Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2030c_(-)_2276449_2278494
DateMon Aug 5 13:25:14 BST 2019
Unique Job ID9e7caa1db3d2ecdb
SequenceVLMTAAADVT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:57.169 Y:62.649 Z:61.849
Model (left) based on template d3b55a1
Top template information
Fold:EreA/ChaN-like
Superfamily:EreA/ChaN-like
Family:EreA-like
Confidence and coverage
Confidence:100.0% Coverage: 56%
384 residues ( 56% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
605 residues ( 89%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d3b55a1



100.0 20
Fold:EreA/ChaN-like
Superfamily:EreA/ChaN-like
Family:EreA-like
2c2radB_



100.0 20
PDB header:biosynthetic protein
Chain: B: PDB Molecule:succinoglycan biosynthesis protein;
PDBTitle: crystal structure of the succinoglycan biosynthesis2 protein. northeast structural genomics consortium target3 bcr135
3d2qgma1



100.0 24
Fold:EreA/ChaN-like
Superfamily:EreA/ChaN-like
Family:EreA-like
4c2qgmA_



100.0 24
PDB header:biosynthetic protein
Chain: A: PDB Molecule:succinoglycan biosynthesis protein;
PDBTitle: crystal structure of succinoglycan biosynthesis protein at the2 resolution 1.7 a. northeast structural genomics consortium target3 bcr136.
5d1wd5a_



100.0 42
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
6c1ecjB_



99.7 23
PDB header:transferase
Chain: B: PDB Molecule:glutamine phosphoribosylpyrophosphate
PDBTitle: escherichia coli glutamine phosphoribosylpyrophosphate2 (prpp) amidotransferase complexed with 2 amp per tetramer
7c1gph1_



99.6 25
PDB header:transferase
Chain: 1: PDB Molecule:glutamine phosphoribosyl-pyrophosphate amidotransferase;
PDBTitle: structure of the allosteric regulatory enzyme of purine biosynthesis
8d1hgxa_



99.5 18
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
9c5eswB_



99.5 26
PDB header:transferase
Chain: B: PDB Molecule:purine/pyrimidine phosphoribosyltransferase;
PDBTitle: crystal structure of apo hypoxanthine-guanine2 phosphoribosyltransferase from legionella pneumophila
10d1ecfa1



99.5 27
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
11d1yfza1



99.5 22
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
12c1yfzA_



99.5 22
PDB header:transferase
Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase;
PDBTitle: novel imp binding in feedback inhibition of hypoxanthine-guanine2 phosphoribosyltransferase from thermoanaerobacter tengcongensis
13d1gph11



99.5 24
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
14c2ywtA_



99.5 20
PDB header:transferase
Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase;
PDBTitle: crystal structure of hypoxanthine-guanine2 phosphoribosyltransferase with gmp from thermus3 thermophilus hb8
15c3kb8A_



99.5 22
PDB header:transferase
Chain: A: PDB Molecule:hypoxanthine phosphoribosyltransferase;
PDBTitle: 2.09 angstrom resolution structure of a hypoxanthine-guanine2 phosphoribosyltransferase (hpt-1) from bacillus anthracis str. 'ames3 ancestor' in complex with gmp
16d1j7ja_



99.5 21
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
17c4rhyC_



99.4 20
PDB header:transferase/transferase inhibitor
Chain: C: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase;
PDBTitle: crystal structures of mycobacterium tuberculosis 6-oxopurine2 phosphoribosyltransferase which is a potential target for drug3 development against this disease
18c4lyyA_



99.4 19
PDB header:transferase
Chain: A: PDB Molecule:hypoxanthine phosphoribosyltransferase;
PDBTitle: crystal structure of hypoxanthine phosphoribosyltransferase from2 shewanella pealeana atcc 700345, nysgrc target 029677.
19d1tc1a_



99.4 18
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
20c3o7mD_



99.4 19
PDB header:transferase
Chain: D: PDB Molecule:hypoxanthine phosphoribosyltransferase;
PDBTitle: 1.98 angstrom resolution crystal structure of a hypoxanthine-guanine2 phosphoribosyltransferase (hpt-2) from bacillus anthracis str. 'ames3 ancestor'
21c5t3oB_



not modelled 99.4 24
PDB header:transferase
Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase;
PDBTitle: crystal structure of the phosphorybosylpyrophosphate synthetase ii2 from thermus thermophilus
22c4pfqF_



not modelled 99.4 23
PDB header:transferase
Chain: F: PDB Molecule:hypoxanthine phosphoribosyltransferase;
PDBTitle: crystal structure of hypoxanthine phosphoribosyltransferase from2 brachybacterium faecium dsm 4810, nysgrc target 029763.
23c3lpnB_



not modelled 99.4 23
PDB header:transferase
Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase;
PDBTitle: crystal structure of the phosphoribosylpyrophosphate (prpp) synthetase2 from thermoplasma volcanium in complex with an atp analog (ampcpp).
24d1xtta1



not modelled 99.3 17
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
25d1zn7a1



not modelled 99.3 31
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
26c4rqbB_



not modelled 99.3 17
PDB header:transferase
Chain: B: PDB Molecule:hypoxanthine phosphoribosyltransferase;
PDBTitle: crystal structure of a hypoxanthine phosphoribosyltransferase (target2 id nysgrc-029686) from staphylococcus aureus (tetragonal space group)
27d1z7ga1



not modelled 99.3 25
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
28c4z1oB_



not modelled 99.3 21
PDB header:transferase
Chain: B: PDB Molecule:phosphoribosyltransferase;
PDBTitle: hypoxanthine-guanine-xanthine phosphoribosyltransferase (hgxprt) from2 sulfolobus solfataricus in complex with alpha-3 phosphoribosylpyrophosphoric acid (prpp) and magnesium
29c5zgoB_



not modelled 99.3 19
PDB header:transferase
Chain: B: PDB Molecule:adenine phosphoribosyltransferase;
PDBTitle: crystal structure of aprt2 from thermus thermophilus hb8
30c3dezA_



not modelled 99.3 19
PDB header:transferase
Chain: A: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: crystal structure of orotate phosphoribosyltransferase from2 streptococcus mutans
31c2dy0A_



not modelled 99.2 25
PDB header:transferase
Chain: A: PDB Molecule:adenine phosphoribosyltransferase;
PDBTitle: crystal structure of project jw0458 from escherichia coli
32c4lzaB_



not modelled 99.2 22
PDB header:transferase
Chain: B: PDB Molecule:adenine phosphoribosyltransferase;
PDBTitle: crystal structure of adenine phosphoribosyltransferase from2 thermoanaerobacter pseudethanolicus atcc 33223, nysgrc target 029700.
33c1pzmB_



not modelled 99.2 25
PDB header:transferase
Chain: B: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase;
PDBTitle: crystal structure of hgprt-ase from leishmania tarentolae in complex2 with gmp
34d1g9sa_



not modelled 99.2 18
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
35d1vdma1



not modelled 99.2 33
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
36d1pzma_



not modelled 99.2 21
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
37c3efhB_



not modelled 99.2 16
PDB header:transferase
Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1;
PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1
38c5vogA_



not modelled 99.2 24
PDB header:transferase
Chain: A: PDB Molecule:putative phosphoribosyltransferase;
PDBTitle: crystal structure of a hypothetical protein from neisseria gonorrhoeae2 with bound ppgpp
39d2aeea1



not modelled 99.2 19
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
40d1y0ba1



not modelled 99.1 16
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
41c2c4kD_



not modelled 99.1 20
PDB header:regulatory protein
Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase-associated protein
PDBTitle: crystal structure of human phosphoribosylpyrophosphate synthetase-2 associated protein 39 (pap39)
42c5yw2D_



not modelled 99.1 26
PDB header:transferase
Chain: D: PDB Molecule:adenine phosphoribosyltransferase;
PDBTitle: crystal structure of adenine phosphoribosyltransferase from2 francisella tularensis.
43c5mp7C_



not modelled 99.1 26
PDB header:transferase
Chain: C: PDB Molecule:ribose-phosphate pyrophosphokinase;
PDBTitle: crystal structure of phosphoribosylpyrophosphate synthetase from2 mycobacterium smegmatis
44c5ipfA_



not modelled 99.1 21
PDB header:transferase
Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase (hgprt);
PDBTitle: crystal structure of hypoxanthine-guanine phosphoribosyltransferase2 from schistosoma mansoni in complex with imp
45d1g2qa_



not modelled 99.1 24
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
46d1l1qa_



not modelled 99.1 19
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
47c4trbA_



not modelled 99.1 22
PDB header:transferase
Chain: A: PDB Molecule:purine phosphoribosyltransferase (gpt-1);
PDBTitle: sulfolobus solfataricus adenine phosphoribosyltransferase
48d1vcha1



not modelled 99.1 19
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
49d2c4ka2



not modelled 99.1 22
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosylpyrophosphate synthetase-like
50d1i5ea_



not modelled 99.1 21
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
51c4s2uA_



not modelled 99.1 23
PDB header:transferase
Chain: A: PDB Molecule:ribose-phosphate pyrophosphokinase;
PDBTitle: crystal structure of the phosphorybosylpyrophosphate synthetase from2 e. coli
52d1u9ya2



not modelled 99.1 29
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosylpyrophosphate synthetase-like
53d1w30a_



not modelled 99.0 27
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
54d1p17b_



not modelled 99.0 20
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
55c6nfeB_



not modelled 99.0 27
PDB header:ligase
Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase;
PDBTitle: crystal structure of ribose-phosphate pyrophosphokinase from2 legionella pneumophila with bound amp, adp, and ribose-5-phosphate
56c2ehjA_



not modelled 99.0 24
PDB header:transferase
Chain: A: PDB Molecule:uracil phosphoribosyltransferase;
PDBTitle: structure of uracil phosphoribosyl transferase
57c2wnsB_



not modelled 99.0 19
PDB header:transferase
Chain: B: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: human orotate phosphoribosyltransferase (oprtase) domain of2 uridine 5'-monophosphate synthase (umps) in complex with3 its substrate orotidine 5'-monophosphate (omp)
58c1u9yD_



not modelled 99.0 34
PDB header:transferase
Chain: D: PDB Molecule:ribose-phosphate pyrophosphokinase;
PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii
59d1fsga_



not modelled 99.0 25
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
60c5kapA_



not modelled 99.0 31
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase;
PDBTitle: trypanosome brucei hypoxanthine-guanine phosphoribosyltranferase in2 complex with a 9-(4-(phosphonobutil)hypoxanthine
61d1o5oa_



not modelled 99.0 27
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
62c1dkrB_



not modelled 99.0 22
PDB header:transferase
Chain: B: PDB Molecule:phosphoribosyl pyrophosphate synthetase;
PDBTitle: crystal structures of bacillus subtilis phosphoribosylpyrophosphate2 synthetase: molecular basis of allosteric inhibition and activation.
63c5hkiD_



not modelled 98.9 34
PDB header:transferase
Chain: D: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: crystal structure of mycobacterium tuberculosis h37rv orotate2 phosphoribosyltransferase in complex with fe(iii) dicitrate
64d1a3ca_



not modelled 98.9 31
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
65d1cjba_



not modelled 98.9 24
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
66d1dkua2



not modelled 98.9 23
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosylpyrophosphate synthetase-like
67c1o57A_



not modelled 98.9 23
PDB header:dna binding protein
Chain: A: PDB Molecule:pur operon repressor;
PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis
68c4m0kD_



not modelled 98.9 28
PDB header:transferase
Chain: D: PDB Molecule:adenine phosphoribosyltransferase;
PDBTitle: crystal structure of adenine phosphoribosyltransferase from2 rhodothermus marinus dsm 4252, nysgrc target 029775.
69c4twbB_



not modelled 98.9 19
PDB header:transferase
Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase;
PDBTitle: sulfolobus solfataricus ribose-phosphate pyrophosphokinase
70c3dahB_



not modelled 98.9 30
PDB header:transferase
Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase;
PDBTitle: 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from2 burkholderia pseudomallei
71c4pawA_



not modelled 98.9 18
PDB header:transferase
Chain: A: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: structure of hypothetical protein hp1257.
72d2igba1



not modelled 98.9 27
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
73c2p1zA_



not modelled 98.9 37
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosyltransferase;
PDBTitle: crystal structure of phosphoribosyltransferase from corynebacterium2 diphtheriae
74c5e38D_



not modelled 98.8 23
PDB header:transferase
Chain: D: PDB Molecule:uracil phosphoribosyltransferase;
PDBTitle: structural basis of mapping the spontaneous mutations with 5-2 flourouracil in uracil phosphoribosyltransferase from mycobacterium3 tuberculosis
75d1ufra_



not modelled 98.8 36
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
76c5vn4A_



not modelled 98.8 21
PDB header:transferase
Chain: A: PDB Molecule:adenine phosphoribosyltransferase, putative;
PDBTitle: crystal structure of adenine phosphoribosyl transferase from2 trypanosoma brucei in complex with amp, pyrophosphate, and ribose-5-3 phosphate
77d1o57a2



not modelled 98.8 21
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
78c2yzkC_



not modelled 98.7 33
PDB header:transferase
Chain: C: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: crystal structure of orotate phosphoribosyltransferase from2 aeropyrum pernix
79c6apsA_



not modelled 98.7 21
PDB header:transferase
Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase;
PDBTitle: trypanosoma brucei hypoxanthine guanine phosphoribosyltransferase in2 complex with [(2-((guanine-9h-yl)methyl)propane-1,3 diyl)bis(oxy)3 ]bis(methylene))diphosphonic acid
80c3m3hA_



not modelled 98.6 22
PDB header:transferase
Chain: A: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: 1.75 angstrom resolution crystal structure of an orotate2 phosphoribosyltransferase from bacillus anthracis str. 'ames3 ancestor'
81d1mzva_



not modelled 98.6 20
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
82d2g5gx1



not modelled 98.6 21
Fold:EreA/ChaN-like
Superfamily:EreA/ChaN-like
Family:ChaN-like
83c2e55D_



not modelled 98.6 20
PDB header:transferase
Chain: D: PDB Molecule:uracil phosphoribosyltransferase;
PDBTitle: structure of aq2163 protein from aquifex aeolicus
84d1qb7a_



not modelled 98.6 17
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
85c6ar9A_



not modelled 98.5 26
PDB header:transferase
Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase, putative;
PDBTitle: crystal structure of hypoxanthine-guanine-xanthine2 phosphorybosyltranferase in complex with [(2-{[2-(2-amino-6-oxo-1,6-3 dihydro-9h-purin-9-yl)ethyl][(e)-2-phosphonoethenyl]amino}ethoxy)4 methyl]phosphonic acid
86d1lh0a_



not modelled 98.5 28
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
87d1v9sa1



not modelled 98.5 22
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
88c2jbhA_



not modelled 98.5 24
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosyltransferase domain-containing protein 1;
PDBTitle: human phosphoribosyl transferase domain containing 1
89c3mjdA_



not modelled 98.4 24
PDB header:transferase
Chain: A: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: 1.9 angstrom crystal structure of orotate phosphoribosyltransferase2 (pyre) francisella tularensis.
90d1nula_



not modelled 98.4 24
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
91c3n2lA_



not modelled 98.3 24
PDB header:transferase
Chain: A: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: 2.1 angstrom resolution crystal structure of an orotate2 phosphoribosyltransferase (pyre) from vibrio cholerae o1 biovar eltor3 str. n16961
92c2przB_



not modelled 98.2 19
PDB header:transferase
Chain: B: PDB Molecule:orotate phosphoribosyltransferase 1;
PDBTitle: s. cerevisiae orotate phosphoribosyltransferase complexed with omp
93c3qw4B_



not modelled 98.1 25
PDB header:transferase, lyase
Chain: B: PDB Molecule:ump synthase;
PDBTitle: structure of leishmania donovani ump synthase
94c2jkzB_



not modelled 98.1 25
PDB header:transferase
Chain: B: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase;
PDBTitle: saccharomyces cerevisiae hypoxanthine-guanine2 phosphoribosyltransferase in complex with gmp (guanosine 5'-3 monophosphate) (orthorhombic crystal form)
95d1bd3a_



not modelled 98.0 15
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
96c3dmpD_



not modelled 97.8 24
PDB header:transferase
Chain: D: PDB Molecule:uracil phosphoribosyltransferase;
PDBTitle: 2.6 a crystal structure of uracil phosphoribosyltransferase from2 burkholderia pseudomallei
97d1dqna_



not modelled 97.7 20
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
98c4fymA_



not modelled 97.3 21
PDB header:transferase
Chain: A: PDB Molecule:orotate phosphoribosyltransferase;
PDBTitle: crystal structure of plasmodium falciparum orotate2 phosphoribosyltransferase
99d2c4ka1



not modelled 92.8 21
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosylpyrophosphate synthetase-like
100d1dkua1



not modelled 92.6 22
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosylpyrophosphate synthetase-like
101d1u9ya1



not modelled 90.9 15
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosylpyrophosphate synthetase-like
102c2ynmC_



not modelled 90.2 18
PDB header:oxidoreductase
Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n;
PDBTitle: structure of the adpxalf3-stabilized transition state of the2 nitrogenase-like dark-operative protochlorophyllide oxidoreductase3 complex from prochlorococcus marinus with its substrate4 protochlorophyllide a
103d2ebfx2



not modelled 89.3 16
Fold:EreA/ChaN-like
Superfamily:EreA/ChaN-like
Family:PMT domain-like
104c3pdiG_



not modelled 89.2 13
PDB header:protein binding
Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife;
PDBTitle: precursor bound nifen
105d1vi2a1



not modelled 85.9 20
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
106c1e8cB_



not modelled 84.7 17
PDB header:ligase
Chain: B: PDB Molecule:udp-n-acetylmuramoylalanyl-d-glutamate--2,6-diaminopimelate
PDBTitle: structure of mure the udp-n-acetylmuramyl tripeptide synthetase from2 e. coli
107c1j6uA_



not modelled 81.0 15
PDB header:ligase
Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc;
PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase murc (tm0231)2 from thermotoga maritima at 2.3 a resolution
108d1snna_



not modelled 81.0 17
Fold:YrdC/RibB
Superfamily:YrdC/RibB
Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
109c2gn0A_



not modelled 80.9 16
PDB header:lyase
Chain: A: PDB Molecule:threonine dehydratase catabolic;
PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation)
110c2xjaD_



not modelled 80.8 15
PDB header:ligase
Chain: D: PDB Molecule:udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2,6-
PDBTitle: structure of mure from m.tuberculosis with dipeptide and adp
111c4ffjA_



not modelled 78.9 22
PDB header:lyase
Chain: A: PDB Molecule:riboflavin biosynthesis protein ribba;
PDBTitle: the crystal structure of spdhbps from s.pneumoniae
112d1tdja1



not modelled 78.5 12
Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
113d1m1na_



not modelled 77.1 13
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
114c4cvkA_



not modelled 76.6 17
PDB header:ligase
Chain: A: PDB Molecule:udp-n-acetylmuramoyl-tripeptide--d-alanyl-d-alanine
PDBTitle: pamurf in complex with udp-murnac-tripeptide (mdap)
115c6nbgD_



not modelled 75.6 22
PDB header:unknown function
Chain: D: PDB Molecule:glucosamine-6-phosphate deaminase;
PDBTitle: 2.05 angstrom resolution crystal structure of hypothetical protein2 kp1_5497 from klebsiella pneumoniae.
116d1g57a_



not modelled 75.0 18
Fold:YrdC/RibB
Superfamily:YrdC/RibB
Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
117d1k4ia_



not modelled 74.5 21
Fold:YrdC/RibB
Superfamily:YrdC/RibB
Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
118c6mgbA_



not modelled 74.2 17
PDB header:transferase
Chain: A: PDB Molecule:capsular polysaccharide export system protein kpsc;
PDBTitle: thermosulfurimonas dismutans kpsc, beta kdo 2,4 transferase
119c5cvcB_



not modelled 73.5 18
PDB header:isomerase
Chain: B: PDB Molecule:serine racemase;
PDBTitle: structure of maize serine racemase
120c1tdjA_



not modelled 72.2 14
PDB header:allostery
Chain: A: PDB Molecule:biosynthetic threonine deaminase;
PDBTitle: threonine deaminase (biosynthetic) from e. coli

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite