Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2093c_(tatC)_2352111_2353037
DateMon Aug 5 13:25:21 BST 2019
Unique Job ID9267a1eed26c9e9d
SequenceVRAAGLLKRL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:58.807 Y:58.066 Z:47.275
Model (left) based on template c4b4aA_
Top template information
PDB header:transport protein
Chain: A: PDB Molecule:sec-independent protein translocase protein tatc;
PDBTitle: structure of the tatc core of the twin arginine protein2 translocation system
Confidence and coverage
Confidence:100.0% Coverage: 72%
221 residues ( 72% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4b4aA_



100.0 35
PDB header:transport protein
Chain: A: PDB Molecule:sec-independent protein translocase protein tatc;
PDBTitle: structure of the tatc core of the twin arginine protein2 translocation system
2d1v54l_



41.9 22
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Family:Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
3c6c08C_



41.4 11
PDB header:membrane protein
Chain: C: PDB Molecule:sodium-coupled neutral amino acid transporter 9;
PDBTitle: zebrafish slc38a9 with arginine bound in the cytosol open state
4c2y69Y_



39.2 22
PDB header:electron transport
Chain: Y: PDB Molecule:cytochrome c oxidase subunit 7c;
PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular oxygen
5c2mdfA_



34.5 29
PDB header:proton transport
Chain: A: PDB Molecule:sodium/hydrogen exchanger 1;
PDBTitle: nmr structure of a two-transmembrane segment tm vi-vii of nhe1
6c6ivuB_



33.8 15
PDB header:transcription
Chain: B: PDB Molecule:rna polymerase sigma factor sigi1;
PDBTitle: solution structure of the sigma-anti-sigma factor complex rsgi1n-2 sigi1c from clostridium thermocellum
7c2rddB_



31.8 16
PDB header:membrane protein/transport protein
Chain: B: PDB Molecule:upf0092 membrane protein yajc;
PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
8c3qodB_



30.7 23
PDB header:dna binding protein
Chain: B: PDB Molecule:heterocyst differentiation protein;
PDBTitle: crystal structure of heterocyst differentiation protein, hetr from2 fischerella mv11
9c3rfuC_



30.6 19
PDB header:hydrolase, membrane protein
Chain: C: PDB Molecule:copper efflux atpase;
PDBTitle: crystal structure of a copper-transporting pib-type atpase
10c2kncA_



29.9 18
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
11c2oaxC_



29.7 16
PDB header:transcription
Chain: C: PDB Molecule:mineralocorticoid receptor;
PDBTitle: crystal structure of the s810l mutant mineralocorticoid2 receptor associated with sc9420
12c5cwsF_



20.5 29
PDB header:protein transport
Chain: F: PDB Molecule:nucleoporin nic96;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
13c5cwsL_



17.6 29
PDB header:protein transport
Chain: L: PDB Molecule:nucleoporin nic96;
PDBTitle: crystal structure of the intact chaetomium thermophilum nsp1-nup49-2 nup57 channel nucleoporin heterotrimer bound to its nic96 nuclear3 pore complex attachment site
14c3lk2B_



17.1 42
PDB header:protein binding
Chain: B: PDB Molecule:f-actin-capping protein subunit beta isoforms 1 and 2;
PDBTitle: crystal structure of capz bound to the uncapping motif from carmil
15c4akrB_



15.3 33
PDB header:actin-binding protein
Chain: B: PDB Molecule:f-actin-capping protein subunit beta;
PDBTitle: crystal structure of the cytoplasmic actin capping protein2 cap32_34 from dictyostelium discoideum
16c6roiA_



15.2 15
PDB header:lipid transport
Chain: A: PDB Molecule:probable phospholipid-transporting atpase drs2;
PDBTitle: cryo-em structure of the partially activated drs2p-cdc50p
17c4ojkD_



14.6 47
PDB header:hydrolase/protein binding
Chain: D: PDB Molecule:cgmp-dependent protein kinase 2;
PDBTitle: structure of the cgmp dependent protein kinase ii and rab11b complex
18d1iznb_



14.4 42
Fold:Subunits of heterodimeric actin filament capping protein Capz
Superfamily:Subunits of heterodimeric actin filament capping protein Capz
Family:Capz beta-1 subunit
19c3ukxC_



14.4 29
PDB header:protein transport/inhibitor
Chain: C: PDB Molecule:bimax2 peptide;
PDBTitle: mouse importin alpha: bimax2 peptide complex
20c3vw7A_



13.3 17
PDB header:signaling protein/antagonist
Chain: A: PDB Molecule:proteinase-activated receptor 1, lysozyme;
PDBTitle: crystal structure of human protease-activated receptor 1 (par1) bound2 with antagonist vorapaxar at 2.2 angstrom
21c2ndjA_



not modelled 12.5 10
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e member 3;
PDBTitle: structural basis for kcne3 and estrogen modulation of the kcnq12 channel
22c4ojkC_



not modelled 12.1 47
PDB header:hydrolase/protein binding
Chain: C: PDB Molecule:cgmp-dependent protein kinase 2;
PDBTitle: structure of the cgmp dependent protein kinase ii and rab11b complex
23c6c6lN_



not modelled 11.5 25
PDB header:membrane protein
Chain: N: PDB Molecule:v0 assembly protein 1;
PDBTitle: yeast vacuolar atpase vo in lipid nanodisc
24c2k21A_



not modelled 10.8 10
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e
PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c
25c5eulY_



not modelled 10.5 24
PDB header:protein transport
Chain: Y: PDB Molecule:protein translocase subunit secy;
PDBTitle: structure of the seca-secy complex with a translocating polypeptide2 substrate
26c6mjpG_



not modelled 10.0 7
PDB header:lipid transport
Chain: G: PDB Molecule:lps export abc transporter permease lptg;
PDBTitle: lptb(e163q)fgc from vibrio cholerae
27c4k1cA_



not modelled 8.9 14
PDB header:membrane protein/metal transport
Chain: A: PDB Molecule:vacuolar calcium ion transporter;
PDBTitle: vcx1 calcium/proton exchanger
28c4k1cB_



not modelled 8.8 15
PDB header:membrane protein/metal transport
Chain: B: PDB Molecule:vacuolar calcium ion transporter;
PDBTitle: vcx1 calcium/proton exchanger
29c6irtB_



not modelled 8.8 15
PDB header:membrane protein
Chain: B: PDB Molecule:large neutral amino acids transporter small subunit 1;
PDBTitle: human lat1-4f2hc complex bound with bch
30c4r1iB_



not modelled 8.7 15
PDB header:membrane protein
Chain: B: PDB Molecule:aminobenzoyl-glutamate transporter;
PDBTitle: structure and function of neisseria gonorrhoeae mtrf illuminates a2 class of antimetabolite efflux pumps
31c6m9tA_



not modelled 8.3 18
PDB header:membrane protein
Chain: A: PDB Molecule:prostaglandin e2 receptor ep3 subtype, endolysin chimera;
PDBTitle: crystal structure of ep3 receptor bound to misoprostol-fa
32c3j01A_



not modelled 8.2 43
PDB header:ribosome/ribosomal protein
Chain: A: PDB Molecule:preprotein translocase secy subunit;
PDBTitle: structure of the ribosome-secye complex in the membrane environment
33c2p14A_



not modelled 8.2 24
PDB header:hydrolase
Chain: A: PDB Molecule:heterodimeric restriction endonuclease r.bspd6i small
PDBTitle: crystal structure of small subunit (r.bspd6i2) of the heterodimeric2 restriction endonuclease r.bspd6i
34c2kluA_



not modelled 8.1 23
PDB header:immune system, membrane protein
Chain: A: PDB Molecule:t-cell surface glycoprotein cd4;
PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
35c5e5wB_



not modelled 6.8 26
PDB header:hydrolase
Chain: B: PDB Molecule:hemagglutinin-esterase;
PDBTitle: hemagglutinin-esterase-fusion mutant structure of influenza d virus
36c4xnwC_



not modelled 6.8 8
PDB header:transport protein
Chain: C: PDB Molecule:p2y purinoceptor 1,rubredoxin,p2y purinoceptor 1;
PDBTitle: the human p2y1 receptor in complex with mrs2500
37c4kppA_



not modelled 6.5 6
PDB header:membrane protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of h+/ca2+ exchanger cax
38c1gw4A_



not modelled 6.4 27
PDB header:high density lipoproteins
Chain: A: PDB Molecule:apoa-i;
PDBTitle: the helix-hinge-helix structural motif in human2 apolipoprotein a-i determined by nmr spectroscopy, 13 structure
39c2ewfA_



not modelled 6.1 4
PDB header:hydrolase
Chain: A: PDB Molecule:nicking endonuclease n.bspd6i;
PDBTitle: crystal structure of the site-specific dna nickase n.bspd6i
40c4i0xJ_



not modelled 5.9 21
PDB header:structural genomics, unknown function
Chain: J: PDB Molecule:esat-6-like protein mab_3113;
PDBTitle: crystal structure of the mycobacterum abscessus esxef (mab_3112-2 mab_3113) complex
41c3rkoK_



not modelled 5.8 17
PDB header:oxidoreductase
Chain: K: PDB Molecule:nadh-quinone oxidoreductase subunit k;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
42c5x5yF_



not modelled 5.8 16
PDB header:membrane protein
Chain: F: PDB Molecule:uncharacterized protein;
PDBTitle: a membrane protein complex
43c5jfzF_



not modelled 5.8 34
PDB header:transferase
Chain: F: PDB Molecule:uncharacterized protein yhfg;
PDBTitle: e. coli ecfict in complex with ecfica mutant e28g
44c5jfzB_



not modelled 5.8 34
PDB header:transferase
Chain: B: PDB Molecule:uncharacterized protein yhfg;
PDBTitle: e. coli ecfict in complex with ecfica mutant e28g
45c3aymB_



not modelled 5.7 8
PDB header:signaling protein
Chain: B: PDB Molecule:rhodopsin;
PDBTitle: crystal structure of the batho intermediate of squid rhodopsin
46c4ib4A_



not modelled 5.6 10
PDB header:signaling protein, electron transport
Chain: A: PDB Molecule:chimera protein of human 5-hydroxytryptamine receptor 2b
PDBTitle: crystal structure of the chimeric protein of 5-ht2b-bril in complex2 with ergotamine
47c2e8pA_



not modelled 5.5 30
PDB header:signaling protein
Chain: A: PDB Molecule:elf3 protein;
PDBTitle: solution structure of the n-terminal sam-domain of e74-like2 factor 3
48c6a94B_



not modelled 5.3 8
PDB header:membrane protein
Chain: B: PDB Molecule:5-hydroxytryptamine receptor 2a,soluble cytochrome b562;
PDBTitle: crystal structure of 5-ht2ar in complex with zotepine
49c5l75F_



not modelled 5.3 15
PDB header:transport protein
Chain: F: PDB Molecule:fig000988: predicted permease;
PDBTitle: a protein structure
50c3thgA_



not modelled 5.3 17
PDB header:protein binding
Chain: A: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1,
PDBTitle: crystal structure of the creosote rubisco activase c-domain

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Transmembrane helix prediction 

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