Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2063A_(RVBD2063A)_2321065_2321475
DateMon Aug 5 13:25:17 BST 2019
Unique Job ID3abb3586e299ebad
SequenceLAEPRRGDLW ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.878 Y:45.005 Z:30.254
Model (left) based on template c5wygC_
Top template information
PDB header:hydrolase
Chain: C: PDB Molecule:probable endoribonuclease mazf7;
PDBTitle: the crystal structure of the apo form of mtb mazf
Confidence and coverage
Confidence:100.0% Coverage: 78%
106 residues ( 78% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5wygC_



100.0 100
PDB header:hydrolase
Chain: C: PDB Molecule:probable endoribonuclease mazf7;
PDBTitle: the crystal structure of the apo form of mtb mazf
2c4mzpC_



100.0 27
PDB header:hydrolase
Chain: C: PDB Molecule:mazf mrna interferase;
PDBTitle: mazf from s. aureus crystal form iii, c2221, 2.7 a
3d1ne8a_



99.9 23
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:Kid/PemK
4c5hjzA_



99.9 32
PDB header:hydrolase/rna
Chain: A: PDB Molecule:endoribonuclease mazf9;
PDBTitle: structure of m. tuberculosis mazf-mt1 (rv2801c) in complex with rna
5c5xe3B_



99.9 26
PDB header:hydrolase/antitoxin
Chain: B: PDB Molecule:endoribonuclease mazf4;
PDBTitle: endoribonuclease in complex with its cognate antitoxin from2 mycobacterial species
6d1m1fa_



99.9 25
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:Kid/PemK
7d1ub4a_



99.9 29
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:Kid/PemK
8c5hk3B_



99.9 19
PDB header:hydrolase/dna
Chain: B: PDB Molecule:endoribonuclease mazf6;
PDBTitle: crystal structure of m. tuberculosis mazf-mt3 t52d-f62d mutant in2 complex with dna
9c5ccaA_



99.8 17
PDB header:hydrolase
Chain: A: PDB Molecule:endoribonuclease mazf3;
PDBTitle: crystal structure of mtb toxin
10c3jrzA_



95.1 17
PDB header:toxin
Chain: A: PDB Molecule:ccdb;
PDBTitle: ccdbvfi-formii-ph5.6
11d3vuba_



93.0 18
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:CcdB
12c5ikjA_



43.1 17
PDB header:transcription
Chain: A: PDB Molecule:cryptic loci regulator 2;
PDBTitle: structure of clr2 bound to the clr1 c-terminus
13c4ijrA_



37.6 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-arabinose dehydrogenase [nad(p)+] heavy chain;
PDBTitle: crystal structure of saccharomyces cerevisiae arabinose dehydrogenase2 ara1 complexed with nadph
14c4bedA_



33.6 21
PDB header:oxygen transport
Chain: A: PDB Molecule:hemocyanin klh1;
PDBTitle: keyhole limpet hemocyanin (klh): 9a cryoem structure and molecular2 model of the klh1 didecamer reveal the interfaces and intricate3 topology of the 160 functional units
15c2l89A_



32.6 16
PDB header:protein binding
Chain: A: PDB Molecule:pwwp domain-containing protein 1;
PDBTitle: solution structure of pdp1 pwwp domain reveals its unique binding2 sites for methylated h4k20 and dna
16c4me8A_



23.0 20
PDB header:hydrolase
Chain: A: PDB Molecule:signal peptidase i;
PDBTitle: crystal structure of a signal peptidase i (ef3073) from enterococcus2 faecalis v583 at 2.27 a resolution
17c3llrA_



15.0 17
PDB header:transferase
Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 3a;
PDBTitle: crystal structure of the pwwp domain of human dna (cytosine-5-)-2 methyltransferase 3 alpha
18c5vc8B_



14.4 12
PDB header:dna binding protein
Chain: B: PDB Molecule:histone-lysine n-methyltransferase nsd2;
PDBTitle: crystal structure of the whsc1 pwwp1 domain
19c2zkrt_



13.8 21
PDB header:ribosomal protein/rna
Chain: T: PDB Molecule:rna expansion segment es39 part iii;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
20c3mxuA_



12.5 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:glycine cleavage system h protein;
PDBTitle: crystal structure of glycine cleavage system protein h from bartonella2 henselae
21d1h3za_



not modelled 12.1 14
Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:PWWP domain
22d1okja2



not modelled 11.7 13
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:YeaZ-like
23c4m8bR_



not modelled 11.6 21
PDB header:transcription/dna
Chain: R: PDB Molecule:yhr177w;
PDBTitle: fungal protein
24c4es2A_



not modelled 10.8 12
PDB header:hydrolase
Chain: A: PDB Molecule:bh0342 protein;
PDBTitle: double-stranded endonuclease activity in b. halodurans clustered2 regularly interspaced short palindromic repeats (crispr)-associated3 cas2 protein
25d1rz4a1



not modelled 10.6 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain
26c6n1bA_



not modelled 10.6 14
PDB header:hydrolase
Chain: A: PDB Molecule:carbohydrate-binding protein;
PDBTitle: crystal structure of an n-acetylgalactosamine deacetylase from f.2 plautii in complex with blood group b trisaccharide
27d1pz1a_



not modelled 10.5 31
Fold:TIM beta/alpha-barrel
Superfamily:NAD(P)-linked oxidoreductase
Family:Aldo-keto reductases (NADP)
28c4qtkB_



not modelled 10.1 57
PDB header:transcription/dna
Chain: B: PDB Molecule:white-opaque regulator 1;
PDBTitle: complex of wopr domain of wor1 in candida albicans with the 17bp dsdna
29c3bcxA_



not modelled 9.0 14
PDB header:transferase
Chain: A: PDB Molecule:cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3-dehydrase;
PDBTitle: e1 dehydrase
30c2jysA_



not modelled 8.7 10
PDB header:hydrolase
Chain: A: PDB Molecule:protease/reverse transcriptase;
PDBTitle: solution structure of simian foamy virus (mac) protease
31d1onla_



not modelled 8.4 22
Fold:Barrel-sandwich hybrid
Superfamily:Single hybrid motif
Family:Biotinyl/lipoyl-carrier proteins and domains
32d1zaka2



not modelled 8.1 11
Fold:Rubredoxin-like
Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain
Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
33d1cxqa_



not modelled 8.1 10
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
34d3e9va1



not modelled 7.9 21
Fold:BTG domain-like
Superfamily:BTG domain-like
Family:BTG domain-like
35c2edgA_



not modelled 7.8 16
PDB header:biosynthetic protein
Chain: A: PDB Molecule:glycine cleavage system h protein;
PDBTitle: solution structure of the gcv_h domain from mouse glycine
36c5zc2B_



not modelled 7.6 14
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
37d1b12a_



not modelled 7.2 21
Fold:LexA/Signal peptidase
Superfamily:LexA/Signal peptidase
Family:Type 1 signal peptidase
38c2gya3_



not modelled 7.2 13
PDB header:ribosome
Chain: 3: PDB Molecule:50s ribosomal protein l7/l12;
PDBTitle: structure of the 50s subunit of a pre-translocational e. coli ribosome2 obtained by fitting atomic models for rna and protein components into3 cryo-em map emd-1056
39c2jnsA_



not modelled 6.7 8
PDB header:unknown function
Chain: A: PDB Molecule:bromodomain-containing protein 4;
PDBTitle: solution structure of the bromodomain-containing protein 42 et domain
40c3iftA_



not modelled 5.9 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:glycine cleavage system h protein;
PDBTitle: crystal structure of glycine cleavage system protein h from2 mycobacterium tuberculosis, using x-rays from the compact light3 source.
41d2daqa1



not modelled 5.9 17
Fold:SH3-like barrel
Superfamily:Tudor/PWWP/MBT
Family:PWWP domain
42d1cooa_



not modelled 5.9 13
Fold:SAM domain-like
Superfamily:C-terminal domain of RNA polymerase alpha subunit
Family:C-terminal domain of RNA polymerase alpha subunit
43c5v1eA_



not modelled 5.8 50
PDB header:antimicrobial protein
Chain: A: PDB Molecule:guavanin 2;
PDBTitle: suboptimization of a glycine rich peptide allows the combinatorial2 space exploration for designing novel antimicrobial peptides
44c3w1hB_



not modelled 5.7 14
PDB header:transferase
Chain: B: PDB Molecule:l-seryl-trna(sec) selenium transferase;
PDBTitle: crystal structure of the selenocysteine synthase sela from aquifex2 aeolicus
45c1zx4B_



not modelled 5.3 15
PDB header:cell cycle
Chain: B: PDB Molecule:plasmid partition par b protein;
PDBTitle: structure of parb bound to dna

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