Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2046_(lppI)_2291277_2291933
DateMon Aug 5 13:25:15 BST 2019
Unique Job ID6361f08b3389482b
SequenceMRIAALVAVS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:21.477 Y:35.519 Z:24.347
Model (left) based on template c4b03D_
Top template information
PDB header:virus
Chain: D: PDB Molecule:dengue virus 1 prm protein;
PDBTitle: 6a electron cryomicroscopy structure of immature dengue virus serotype2 1
Confidence and coverage
Confidence: 70.2% Coverage: 17%
36 residues ( 17% of your sequence) have been modelled with 70.2% confidence by the single highest scoring template.
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Warning: 51% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4b03D_



70.2 31
PDB header:virus
Chain: D: PDB Molecule:dengue virus 1 prm protein;
PDBTitle: 6a electron cryomicroscopy structure of immature dengue virus serotype2 1
2c3c6rE_



61.3 18
PDB header:virus
Chain: E: PDB Molecule:peptide pr;
PDBTitle: low ph immature dengue virus
3c3c6eC_



61.2 18
PDB header:viral protein
Chain: C: PDB Molecule:prm;
PDBTitle: crystal structure of the precursor membrane protein- envelope protein2 heterodimer from the dengue 2 virus at neutral ph
4c3ixxE_



56.1 18
PDB header:virus
Chain: E: PDB Molecule:peptide pr;
PDBTitle: the pseudo-atomic structure of west nile immature virus in complex2 with fab fragments of the anti-fusion loop antibody e53
5c4edqA_



23.7 24
PDB header:transport protein/contractile protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein,myosin-binding protein
PDBTitle: mbp-fusion protein of myosin-binding protein c residues 149-269
6c6rdu9_



23.6 30
PDB header:proton transport
Chain: 9: PDB Molecule:asa-9: polytomella f-atp synthase associated subunit 9;
PDBTitle: cryo-em structure of polytomella f-atp synthase, rotary substate 1e,2 monomer-masked refinement
7d2nt0a1



17.6 25
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:Composite domain of glycosyl hydrolase families 5, 30, 39 and 51
8c3uotB_



12.0 22
PDB header:cell cycle
Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1;
PDBTitle: crystal structure of mdc1 fha domain in complex with a phosphorylated2 peptide from the mdc1 n-terminus
9c5o60W_



10.9 12
PDB header:ribosome
Chain: W: PDB Molecule:50s ribosomal protein l25;
PDBTitle: structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
10c5umwA_



10.1 39
PDB header:tiancimycin-binding protein
Chain: A: PDB Molecule:glyoxalase/bleomycin resisance protein/dioxygenase;
PDBTitle: crystal structure of tnms2, an antibiotic binding protein from2 streptomyces sp. cb03234
11d2ea9a1



9.1 27
Fold:Profilin-like
Superfamily:YeeU-like
Family:YagB/YeeU/YfjZ-like
12d1feua_



8.9 21
Fold:Ribosomal protein L25-like
Superfamily:Ribosomal protein L25-like
Family:Ribosomal protein L25-like
13d2h28a1



8.2 20
Fold:Profilin-like
Superfamily:YeeU-like
Family:YagB/YeeU/YfjZ-like
14c4lqbA_



8.1 11
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein kfla3161
15d2inwa1



7.6 27
Fold:Profilin-like
Superfamily:YeeU-like
Family:YagB/YeeU/YfjZ-like
16c6ou9A_



7.5 19
PDB header:virus like particle
Chain: A: PDB Molecule:major capsid protein;
PDBTitle: asymmetric focused reconstruction of human norovirus gi.7 houston2 strain vlp asymmetric unit in t=3 symmetry
17c2kieA_



6.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1;
PDBTitle: a ph domain within ocrl bridges clathrin mediated membrane2 trafficking to phosphoinositide metabolis
18c6nggB_



6.3 50
PDB header:immune system
Chain: B: PDB Molecule:cd160 antigen;
PDBTitle: crystal structure of human cd160 v58m mutant
19c2be1A_



6.1 16
PDB header:transcription
Chain: A: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1;
PDBTitle: structure of the compact lumenal domain of yeast ire1
20c2ml7A_



5.7 35
PDB header:unknown function
Chain: A: PDB Molecule:specific abundant protein 3;
PDBTitle: ginsentides: characterization, structure and application of a new2 class of highly stable cystine knot peptides in ginseng
21c4hc5A_



not modelled 5.6 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:glyoxalase/bleomycin resistance protein/dioxygenase;
PDBTitle: crystal structure of member of glyoxalase/bleomycin resistance2 protein/dioxygenase superfamily from sphaerobacter thermophilus dsm3 20745
22c3mwdA_



not modelled 5.4 7
PDB header:transferase
Chain: A: PDB Molecule:atp-citrate synthase;
PDBTitle: truncated human atp-citrate lyase with citrate bound
23c5f3jD_



not modelled 5.4 8
PDB header:immune system
Chain: D: PDB Molecule:antibody 2d10 single chain variable fragment;
PDBTitle: crystal structure of dbp in complex with inhibitory monoclonal2 antibody 2d10
24c5jxpA_



not modelled 5.3 19
PDB header:hydrolase
Chain: A: PDB Molecule:asp/glu-specific dipeptidyl-peptidase;
PDBTitle: crystal structure of porphyromonas endodontalis dpp11 in alternate2 conformation

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