Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2049c_(-)_2307301_2307525
DateMon Aug 5 13:25:16 BST 2019
Unique Job ID6be33edaef7d2e81
SequenceMLTRGEVRAL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:17.993 Y:20.668 Z:39.714
Model (left) based on template d1st6a3
Top template information
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
Confidence and coverage
Confidence: 31.4% Coverage: 38%
28 residues ( 38% of your sequence) have been modelled with 31.4% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1st6a3



31.4 21
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
2c5ytpA_



30.7 44
PDB header:dna binding protein
Chain: A: PDB Molecule:ttha0139;
PDBTitle: crystal structure of ttha0139 l34a from thermus thermophilus hb8
3d2a6qb1



19.7 21
Fold:YefM-like
Superfamily:YefM-like
Family:YefM-like
4d1n26a1



16.7 41
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
5d1st6a5



16.0 20
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
6c3g5rA_



15.0 41
PDB header:transferase
Chain: A: PDB Molecule:methylenetetrahydrofolate--trna-(uracil-5-)-
PDBTitle: crystal structure of thermus thermophilus trmfo in complex with2 tetrahydrofolate
7d1st6a4



13.6 18
Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
8c3g5oA_



13.4 24
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:uncharacterized protein rv2865;
PDBTitle: the crystal structure of the toxin-antitoxin complex relbe2 (rv2865-2 2866) from mycobacterium tuberculosis
9c3tweA_



12.6 29
PDB header:unknown function
Chain: A: PDB Molecule:alpha4h;
PDBTitle: crystal structure of the de novo designed peptide alpha4h
10c2le7A_



12.3 44
PDB header:transport protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2;
PDBTitle: solution nmr structure of the s4s5 linker of herg potassium channel
11c3tweB_



12.3 29
PDB header:unknown function
Chain: B: PDB Molecule:alpha4h;
PDBTitle: crystal structure of the de novo designed peptide alpha4h
12c6q5sB_



11.9 32
PDB header:de novo protein
Chain: B: PDB Molecule:apcc-tet;
PDBTitle: crystal structure of a de novo designed antiparallel four-helix coiled2 coil apcc-tet
13c6q5sC_



11.9 32
PDB header:de novo protein
Chain: C: PDB Molecule:apcc-tet;
PDBTitle: crystal structure of a de novo designed antiparallel four-helix coiled2 coil apcc-tet
14c6q5sD_



11.9 32
PDB header:de novo protein
Chain: D: PDB Molecule:apcc-tet;
PDBTitle: crystal structure of a de novo designed antiparallel four-helix coiled2 coil apcc-tet
15c6q5sA_



11.9 32
PDB header:de novo protein
Chain: A: PDB Molecule:apcc-tet;
PDBTitle: crystal structure of a de novo designed antiparallel four-helix coiled2 coil apcc-tet
16c3d55A_



9.6 35
PDB header:toxin inhibitor
Chain: A: PDB Molecule:uncharacterized protein rv3357/mt3465;
PDBTitle: crystal structure of m. tuberculosis yefm antitoxin
17c3oeiB_



9.1 48
PDB header:toxin, protein binding
Chain: B: PDB Molecule:relj (antitoxin rv3357);
PDBTitle: crystal structure of mycobacterium tuberculosis reljk (rv3357-rv3358-2 relbe3)
18c2vs0B_



8.9 8
PDB header:cell invasion
Chain: B: PDB Molecule:virulence factor esxa;
PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa
19d2a6qa1



8.1 23
Fold:YefM-like
Superfamily:YefM-like
Family:YefM-like
20c2lq0A_



8.0 63
PDB header:antifreeze protein
Chain: A: PDB Molecule:de novo designed antifreeze peptide 1m;
PDBTitle: solution structure of de novo designed antifreeze peptide 1m
21c6g1qA_



not modelled 7.5 7
PDB header:hydrolase
Chain: A: PDB Molecule:adp-ribosylhydrolase like 2;
PDBTitle: adp-ribosylserine hydrolase arh3 of latimeria chalumnae in complex2 with adp-ribose
22c1aq5C_



not modelled 7.1 15
PDB header:coiled-coil
Chain: C: PDB Molecule:cartilage matrix protein;
PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures
23c1aq5B_



not modelled 7.1 15
PDB header:coiled-coil
Chain: B: PDB Molecule:cartilage matrix protein;
PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures
24c5y02D_



not modelled 6.8 4
PDB header:lyase
Chain: D: PDB Molecule:hydroxynitrile lyase;
PDBTitle: c-terminal peptide depleted mutant of hydroxynitrile lyase from2 passiflora edulis (pehnl) bound with (r)-mandelonitrile
25c1dmlH_



not modelled 6.7 40
PDB header:dna binding protein/transferase
Chain: H: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of herpes simplex ul42 bound to the c-terminus of2 hsv pol
26c1dmlF_



not modelled 6.7 40
PDB header:dna binding protein/transferase
Chain: F: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of herpes simplex ul42 bound to the c-terminus of2 hsv pol
27c1dmlD_



not modelled 6.6 40
PDB header:dna binding protein/transferase
Chain: D: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of herpes simplex ul42 bound to the c-terminus of2 hsv pol
28c1dmlB_



not modelled 6.6 40
PDB header:dna binding protein/transferase
Chain: B: PDB Molecule:dna polymerase;
PDBTitle: crystal structure of herpes simplex ul42 bound to the c-terminus of2 hsv pol
29c3kdqB_



not modelled 6.3 26
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized conserved protein;
PDBTitle: crystal structure of a functionally unknown conserved2 protein from corynebacterium diphtheriae.
30c5j0hA_



not modelled 6.0 38
PDB header:de novo protein
Chain: A: PDB Molecule:design construct 2l6hc3_13;
PDBTitle: de novo design of protein homo-oligomers with modular hydrogen bond2 network-mediated specificity
31c5vr2A_



not modelled 5.9 32
PDB header:signaling protein
Chain: A: PDB Molecule:myocilin;
PDBTitle: mouse myocilin leucine zipper c-terminal 7 heptad repeat
32c5uupB_



not modelled 5.9 55
PDB header:apoptosis
Chain: B: PDB Molecule:bfl-1-specific selected peptide;
PDBTitle: human bfl-1 covalently cross-linked to an electrophilic variant of a2 bfl-1-specific selected peptide
33d1rutx3



not modelled 5.9 43
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
34c4rlrA_



not modelled 5.8 50
PDB header:electron transport
Chain: A: PDB Molecule:cytochrome c, 1 heme-binding site;
PDBTitle: structure of monoheme cytochrome pcch from geobacter sulfurreducens
35d1u61a_



not modelled 5.8 31
Fold:RNase III domain-like
Superfamily:RNase III domain-like
Family:RNase III catalytic domain-like
36d1yaro1



not modelled 5.6 30
Fold:Four-helical up-and-down bundle
Superfamily:Proteasome activator
Family:Proteasome activator
37c3zbhC_



not modelled 5.5 12
PDB header:unknown function
Chain: C: PDB Molecule:esxa;
PDBTitle: geobacillus thermodenitrificans esxa crystal form i
38d1e52a_



not modelled 5.2 36
Fold:Long alpha-hairpin
Superfamily:C-terminal UvrC-binding domain of UvrB
Family:C-terminal UvrC-binding domain of UvrB
39c2hw2A_



not modelled 5.1 20
PDB header:transferase
Chain: A: PDB Molecule:rifampin adp-ribosyl transferase;
PDBTitle: crystal structure of rifampin adp-ribosyl transferase in complex with2 rifampin

Binding site prediction 

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