Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2096c_(-)_2354320_2355318
DateMon Aug 5 13:25:21 BST 2019
Unique Job IDba3ca36de31e0cce
SequenceMATSKVERLV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.089 Y:36.635 Z:70.155
Model (left) based on template c6oawA_
Top template information
PDB header:immune system
Chain: A: PDB Molecule:wyl1;
PDBTitle: crystal structure of a crispr cas-related protein
Confidence and coverage
Confidence: 99.4% Coverage: 54%
178 residues ( 54% of your sequence) have been modelled with 99.4% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
296 residues ( 89%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6oawA_
99.4 13
PDB header:immune system
Chain: A: PDB Molecule:wyl1;
PDBTitle: crystal structure of a crispr cas-related protein
2d1j5ya1
99.0 27
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Biotin repressor-like
3c1j5yA_
98.7 27
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, biotin repressor family;
PDBTitle: crystal structure of transcriptional regulator (tm1602) from2 thermotoga maritima at 2.3 a resolution
4d1biaa1
98.6 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Biotin repressor-like
5c5wayB_
97.6 13
PDB header:transcription
Chain: B: PDB Molecule:transcriptional activator;
PDBTitle: mgaspn protein, mga regulator from streptococcus pneumoniae
6c3sqnA_
97.5 17
PDB header:transcription regulator
Chain: A: PDB Molecule:conserved domain protein;
PDBTitle: putative mga family transcriptional regulator from enterococcus2 faecalis
7c4r6iA_
97.3 16
PDB header:transcription
Chain: A: PDB Molecule:anthrax toxin expression trans-acting positive regulator;
PDBTitle: atxa protein, a virulence regulator from bacillus anthracis.
8c3t8tA_
97.2 25
PDB header:unknown function
Chain: A: PDB Molecule:staphylococcus aureus cymr (oxidized form);
PDBTitle: crystal structure of staphylococcus aureus cymr oxidized form
9c3rkxA_
97.2 14
PDB header:ligase
Chain: A: PDB Molecule:biotin-[acetyl-coa-carboxylase] ligase;
PDBTitle: structural characterisation of staphylococcus aureus biotin protein2 ligase
10c2ewnA_
96.9 21
PDB header:ligase, transcription
Chain: A: PDB Molecule:bira bifunctional protein;
PDBTitle: ecoli biotin repressor with co-repressor analog
11c6hsdB_
96.9 18
PDB header:transcription
Chain: B: PDB Molecule:rrf2 family transcriptional regulator;
PDBTitle: crystal structure of the oxidized form of the transcription regulator2 rsrr
12c2y75F_
96.9 19
PDB header:transcription
Chain: F: PDB Molecule:hth-type transcriptional regulator cymr;
PDBTitle: the structure of cymr (yrzc) the global cysteine regulator of b.2 subtilis
13d1stza1
96.8 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Heat-inducible transcription repressor HrcA, N-terminal domain
14c4hf1B_
96.8 25
PDB header:transcription/dna
Chain: B: PDB Molecule:hth-type transcriptional regulator iscr;
PDBTitle: crystal structure of iscr bound to its promoter
15c1mkmA_
96.7 10
PDB header:transcription
Chain: A: PDB Molecule:iclr transcriptional regulator;
PDBTitle: crystal structure of the thermotoga maritima iclr
16d1mkma1
96.5 8
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Transcriptional regulator IclR, N-terminal domain
17c3ereD_
96.4 22
PDB header:dna binding protein/dna
Chain: D: PDB Molecule:arginine repressor;
PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator
18c5whmB_
96.3 12
PDB header:transcription
Chain: B: PDB Molecule:iclr family transcriptional regulator;
PDBTitle: crystal structure of iclr family transcriptional regulator from2 brucella abortus
19c5y6iB_
96.3 24
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator kdgr;
PDBTitle: crystal structure of pseudomonas aeruginosa hmgr
20c2g7uB_
96.3 21
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: 2.3 a structure of putative catechol degradative operon regulator from2 rhodococcus sp. rha1
21c4cicB_
not modelled 96.2 21
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, badm/rrf2 family;
PDBTitle: t. potens iscr
22c2xroE_
not modelled 96.0 28
PDB header:dna-binding protein/dna
Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv;
PDBTitle: crystal structure of ttgv in complex with its dna operator
23c6cmvA_
not modelled 95.6 18
PDB header:gene regulation
Chain: A: PDB Molecule:transcriptional regulator lrs14-like protein;
PDBTitle: crystal structure of archaeal biofilm regulator (abfr2) from2 sulfolobus acidocaldarius
24c3r4kD_
not modelled 95.6 22
PDB header:dna binding protein
Chain: D: PDB Molecule:transcriptional regulator, iclr family;
PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution
25d1mzba_
not modelled 95.4 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:FUR-like
26c5tjjA_
not modelled 95.4 16
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator, iclr family;
PDBTitle: crystal structure of icir transcriptional regulator from2 alicyclobacillus acidocaldarius
27c3k69A_
not modelled 95.4 16
PDB header:transcription
Chain: A: PDB Molecule:putative transcription regulator;
PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution
28c2fe3B_
not modelled 95.2 13
PDB header:dna binding protein
Chain: B: PDB Molecule:peroxide operon regulator;
PDBTitle: the crystal structure of bacillus subtilis perr-zn reveals a novel2 zn(cys)4 structural redox switch
29c3mq0A_
not modelled 95.2 14
PDB header:transcription repressor
Chain: A: PDB Molecule:transcriptional repressor of the blcabc operon;
PDBTitle: crystal structure of agobacterium tumefaciens repressor blcr
30d2p5ka1
not modelled 95.1 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
31c4i7hA_
not modelled 95.0 14
PDB header:transcription
Chain: A: PDB Molecule:peroxide stress sensing regulator;
PDBTitle: structural basis for peroxide sensing and gene regulation by perr from2 streptococcus pyogenes
32c5fd6A_
not modelled 95.0 11
PDB header:transcription
Chain: A: PDB Molecule:ferric uptake regulation protein;
PDBTitle: zinc-bound manganese uptake regulator
33c5h1aC_
not modelled 95.0 27
PDB header:transcription regulator
Chain: C: PDB Molecule:iclr transcription factor homolog;
PDBTitle: crystal structure of an iclr homolog from microbacterium sp. strain2 hm58-2
34d2p4wa1
not modelled 94.9 8
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:PF1790-like
35c2o0yB_
not modelled 94.9 9
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp.
36c4razB_
not modelled 94.8 7
PDB header:metal binding protein
Chain: B: PDB Molecule:dna-binding transcriptional dual regulator of siderophore
PDBTitle: crystal structure of magnetospirillum gryphiswaldense msr-1 holo-fur
37c3mwmA_
not modelled 94.8 11
PDB header:transcription
Chain: A: PDB Molecule:putative metal uptake regulation protein;
PDBTitle: graded expression of zinc-responsive genes through two regulatory2 zinc-binding sites in zur
38c2xigA_
not modelled 94.8 13
PDB header:transcription
Chain: A: PDB Molecule:ferric uptake regulation protein;
PDBTitle: the structure of the helicobacter pylori ferric uptake2 regulator fur reveals three functional metal binding sites
39c1b4aA_
not modelled 94.8 12
PDB header:repressor
Chain: A: PDB Molecule:arginine repressor;
PDBTitle: structure of the arginine repressor from bacillus stearothermophilus
40c5nl9B_
not modelled 94.6 17
PDB header:dna binding protein
Chain: B: PDB Molecule:transcriptional regulator (fur family);
PDBTitle: crystal structure of a peroxide stress regulator from leptospira2 interrogans
41c2o03A_
not modelled 94.6 7
PDB header:gene regulation
Chain: A: PDB Molecule:probable zinc uptake regulation protein furb;
PDBTitle: crystal structure of furb from m. tuberculosis- a zinc uptake2 regulator
42c4mtdA_
not modelled 94.6 15
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:zinc uptake regulation protein;
PDBTitle: zinc uptake regulator complexed with zinc and dna
43d1aoya_
not modelled 94.4 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
44d1o57a1
not modelled 94.4 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:N-terminal domain of Bacillus PurR
45c6j05B_
not modelled 94.3 12
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
46c1stzB_
not modelled 94.2 20
PDB header:transcription
Chain: B: PDB Molecule:heat-inducible transcription repressor hrca homolog;
PDBTitle: crystal structure of a hypothetical protein at 2.2 a resolution
47c5dukA_
not modelled 94.1 8
PDB header:transcription
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: n-terminal structure of putative dna binding transcription factor from2 thermoplasmatales archaeon scgc ab-539-n05
48c3r0aB_
not modelled 94.1 14
PDB header:transcription regulator
Chain: B: PDB Molecule:putative transcriptional regulator;
PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
49c4g6qA_
not modelled 94.1 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein kfla_6221 from2 kribbella flavida dsm 17836
50c5w1eA_
not modelled 94.0 13
PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: pobr in complex with phb
51d1f9na1
not modelled 93.5 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
52d1ulya_
not modelled 93.4 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Hypothetical protein PH1932
53d1ub9a_
not modelled 93.4 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MarR-like transcriptional regulators
54d2d1ha1
not modelled 93.4 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
55c6dk4A_
not modelled 93.3 8
PDB header:metal transport
Chain: A: PDB Molecule:ferric uptake regulation protein;
PDBTitle: crystal structure of campylobacter jejuni peroxide stress regulator
56c2oqgA_
not modelled 93.3 19
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
57c3lwfD_
not modelled 93.2 25
PDB header:transcription regulator
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution
58d1b4aa1
not modelled 93.0 11
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Arginine repressor (ArgR), N-terminal DNA-binding domain
59c2ia2D_
not modelled 92.9 15
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1
60c5nbcD_
not modelled 92.6 14
PDB header:dna binding protein
Chain: D: PDB Molecule:ferric uptake regulation protein;
PDBTitle: structure of prokaryotic transcription factors
61c2fu4B_
not modelled 92.5 16
PDB header:dna binding protein
Chain: B: PDB Molecule:ferric uptake regulation protein;
PDBTitle: crystal structure of the dna binding domain of e.coli fur (ferric2 uptake regulator)
62c2w57A_
not modelled 92.4 21
PDB header:metal transport
Chain: A: PDB Molecule:ferric uptake regulation protein;
PDBTitle: crystal structure of the vibrio cholerae ferric uptake2 regulator (fur) reveals structural rearrangement of the3 dna-binding domains
63d1r1ta_
not modelled 92.4 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
64c5l0pA_
not modelled 92.3 17
PDB header:de novo protein
Chain: A: PDB Molecule:transcription factor etv6, transcription factor etv6,
PDBTitle: symmetry-based assembly of a two-dimensional protein lattice
65c2l4aA_
not modelled 92.1 25
PDB header:dna binding protein
Chain: A: PDB Molecule:leucine responsive regulatory protein;
PDBTitle: nmr structure of the dna-binding domain of e.coli lrp
66c3cuoB_
not modelled 92.0 16
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav;
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
67c6j0eB_
not modelled 92.0 10
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
68c2jscB_
not modelled 91.9 12
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator rv1994c/mt2050;
PDBTitle: nmr structure of the cadmium metal-sensor cmtr from mycobacterium2 tuberculosis
69d1r1ua_
not modelled 91.5 7
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
70c3v4gA_
not modelled 91.3 19
PDB header:dna binding protein
Chain: A: PDB Molecule:arginine repressor;
PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6
71c3f6oB_
not modelled 91.3 14
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
72c5jbrA_
not modelled 91.3 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bcav_2135;
PDBTitle: crystal structure of uncharacterized protein bcav_2135 from2 beutenbergia cavernae
73c3ke2A_
not modelled 91.2 19
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein yp_928783.1;
PDBTitle: crystal structure of a duf2131 family protein (sama_2911) from2 shewanella amazonensis sb2b at 2.50 a resolution
74c1r22B_
not modelled 91.2 15
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
75c4etsB_
not modelled 90.8 14
PDB header:metal binding protein
Chain: B: PDB Molecule:ferric uptake regulation protein;
PDBTitle: crystal structure of campylobacter jejuni ferric uptake regulator
76c3lmmB_
not modelled 90.8 20
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the dip2311 protein from corynebacterium2 diphtheriae, northeast structural genomics consortium target cdr35
77c2vbzA_
not modelled 90.6 17
PDB header:dna-binding protein
Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan
78d1xd7a_
not modelled 90.3 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Transcriptional regulator Rrf2
79d2cg4a1
not modelled 90.3 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
80c3lmmA_
not modelled 90.3 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the dip2311 protein from corynebacterium2 diphtheriae, northeast structural genomics consortium target cdr35
81c3jthA_
not modelled 90.1 12
PDB header:transcription
Chain: A: PDB Molecule:transcription activator hlyu;
PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6
82c2ahqA_
not modelled 90.0 10
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor rpon;
PDBTitle: solution structure of the c-terminal rpon domain of sigma-2 54 from aquifex aeolicus
83c4omzG_
not modelled 89.9 14
PDB header:transcription
Chain: G: PDB Molecule:nolr;
PDBTitle: crystal structure of nolr from sinorhizobium fredii
84c2lkpB_
not modelled 89.8 14
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, arsr family;
PDBTitle: solution structure of apo-nmtr
85c2x4hA_
not modelled 89.7 6
PDB header:transcription
Chain: A: PDB Molecule:hypothetical protein sso2273;
PDBTitle: crystal structure of the hypothetical protein sso2273 from2 sulfolobus solfataricus
86c2v79B_
not modelled 89.7 16
PDB header:dna binding protein
Chain: B: PDB Molecule:dna replication protein dnad;
PDBTitle: crystal structure of the n-terminal domain of dnad from bacillus2 subtilis
87c2kkoB_
not modelled 89.6 18
PDB header:dna binding protein
Chain: B: PDB Molecule:possible transcriptional regulatory protein
PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
88d1i1ga1
not modelled 89.0 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
89d1ku9a_
not modelled 89.0 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:DNA-binding protein Mj223
90c3eyyA_
not modelled 88.9 17
PDB header:transport
Chain: A: PDB Molecule:putative iron uptake regulatory protein;
PDBTitle: structural basis for the specialization of nur, a nickel-2 specific fur homologue, in metal sensing and dna3 recognition
91c1o57A_
not modelled 88.6 19
PDB header:dna binding protein
Chain: A: PDB Molecule:pur operon repressor;
PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis
92c3i4pA_
not modelled 88.6 12
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, asnc family;
PDBTitle: crystal structure of asnc family transcriptional regulator from2 agrobacterium tumefaciens
93d2cfxa1
not modelled 88.6 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
94c4pcqC_
not modelled 88.4 17
PDB header:transcription
Chain: C: PDB Molecule:possible transcriptional regulatory protein (probably
PDBTitle: crystal structure of mtbaldr (rv2779c)
95c3pqkD_
not modelled 88.3 19
PDB header:transcription
Chain: D: PDB Molecule:biofilm growth-associated repressor;
PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa
96c1f5tA_
not modelled 88.3 10
PDB header:transcription/dna
Chain: A: PDB Molecule:diphtheria toxin repressor;
PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
97d2cyya1
not modelled 88.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Lrp/AsnC-like transcriptional regulator N-terminal domain
98c3f6vA_
not modelled 88.2 19
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
99c4nb5D_
not modelled 88.0 20
PDB header:dna binding protein
Chain: D: PDB Molecule:dna binding protein;
PDBTitle: crystal structure of a transcriptional regulator
100c3eqxB_
not modelled 87.8 18
PDB header:dna binding protein
Chain: B: PDB Molecule:fic domain containing transcriptional regulator;
PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution
101c2ia0A_
not modelled 86.8 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative hth-type transcriptional regulator pf0864;
PDBTitle: transcriptional regulatory protein pf0864 from pyrococcus furiosus a2 member of the asnc family (pf0864)
102c2e1cA_
not modelled 86.0 15
PDB header:transcription/dna
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519;
PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex
103c2cg4B_
not modelled 86.0 13
PDB header:transcription
Chain: B: PDB Molecule:regulatory protein asnc;
PDBTitle: structure of e.coli asnc
104c2h09A_
not modelled 85.6 14
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator mntr;
PDBTitle: crystal structure of diphtheria toxin repressor like protein2 from e. coli
105c2dbbA_
not modelled 85.5 22
PDB header:transcriptional regulator
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061;
PDBTitle: crystal structure of ph0061
106c5mwwA_
not modelled 85.3 23
PDB header:transferase
Chain: A: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: sigma1.1 domain of sigmaa from bacillus subtilis
107d2hs5a1
not modelled 85.1 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:GntR-like transcriptional regulators
108d2dt5a1
not modelled 85.0 12
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Transcriptional repressor Rex, N-terminal domain
109c1i1gA_
not modelled 85.0 15
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator lrpa;
PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus
110d1z05a1
not modelled 84.9 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ROK associated domain
111c3zmdD_
not modelled 84.9 2
PDB header:transcription
Chain: D: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of absc, a marr family transcriptional2 regulator from streptomyces coelicolor
112c2p6tH_
not modelled 84.6 22
PDB header:transcription
Chain: H: PDB Molecule:transcriptional regulator, lrp/asnc family;
PDBTitle: crystal structure of transcriptional regulator nmb0573 and l-leucine2 complex from neisseria meningitidis
113c2e7xA_
not modelled 84.5 10
PDB header:transcription regulator
Chain: A: PDB Molecule:150aa long hypothetical transcriptional regulator;
PDBTitle: structure of the lrp/asnc like transcriptional regulator from2 sulfolobus tokodaii 7 complexed with its cognate ligand
114c3deuB_
not modelled 84.3 11
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator slya;
PDBTitle: crystal structure of transcription regulatory protein slya from2 salmonella typhimurium in complex with salicylate ligands
115d1sfxa_
not modelled 84.3 17
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
116d2h6ca1
not modelled 83.7 22
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
117c2k6xA_
not modelled 83.5 29
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
118c4o6jA_
not modelled 83.3 20
PDB header:metal binding protein
Chain: A: PDB Molecule:iron-dependent transcription repressor related protein;
PDBTitle: crystal sturucture of t. acidophilum ider
119c2cfxD_
not modelled 83.2 13
PDB header:transcription
Chain: D: PDB Molecule:hth-type transcriptional regulator lrpc;
PDBTitle: structure of b.subtilis lrpc
120c5aimB_
not modelled 83.1 15
PDB header:transcription
Chain: B: PDB Molecule:transcription factor tau 138 kda subunit;
PDBTitle: crystal structure of t138 central ewh domain

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite