Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2025c_(-)_2270758_2271756
DateMon Aug 5 13:25:13 BST 2019
Unique Job ID26726650cc81fde8
SequenceMTHDHAHSRG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.249 Y:61.575 Z:94.479
Model (left) based on template c3j1zP_
Top template information
PDB header:metal transport
Chain: P: PDB Molecule:cation efflux family protein;
PDBTitle: inward-facing conformation of the zinc transporter yiip revealed by2 cryo-electron microscopy
Confidence and coverage
Confidence:100.0% Coverage: 88%
292 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3j1zP_



100.0 23
PDB header:metal transport
Chain: P: PDB Molecule:cation efflux family protein;
PDBTitle: inward-facing conformation of the zinc transporter yiip revealed by2 cryo-electron microscopy
2c2qfiB_



100.0 24
PDB header:transport protein
Chain: B: PDB Molecule:ferrous-iron efflux pump fief;
PDBTitle: structure of the zinc transporter yiip
3d2qfia2



100.0 24
Fold:Cation efflux protein transmembrane domain-like
Superfamily:Cation efflux protein transmembrane domain-like
Family:Cation efflux protein transmembrane domain-like
4c5ho5D_



99.7 17
PDB header:metal transport
Chain: D: PDB Molecule:magnetosome protein mamb;
PDBTitle: mamb
5c2zztA_



99.7 20
PDB header:transport protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the cytosolic domain of the cation2 diffusion facilitator family protein
6c6g6iB_



99.7 24
PDB header:metal transport
Chain: B: PDB Molecule:magnetosome protein mamm;
PDBTitle: mamm ctd w247a
7d3bypa1



99.7 28
Fold:Alpha-lytic protease prodomain-like
Superfamily:Cation efflux protein cytoplasmic domain-like
Family:Cation efflux protein cytoplasmic domain-like
8c3w66A_



99.7 23
PDB header:metal transport
Chain: A: PDB Molecule:magnetosome protein mamm;
PDBTitle: mamm-ctd d249a and h285a
9c6qekB_



99.7 23
PDB header:transport protein
Chain: B: PDB Molecule:magnetosome protein;
PDBTitle: putative membrane tansporter, magnetosome protein mamm ctd2 [desulfamplus magnetovallimortis bw-1]
10d2qfia1



99.5 23
Fold:Alpha-lytic protease prodomain-like
Superfamily:Cation efflux protein cytoplasmic domain-like
Family:Cation efflux protein cytoplasmic domain-like
11c6qfjA_



97.4 19
PDB header:transport protein
Chain: A: PDB Molecule:magnetosome membrane protein mamb, putative co/zn/cd cation
PDBTitle: mamb ctd magnetosome protein [desulfamplus magnetovallimortis bw-1]
12c3cd0B_



68.4 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:3-hydroxy-3-methylglutaryl-coenzyme a reductase;
PDBTitle: thermodynamic and structure guided design of statin hmg-coa reductase2 inhibitors
13c1hwjB_



66.6 10
PDB header:oxidoreductase
Chain: B: PDB Molecule:hmg-coa reductase;
PDBTitle: complex of the catalytic portion of human hmg-coa reductase2 with cerivastatin
14c4djiA_



65.3 9
PDB header:transport protein
Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter;
PDBTitle: structure of glutamate-gaba antiporter gadc
15d1ib8a2



62.0 10
Fold:Alpha-lytic protease prodomain-like
Superfamily:YhbC-like, N-terminal domain
Family:YhbC-like, N-terminal domain
16c1oy8A_



60.4 13
PDB header:membrane protein
Chain: A: PDB Molecule:acriflavine resistance protein b;
PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump
17c4ir7A_



57.5 11
PDB header:transferase
Chain: A: PDB Molecule:long chain fatty acid coa ligase fadd10;
PDBTitle: crystal structure of mtb fadd10 in complex with dodecanoyl-amp
18d1u8sa1



51.8 13
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Glycine cleavage system transcriptional repressor
19d1dqaa1



50.9 10
Fold:Ferredoxin-like
Superfamily:NAD-binding domain of HMG-CoA reductase
Family:NAD-binding domain of HMG-CoA reductase
20d1iwga3



50.1 5
Fold:Ferredoxin-like
Superfamily:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Family:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
21c1u8sB_



not modelled 48.0 19
PDB header:transcription
Chain: B: PDB Molecule:glycine cleavage system transcriptional
PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor
22c3lnoA_



not modelled 46.4 18
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of domain of unknown function duf59 from2 bacillus anthracis
23d1ghha_



not modelled 44.5 8
Fold:DNA damage-inducible protein DinI
Superfamily:DNA damage-inducible protein DinI
Family:DNA damage-inducible protein DinI
24d1u8sa2



not modelled 43.3 19
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Glycine cleavage system transcriptional repressor
25c2jp3A_



not modelled 40.5 9
PDB header:transcription
Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4;
PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
26d2fcja1



not modelled 40.3 18
Fold:Toprim domain
Superfamily:Toprim domain
Family:Toprim domain
27c3eynB_



not modelled 39.0 10
PDB header:ligase
Chain: B: PDB Molecule:acyl-coenzyme a synthetase acsm2a;
PDBTitle: crystal structure of human acyl-coa synthetase medium-chain2 family member 2a (l64p mutation) in a complex with coa
28c5irdA_



not modelled 38.5 17
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of rv1466 from mycobacterium tuberculosis, a2 protein associated with [fe-s] complex assembly and repair - seattle3 structural genomics center for infectious disease target4 mytud.17486.a
29c5ensA_



not modelled 37.4 6
PDB header:transport protein
Chain: A: PDB Molecule:multidrug efflux pump subunit acrb,multidrug efflux pump
PDBTitle: rhodamine bound structure of bacterial efflux pump.
30d1fftb2



not modelled 36.3 14
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
31c1v55B_



not modelled 35.4 11
PDB header:oxidoreductase
Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii;
PDBTitle: bovine heart cytochrome c oxidase at the fully reduced state
32d1xhja_



not modelled 34.8 11
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:NifU C-terminal domain-like
33c6hu9n_



not modelled 31.4 11
PDB header:oxidoreductase/electron transport
Chain: N: PDB Molecule:cytochrome b;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
34c3b47A_



not modelled 31.4 14
PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: periplasmic sensor domain of chemotaxis protein gsu0582
35d2cu6a1



not modelled 29.7 10
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:PaaD-like
36d1zpva1



not modelled 28.8 12
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:SP0238-like
37c1ib8A_



not modelled 28.8 10
PDB header:nucleic acid binding protein
Chain: A: PDB Molecule:conserved protein sp14.3;
PDBTitle: solution structure and function of a conserved protein2 sp14.3 encoded by an essential streptococcus pneumoniae3 gene
38d1iwga1



not modelled 28.4 10
Fold:Ferredoxin-like
Superfamily:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Family:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
39c2zxeG_



not modelled 27.2 28
PDB header:hydrolase/transport protein
Chain: G: PDB Molecule:phospholemman-like protein;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
40c4a01B_



not modelled 26.5 8
PDB header:hydrolase
Chain: B: PDB Molecule:proton pyrophosphatase;
PDBTitle: crystal structure of the h-translocating pyrophosphatase
41d1dlca3



not modelled 25.1 15
Fold:Toxins' membrane translocation domains
Superfamily:delta-Endotoxin (insectocide), N-terminal domain
Family:delta-Endotoxin (insectocide), N-terminal domain
42d1ji6a3



not modelled 24.8 15
Fold:Toxins' membrane translocation domains
Superfamily:delta-Endotoxin (insectocide), N-terminal domain
Family:delta-Endotoxin (insectocide), N-terminal domain
43c6humB_



not modelled 23.9 12
PDB header:proton transport
Chain: B: PDB Molecule:nad(p)h-quinone oxidoreductase subunit 2;
PDBTitle: structure of the photosynthetic complex i from thermosynechococcus2 elongatus
44c3uz0A_



not modelled 23.2 8
PDB header:transport protein
Chain: A: PDB Molecule:stage iii sporulation protein ah;
PDBTitle: crystal structure of spoiiiah and spoiiq complex
45c6nplA_



not modelled 21.8 14
PDB header:membrane protein
Chain: A: PDB Molecule:solute carrier family 12 (sodium/potassium/chloride
PDBTitle: cryo-em structure of nkcc1
46c2yevB_



not modelled 21.3 15
PDB header:electron transport
Chain: B: PDB Molecule:cytochrome c oxidase subunit 2;
PDBTitle: structure of caa3-type cytochrome oxidase
47c3e7wA_



not modelled 20.8 12
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1;
PDBTitle: crystal structure of dlta: implications for the reaction mechanism of2 non-ribosomal peptide synthetase (nrps) adenylation domains
48c5udtD_



not modelled 19.9 9
PDB header:transferase
Chain: D: PDB Molecule:lactate racemization operon protein lare;
PDBTitle: lare, a sulfur transferase involved in synthesis of the cofactor for2 lactate racemase, in complex with amp
49c2jo1A_



not modelled 18.5 14
PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
50c1ji6A_



not modelled 18.2 13
PDB header:toxin
Chain: A: PDB Molecule:pesticidial crystal protein cry3bb;
PDBTitle: crystal structure of the insecticidal bacterial del endotoxin cry3bb12 bacillus thuringiensis
51c5ifiA_



not modelled 17.6 16
PDB header:ligase
Chain: A: PDB Molecule:acetyl-coenzyme a synthetase;
PDBTitle: crystal structure of acetyl-coa synthetase in complex with adenosine-2 5'-propylphosphate from cryptococcus neoformans h99
52c2y27B_



not modelled 17.2 14
PDB header:ligase
Chain: B: PDB Molecule:phenylacetate-coenzyme a ligase;
PDBTitle: crystal structure of paak1 in complex with atp from burkholderia2 cenocepacia
53c2jnvA_



not modelled 16.5 16
PDB header:metal transport
Chain: A: PDB Molecule:nifu-like protein 1, chloroplast;
PDBTitle: solution structure of c-terminal domain of nifu-like2 protein from oryza sativa
54c3tufA_



not modelled 15.5 11
PDB header:signaling protein
Chain: A: PDB Molecule:stage iii sporulation protein ah;
PDBTitle: structure of the spoiiq-spoiiiah pore forming complex.
55c2mkvA_



not modelled 15.1 11
PDB header:transport protein
Chain: A: PDB Molecule:sodium/potassium-transporting atpase subunit gamma;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd2b in micelles
56c3qovD_



not modelled 14.9 12
PDB header:ligase
Chain: D: PDB Molecule:phenylacetate-coenzyme a ligase;
PDBTitle: crystal structure of a hypothetical acyl-coa ligase (bt_0428) from2 bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution
57c5m87A_



not modelled 14.6 17
PDB header:transport protein
Chain: A: PDB Molecule:divalent metal cation transporter mnth;
PDBTitle: crystal structure of eremococcus coleocola manganese transporter
58d1x38a2



not modelled 14.5 17
Fold:Flavodoxin-like
Superfamily:Beta-D-glucan exohydrolase, C-terminal domain
Family:Beta-D-glucan exohydrolase, C-terminal domain
59c3l8cA_



not modelled 14.3 13
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1;
PDBTitle: structure of probable d-alanine--poly(phosphoribitol) ligase subunit-12 from streptococcus pyogenes
60d1knya2



not modelled 14.2 9
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:Kanamycin nucleotidyltransferase (KNTase), N-terminal domain
61d1ofua2



not modelled 14.0 16
Fold:Bacillus chorismate mutase-like
Superfamily:Tubulin C-terminal domain-like
Family:Tubulin, C-terminal domain
62c5gxdA_



not modelled 13.9 15
PDB header:lyase
Chain: A: PDB Molecule:amp-dependent synthetase and ligase;
PDBTitle: structure of acryloyl-coa lyase prpe from dinoroseobacter shibae dfl2 12
63c4jcuC_



not modelled 13.9 15
PDB header:isomerase
Chain: C: PDB Molecule:5-carboxymethyl-2-hydroxymuconate isomerase;
PDBTitle: crystal structure of a 5-carboxymethyl-2-hydroxymuconate isomerase2 from deinococcus radiodurans r1
64c3dhvA_



not modelled 13.6 15
PDB header:ligase
Chain: A: PDB Molecule:d-alanine-poly(phosphoribitol) ligase;
PDBTitle: crystal structure of dlta protein in complex with d-alanine2 adenylate
65c4px7A_



not modelled 13.4 12
PDB header:hydrolase
Chain: A: PDB Molecule:phosphatidylglycerophosphatase;
PDBTitle: crystal structure of lipid phosphatase e. coli pgpb
66c1qleB_



not modelled 13.1 6
PDB header:oxidoreductase/immune system
Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii;
PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit cytochrome2 c oxidase in the completely oxidized state complexed with an antibody3 fv fragment
67c1ar1B_



not modelled 13.1 6
PDB header:complex (oxidoreductase/antibody)
Chain: B: PDB Molecule:cytochrome c oxidase;
PDBTitle: structure at 2.7 angstrom resolution of the paracoccus2 denitrificans two-subunit cytochrome c oxidase complexed3 with an antibody fv fragment
68c2gjvF_



not modelled 13.0 8
PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:putative cytoplasmic protein;
PDBTitle: crystal structure of a protein of unknown function from salmonella2 typhimurium
69c4o6mA_



not modelled 13.0 14
PDB header:transferase
Chain: A: PDB Molecule:af2299, a cdp-alcohol phosphotransferase;
PDBTitle: structure of af2299, a cdp-alcohol phosphotransferase (cmp-bound)
70d1uwda_



not modelled 12.7 16
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:PaaD-like
71c6raoH_



not modelled 12.5 11
PDB header:virus like particle
Chain: H: PDB Molecule:afp9;
PDBTitle: cryo-em structure of the anti-feeding prophage (afp) baseplate, 6-fold2 symmetrised
72c5gl6A_



not modelled 12.3 19
PDB header:ribosomal protein
Chain: A: PDB Molecule:ribosome maturation factor rimp;
PDBTitle: msmeg rimp
73c2kz0A_



not modelled 11.2 17
PDB header:transcription
Chain: A: PDB Molecule:bola family protein;
PDBTitle: solution structure of a bola protein (ech_0303) from ehrlichia2 chaffeensis. seattle structural genomics center for infectious3 disease target ehcha.10365.a
74d1th5a1



not modelled 11.0 10
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:NifU C-terminal domain-like
75c3j20C_



not modelled 11.0 8
PDB header:ribosome
Chain: C: PDB Molecule:30s ribosomal protein s3p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
76c3eb7B_



not modelled 10.9 21
PDB header:toxin
Chain: B: PDB Molecule:insecticidal delta-endotoxin cry8ea1;
PDBTitle: crystal structure of insecticidal delta-endotoxin cry8ea1 from2 bacillus thuringiensis at 2.2 angstroms resolution
77c1ex1A_



not modelled 10.8 17
PDB header:hydrolase
Chain: A: PDB Molecule:protein (beta-d-glucan exohydrolase isoenzyme exo1);
PDBTitle: beta-d-glucan exohydrolase from barley
78d3dtub2



not modelled 10.8 8
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
79d1mlia_



not modelled 10.6 19
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Muconalactone isomerase, MLI
80c2kwaA_



not modelled 10.6 11
PDB header:transferase inhibitor
Chain: A: PDB Molecule:kinase a inhibitor;
PDBTitle: 1h, 13c and 15n backbone and side chain resonance assignments of the2 n-terminal domain of the histidine kinase inhibitor kipi from3 bacillus subtilis
81c3rfuC_



not modelled 10.4 12
PDB header:hydrolase, membrane protein
Chain: C: PDB Molecule:copper efflux atpase;
PDBTitle: crystal structure of a copper-transporting pib-type atpase
82c3a0hi_



not modelled 10.4 25
PDB header:electron transport
Chain: I: PDB Molecule:photosystem ii reaction center protein i;
PDBTitle: crystal structure of i-substituted photosystem ii complex
83d2axti1



not modelled 10.4 25
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein I, PsbI
Family:PsbI-like
84c4mndA_



not modelled 10.3 6
PDB header:transferase
Chain: A: PDB Molecule:ctp l-myo-inositol-1-phosphate cytidylyltransferase/cdp-l-
PDBTitle: crystal structure of archaeoglobus fulgidus ipct-dipps bifunctional2 membrane protein
85c2phcB_



not modelled 10.1 21
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein ph0987;
PDBTitle: crystal structure of conserved uncharacterized protein ph0987 from2 pyrococcus horikoshii
86c3upsA_



not modelled 10.0 7
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:iojap-like protein;
PDBTitle: crystal structure of iojap-like protein from zymomonas mobilis
87c5lw6A_



not modelled 10.0 14
PDB header:adp-ribose binding protein
Chain: A: PDB Molecule:ddb_g0293866;
PDBTitle: crystal structure of a se-met substituted dictyostelium discoideum2 adp-ribose binding macrodomain (residues 342-563) of ddb_g0293866
88c3zz1A_



not modelled 9.8 31
PDB header:hydrolase
Chain: A: PDB Molecule:beta-d-glucoside glucohydrolase;
PDBTitle: crystal structure of a glycoside hydrolase family 3 beta-glucosidase,2 bgl1 from hypocrea jecorina at 2.1a resolution.
89d1bdfa1



not modelled 9.7 12
Fold:DCoH-like
Superfamily:RBP11-like subunits of RNA polymerase
Family:RNA polymerase alpha subunit dimerisation domain
90c3ibwA_



not modelled 9.7 8
PDB header:transferase
Chain: A: PDB Molecule:gtp pyrophosphokinase;
PDBTitle: crystal structure of the act domain from gtp pyrophosphokinase of2 chlorobium tepidum. northeast structural genomics consortium target3 ctr148a
91c1dlcA_



not modelled 9.7 15
PDB header:toxin
Chain: A: PDB Molecule:delta-endotoxin cryiiia;
PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution
92c3abfB_



not modelled 9.7 2
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate tautomerase;
PDBTitle: crystal structure of a 4-oxalocrotonate tautomerase homologue2 (tthb242)
93d1m56d_



not modelled 9.6 5
Fold:Single transmembrane helix
Superfamily:Bacterial aa3 type cytochrome c oxidase subunit IV
Family:Bacterial aa3 type cytochrome c oxidase subunit IV
94c3b64A_



not modelled 9.5 10
PDB header:cytokine
Chain: A: PDB Molecule:macrophage migration inhibitory factor-like
PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major
95d2gjva1



not modelled 9.5 8
Fold:Phage tail protein-like
Superfamily:Phage tail protein-like
Family:STM4215-like
96d2atza1



not modelled 9.4 11
Fold:Prim-pol domain
Superfamily:Prim-pol domain
Family:HP0184-like
97c3iteB_



not modelled 9.3 9
PDB header:ligase
Chain: B: PDB Molecule:sidn siderophore synthetase;
PDBTitle: the third adenylation domain of the fungal sidn non-ribosomal peptide2 synthetase
98d1i1ga2



not modelled 9.2 15
Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Lrp/AsnC-like transcriptional regulator C-terminal domain
99c4i3gB_



not modelled 9.1 13
PDB header:hydrolase
Chain: B: PDB Molecule:beta-glucosidase;
PDBTitle: crystal structure of desr, a beta-glucosidase from streptomyces2 venezuelae in complex with d-glucose.

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below