Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2063_(-)_2320839_2321072
DateMon Aug 5 13:25:17 BST 2019
Unique Job IDf184e6a0ff244b3d
SequenceMSTSTTIRVS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.008 Y:43.003 Z:37.199
Model (left) based on template c6a6xC_
Top template information
PDB header:toxin
Chain: C: PDB Molecule:antitoxin maze7;
PDBTitle: the crystal structure of the mtb maze-mazf-mt9 complex
Confidence and coverage
Confidence:100.0% Coverage: 97%
75 residues ( 97% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6a6xC_
100.0 100
PDB header:toxin
Chain: C: PDB Molecule:antitoxin maze7;
PDBTitle: the crystal structure of the mtb maze-mazf-mt9 complex
2d2cpga_
74.6 36
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:CopG-like
3c1ea4K_
74.6 36
PDB header:gene regulation/dna
Chain: K: PDB Molecule:transcriptional repressor copg;
PDBTitle: transcriptional repressor copg/22bp dsdna complex
4c5yrzC_
47.2 20
PDB header:antitoxin/hydrolase
Chain: C: PDB Molecule:hicb;
PDBTitle: toxin-antitoxin complex from streptococcus pneumoniae
5c2k29A_
46.3 20
PDB header:transcription
Chain: A: PDB Molecule:antitoxin relb;
PDBTitle: structure of the dbd domain of e. coli antitoxin relb
6d1q9ja2
40.6 26
Fold:CoA-dependent acyltransferases
Superfamily:CoA-dependent acyltransferases
Family:NRPS condensation domain (amide synthase)
7c6qeqD_
39.6 13
PDB header:dna binding protein
Chain: D: PDB Molecule:pcff;
PDBTitle: pcff from enterococcus faecalis pcf10
8c2mdvB_
39.3 36
PDB header:de novo protein
Chain: B: PDB Molecule:designed protein;
PDBTitle: nmr structure of beta alpha alpha 38
9c4fxeB_
39.3 18
PDB header:toxin/toxin inhibitor
Chain: B: PDB Molecule:antitoxin relb;
PDBTitle: crystal structure of the intact e. coli relbe toxin-antitoxin complex
10c3kk4B_
31.9 25
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein bp1543;
PDBTitle: uncharacterized protein bp1543 from bordetella pertussis tohama i
11c6ajnF_
31.8 18
PDB header:toxin
Chain: F: PDB Molecule:duf1778 domain-containing protein;
PDBTitle: crystal structure of atatr bound with accoa
12c6gtsC_
29.3 18
PDB header:transcription
Chain: C: PDB Molecule:duf1778 domain-containing protein;
PDBTitle: structure of the atat-atar complex bound dna
13c3qoqC_
26.5 25
PDB header:transcription/dna
Chain: C: PDB Molecule:alginate and motility regulator z;
PDBTitle: crystal structure of the transcription factor amrz in complex with the2 18 base pair amrz1 binding site
14c4q2uM_
26.1 16
PDB header:toxin/toxin repressor
Chain: M: PDB Molecule:antitoxin dinj;
PDBTitle: crystal structure of the e. coli dinj-yafq toxin-antitoxin complex
15c6g1nB_
24.5 18
PDB header:antitoxin
Chain: B: PDB Molecule:antitoxin hicb;
PDBTitle: crystal structure of the burkholderia pseudomallei antitoxin hicb
16c4d8jD_
22.4 33
PDB header:dna binding protein
Chain: D: PDB Molecule:macrodomain ter protein;
PDBTitle: structure of e. coli matp-mats complex
17d1y9ba1
18.1 32
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:VCA0319-like
18d1b3qa1
15.4 32
Fold:ROP-like
Superfamily:Homodimeric domain of signal transducing histidine kinase
Family:Homodimeric domain of signal transducing histidine kinase
19c1u9pA_
15.3 25
PDB header:unknown function
Chain: A: PDB Molecule:parc;
PDBTitle: permuted single-chain arc
20d1mnta_
13.9 29
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Arc/Mnt-like phage repressors
21d1gyza_
not modelled 13.3 27
Fold:PABP domain-like
Superfamily:Ribosomal protein L20
Family:Ribosomal protein L20
22c4hv0B_
not modelled 12.9 24
PDB header:transcription, viral protein
Chain: B: PDB Molecule:avtr;
PDBTitle: structure and function of avtr, a novel transcriptional regulator from2 a hyperthermophilic archaeal lipothrixvirus
23c2k5jB_
not modelled 12.6 21
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein yiif;
PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1
24c4jvsA_
not modelled 12.0 35
PDB header:hydrolase activator/protein transport
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of lepb gap domain from legionella drancourtii in2 complex with rab1-gdp and alf3
25c4p7dA_
not modelled 9.3 18
PDB header:toxin
Chain: A: PDB Molecule:antitoxin hicb3;
PDBTitle: antitoxin hicb3 crystal structure
26c2rocB_
not modelled 9.3 43
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-binding component 3;
PDBTitle: solution structure of mcl-1 complexed with puma
27c4go1A_
not modelled 8.7 22
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator lsrr;
PDBTitle: crystal structure of full length transcription repressor lsrr from e.2 coli.
28c5uulB_
not modelled 8.2 43
PDB header:apoptosis
Chain: B: PDB Molecule:bcl-2-binding component 3;
PDBTitle: human bfl-1 in complex with puma bh3
29d2hsga1
not modelled 8.1 23
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
30d2bsqe1
not modelled 7.2 17
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Trafficking protein A-like
31c2h1oH_
not modelled 6.9 17
PDB header:gene regulation/dna complex
Chain: H: PDB Molecule:trafficking protein a;
PDBTitle: structure of fitab bound to ir36 dna fragment
32c3fshC_
not modelled 6.3 47
PDB header:ligase
Chain: C: PDB Molecule:autocrine motility factor receptor, isoform 2;
PDBTitle: crystal structure of the ubiquitin conjugating enzyme2 ube2g2 bound to the g2br domain of ubiquitin ligase gp78
33c5losA_
not modelled 6.1 53
PDB header:metal binding protein
Chain: A: PDB Molecule:piin_05872;
PDBTitle: piriformospora indica piin_05872
34c5b83B_
not modelled 6.1 50
PDB header:signaling protein
Chain: B: PDB Molecule:optineurin;
PDBTitle: crystal structure of optineurin uban in complex with linear ubiquitin
35c5b83C_
not modelled 5.6 50
PDB header:signaling protein
Chain: C: PDB Molecule:optineurin;
PDBTitle: crystal structure of optineurin uban in complex with linear ubiquitin
36d1iyjb2
not modelled 5.4 86
Fold:BRCA2 tower domain
Superfamily:BRCA2 tower domain
Family:BRCA2 tower domain
37c2m04B_
not modelled 5.4 43
PDB header:apoptosis/protein binding
Chain: B: PDB Molecule:bcl-2-binding component 3;
PDBTitle: solution structure of bcl-xl in complex with puma bh3 peptide
38d2outa1
not modelled 5.3 54
Fold:LEM/SAP HeH motif
Superfamily:Rho N-terminal domain-like
Family:YqbF C-terminal domain-like
39d1uxca_
not modelled 5.2 39
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator

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