2;
PDBTitle: crystal structure of gae domain of gga2p from saccharomyces cerevisiae
79d1ejxb_



not modelled 8.4 23
Fold:beta-clip
Superfamily:Urease, beta-subunit
Family:Urease, beta-subunit
80d1du5a_



not modelled 8.2 18
Fold:Osmotin, thaumatin-like protein
Superfamily:Osmotin, thaumatin-like protein
Family:Osmotin, thaumatin-like protein
81c3g7mA_



not modelled 8.2 20
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:xylanase inhibitor tl-xi;
PDBTitle: structure of the thaumatin-like xylanase inhibitor tlxi
82c3u48A_



not modelled 7.9 19
PDB header:hydrolase
Chain: A: PDB Molecule:jmb19063;
PDBTitle: from soil to structure: a novel dimeric family 3-beta-glucosidase2 isolated from compost using metagenomic analysis
83c2d4nA_



not modelled 7.9 7
PDB header:hydrolase
Chain: A: PDB Molecule:du;
PDBTitle: crystal structure of m-pmv dutpase complexed with dupnpp, substrate2 analogue
84c2w2sA_



not modelled 7.8 36
PDB header:viral protein
Chain: A: PDB Molecule:matrix protein;
PDBTitle: structure of the lagos bat virus matrix protein
85c2l8aA_



not modelled 7.7 16
PDB header:hydrolase
Chain: A: PDB Molecule:endoglucanase;
PDBTitle: structure of a novel cbm3 lacking the calcium-binding site
86c3m86B_



not modelled 7.6 13
PDB header:protein binding
Chain: B: PDB Molecule:amoebiasin-2;
PDBTitle: crystal structure of the cysteine protease inhibitor, ehicp2, from2 entamoeba histolytica
87d1duna_



not modelled 7.6 20
Fold:beta-clip
Superfamily:dUTPase-like
Family:dUTPase-like
88c6rimB_



not modelled 7.5 23
PDB header:toxin
Chain: B: PDB Molecule:putative botulinum-like toxin wo;
PDBTitle: crystal structure of the catalytic domain of the weissela oryzae2 botulinum like toxin
89c2qsvA_



not modelled 7.4 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of protein of unknown function from porphyromonas2 gingivalis w83
90c5tf0B_



not modelled 7.4 20
PDB header:hydrolase
Chain: B: PDB Molecule:glycosyl hydrolase family 3 n-terminal domain protein;
PDBTitle: crystal structure of glycosil hydrolase family 3 n-terminal domain2 protein from bacteroides intestinalis
91d1z45a1



not modelled 7.2 12
Fold:Supersandwich
Superfamily:Galactose mutarotase-like
Family:Aldose 1-epimerase (mutarotase)
92d1pcva_



not modelled 7.2 18
Fold:Osmotin, thaumatin-like protein
Superfamily:Osmotin, thaumatin-like protein
Family:Osmotin, thaumatin-like protein
93c1mqsB_



not modelled 7.1 67
PDB header:endocytosis/exocytosis
Chain: B: PDB Molecule:integral membrane protein sed5;
PDBTitle: crystal structure of sly1p in complex with an n-terminal peptide of2 sed5p
94d4ubpb_



not modelled 7.1 15
Fold:beta-clip
Superfamily:Urease, beta-subunit
Family:Urease, beta-subunit
95c3pdgA_



not modelled 6.9 3
PDB header:unknown function
Chain: A: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
96c3dcdA_



not modelled 6.8 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:galactose mutarotase related enzyme;
PDBTitle: x-ray structure of the galactose mutarotase related enzyme q5fkd7 from2 lactobacillus acidophilus at the resolution 1.9a. northeast3 structural genomics consortium target lar33.
97c1l9mB_



not modelled 6.6 14
PDB header:transferase
Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3;
PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation
98c3a5vA_



not modelled 6.6 17
PDB header:hydrolase
Chain: A: PDB Molecule:alpha-galactosidase;
PDBTitle: crystal structure of alpha-galactosidase i from mortierella vinacea
99d1mspa_



not modelled 6.6 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:PapD-like
Family:MSP-like

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