Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2109c_(prcA)_2368991_2369737
DateMon Aug 5 13:25:22 BST 2019
Unique Job IDc40a8dd9426e45b7
SequenceVSFPYFISPE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:50.378 Y:46.096 Z:56.110
Model (left) based on template d1q5qa_
Top template information
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
Confidence and coverage
Confidence:100.0% Coverage: 88%
218 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1q5qa_
100.0 72
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
2c1q5rD_
100.0 72
PDB header:hydrolase
Chain: D: PDB Molecule:proteasome alpha-type subunit 1;
PDBTitle: the rhodococcus 20s proteasome with unprocessed pro-peptides
3c6qm7C_
100.0 19
PDB header:hydrolase
Chain: C: PDB Molecule:proteasome alpha3 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit complexed with gsk3494245
4c5ln3C_
100.0 19
PDB header:hydrolase
Chain: C: PDB Molecule:proteasome subunit alpha type-4;
PDBTitle: the human 26s proteasome at 6.8 ang.
5d1rypb_
100.0 20
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
6d1iruc_
100.0 19
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
7d1irug_
100.0 13
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
8c3bdmF_
100.0 17
PDB header:hydrolase
Chain: F: PDB Molecule:proteasome component c1;
PDBTitle: yeast 20s proteasome:glidobactin a-complex
9d1rypg_
100.0 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
10c6qm7A_
100.0 19
PDB header:hydrolase
Chain: A: PDB Molecule:proteasome alpha1 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit complexed with gsk3494245
11c1iruF_
100.0 18
PDB header:hydrolase
Chain: F: PDB Molecule:20s proteasome;
PDBTitle: crystal structure of the mammalian 20s proteasome at 2.75 a2 resolution
12d1iruf_
100.0 18
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
13d1irua_
100.0 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
14d1j2pa_
100.0 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
15d1irud_
100.0 16
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
16d1rypc_
100.0 19
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
17c6qm7T_
100.0 19
PDB header:hydrolase
Chain: T: PDB Molecule:proteasome alpha6 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit complexed with gsk3494245
18c6qm8D_
100.0 19
PDB header:hydrolase
Chain: D: PDB Molecule:proteasome alpha4 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit apo structure
19c6qm8B_
100.0 21
PDB header:hydrolase
Chain: B: PDB Molecule:proteasome alpha2 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit apo structure
20d1irub_
100.0 21
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
21d1yara1
not modelled 100.0 20
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
22d1rype_
not modelled 100.0 18
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
23c6qm8U_
not modelled 100.0 16
PDB header:hydrolase
Chain: U: PDB Molecule:proteasome alpha7 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit apo structure
24c5fmgQ_
not modelled 100.0 17
PDB header:hydrolase
Chain: Q: PDB Molecule:proteasome subunit alpha type;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
25d1rypa_
not modelled 100.0 16
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
26c5fmgD_
not modelled 100.0 17
PDB header:hydrolase
Chain: D: PDB Molecule:proteasome subunit alpha type;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
27d1rypf_
not modelled 100.0 19
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
28c6qm7E_
not modelled 100.0 23
PDB header:hydrolase
Chain: E: PDB Molecule:proteasome alpha5 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit complexed with gsk3494245
29d1rypd_
not modelled 100.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
30d1q5rh_
not modelled 100.0 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
31d1irue_
not modelled 100.0 20
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
32c3h4pB_
not modelled 100.0 19
PDB header:hydrolase
Chain: B: PDB Molecule:proteasome subunit alpha;
PDBTitle: proteasome 20s core particle from methanocaldococcus jannaschii
33c5fmgT_
not modelled 100.0 20
PDB header:hydrolase
Chain: T: PDB Molecule:proteosome subunit alpha type 1, putative;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
34c5fmgB_
not modelled 100.0 20
PDB header:hydrolase
Chain: B: PDB Molecule:proteasome subunit alpha type 2, putative;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
35c5fmgA_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:proteasome subunit alpha, putative;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
36c5fmgS_
not modelled 100.0 18
PDB header:hydrolase
Chain: S: PDB Molecule:proteasome subunit alpha type;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
37c5fmgU_
not modelled 100.0 15
PDB header:hydrolase
Chain: U: PDB Molecule:proteasome component c8, putative;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
38c3mka2_
not modelled 100.0 15
PDB header:hydrolase
Chain: 2: PDB Molecule:proteasome subunit beta;
PDB Fragment:20s proteasome beta-subunit; PDBTitle: crystal structure of mycobacterium tuberculosis proteasome with2 propetide and an t1a mutation at beta-subunit
39c2jayA_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:proteasome;
PDBTitle: proteasome beta subunit prcb from mycobacterium2 tuberculosis
40c2h6jI_
not modelled 100.0 16
PDB header:hydrolase
Chain: I: PDB Molecule:proteasome beta-type subunit 1;
PDBTitle: crystal structure of the beta f145a rhodococcus proteasome
41d1j2qh_
not modelled 100.0 18
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
42c6qm8Y_
not modelled 100.0 16
PDB header:hydrolase
Chain: Y: PDB Molecule:proteasome beta4 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit apo structure
43d1yarh1
not modelled 100.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
44c3nzxK_
not modelled 100.0 12
PDB header:hydrolase/hydrolase inhibitor
Chain: K: PDB Molecule:proteasome component pre2;
PDBTitle: crystal structure of the yeast 20s proteasome in complex with ligand2 2c
45c3h4pj_
not modelled 100.0 13
PDB header:hydrolase
Chain: J: PDB Molecule:proteasome subunit alpha;
PDBTitle: proteasome 20s core particle from methanocaldococcus jannaschii
46c6qm7Z_
not modelled 100.0 16
PDB header:hydrolase
Chain: Z: PDB Molecule:proteasome beta5 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit complexed with gsk3494245
47c2fhgC_
not modelled 100.0 15
PDB header:hydrolase
Chain: C: PDB Molecule:proteasome, beta subunit;
PDBTitle: crystal structure of mycobacterial tuberculosis proteasome
48d1ryph_
not modelled 100.0 16
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
49d1q5qh_
not modelled 100.0 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
50d1irul_
not modelled 100.0 12
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
51d1rypl_
not modelled 100.0 12
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
52d1iruj_
not modelled 100.0 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
53d1rypi_
not modelled 100.0 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
54c6avoC_
not modelled 100.0 12
PDB header:hydrolase/hydrolase inhibitor
Chain: C: PDB Molecule:proteasome subunit beta type-8;
PDBTitle: cryo-em structure of human immunoproteasome with a novel2 noncompetitive inhibitor that selectively inhibits activated3 lymphocytes
55d1iru2_
not modelled 100.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
56c6qm7V_
not modelled 100.0 14
PDB header:hydrolase
Chain: V: PDB Molecule:proteasome beta1 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit complexed with gsk3494245
57d1iruh_
not modelled 100.0 13
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
58c3nzwH_
not modelled 100.0 17
PDB header:hydrolase/hydrolase inhibitor
Chain: H: PDB Molecule:proteasome component pup1;
PDBTitle: crystal structure of the yeast 20s proteasome in complex with 2b
59d1ryp1_
not modelled 100.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
60c2zcyM_
not modelled 100.0 15
PDB header:hydrolase
Chain: M: PDB Molecule:proteasome component pre4;
PDBTitle: yeast 20s proteasome:syringolin a-complex
61d1ryp2_
not modelled 100.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
62d1rypk_
not modelled 100.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
63c3unhb_
not modelled 100.0 16
PDB header:hydrolase
Chain: B: PDB Molecule:proteasome subunit alpha type-4;
PDBTitle: mouse 20s immunoproteasome
64c6qm7N_
not modelled 100.0 16
PDB header:hydrolase
Chain: N: PDB Molecule:proteasome beta7 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit complexed with gsk3494245
65c6qm8a_
not modelled 100.0 12
PDB header:hydrolase
Chain: A: PDB Molecule:proteasome alpha1 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit apo structure
66d1iruk_
not modelled 100.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
67c3unhV_
not modelled 100.0 20
PDB header:hydrolase
Chain: V: PDB Molecule:proteasome subunit beta type-10;
PDBTitle: mouse 20s immunoproteasome
68c5fmgV_
not modelled 100.0 12
PDB header:hydrolase
Chain: V: PDB Molecule:proteasome, putative;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
69d1irui_
not modelled 100.0 16
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
70c5fmga_
not modelled 100.0 16
PDB header:hydrolase
Chain: A: PDB Molecule:proteasome subunit alpha, putative;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
71d1iru1_
not modelled 100.0 14
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
72c6qm8W_
not modelled 100.0 17
PDB header:hydrolase
Chain: W: PDB Molecule:proteasome beta2 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit apo structure
73d1rypj_
not modelled 100.0 16
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
74c5fmgK_
not modelled 100.0 13
PDB header:hydrolase
Chain: K: PDB Molecule:proteasome subunit beta type;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
75c6qm8X_
not modelled 100.0 14
PDB header:hydrolase
Chain: X: PDB Molecule:proteasome beta3 chain;
PDBTitle: leishmania tarentolae proteasome 20s subunit apo structure
76c5nygF_
not modelled 100.0 13
PDB header:hydrolase
Chain: F: PDB Molecule:anbu;
PDBTitle: anbu (gly-1) mutant from hyphomicrobium sp. strain mc1 - sg p2(1)2(1)2 2(1)
77c5fmgL_
not modelled 100.0 14
PDB header:hydrolase
Chain: L: PDB Molecule:proteasome subunit beta type;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
78c5fmgI_
not modelled 100.0 17
PDB header:hydrolase
Chain: I: PDB Molecule:proteasome subunit beta type;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
79c5fmgb_
not modelled 100.0 11
PDB header:hydrolase
Chain: B: PDB Molecule:proteasome subunit alpha type 2, putative;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
80c5loyD_
not modelled 100.0 15
PDB header:hydrolase
Chain: D: PDB Molecule:designed anbu protein;
PDBTitle: helical assembly of a designed anbu protein
81c5nywT_
not modelled 100.0 11
PDB header:unknown function
Chain: T: PDB Molecule:proteasome subunit;
PDBTitle: anbu (ancestral beta-subunit) from yersinia bercovieri
82c5fmgJ_
not modelled 100.0 16
PDB header:hydrolase
Chain: J: PDB Molecule:beta3 proteasome subunit, putative;
PDBTitle: structure and function based design of plasmodium-selective proteasome2 inhibitors
83c5loxH_
not modelled 100.0 17
PDB header:hydrolase
Chain: H: PDB Molecule:peptidase;
PDBTitle: helical assembly of the anbu complex from pseudomonas aeruginosa
84c4hnzG_
not modelled 100.0 17
PDB header:hydrolase
Chain: G: PDB Molecule:hslvu complex proteolytic subunit, putative;
PDBTitle: crystal structure of eukaryotic hslv from trypanosoma brucei
85d2z3ba1
not modelled 100.0 15
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
86c5ovuB_
not modelled 99.9 16
PDB header:hydrolase
Chain: B: PDB Molecule:beta-proteobacteria proteasome homologue;
PDBTitle: cupriavidus metallidurans bph
87c5ovsG_
not modelled 99.9 14
PDB header:hydrolase
Chain: G: PDB Molecule:bph;
PDBTitle: thiobacillus denitrificans bph
88d1e94a_
not modelled 99.9 19
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
89d1g3ka_
not modelled 99.9 17
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
90d1m4ya_
not modelled 99.9 14
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Proteasome subunits
91d1cuka1
not modelled 61.7 18
Fold:RuvA C-terminal domain-like
Superfamily:DNA helicase RuvA subunit, C-terminal domain
Family:DNA helicase RuvA subunit, C-terminal domain
92c4nkpD_
not modelled 59.4 20
PDB header:chaperone
Chain: D: PDB Molecule:putative extracellular heme-binding protein;
PDBTitle: crystal structure of a putative extracellular heme-binding protein2 (despig_02683) from desulfovibrio piger atcc 29098 at 1.24 a3 resolution
93c3fpvC_
not modelled 57.0 38
PDB header:heme binding protein
Chain: C: PDB Molecule:extracellular haem-binding protein;
PDBTitle: crystal structure of hbps
94d2a2la1
not modelled 56.0 16
Fold:Profilin-like
Superfamily:GlcG-like
Family:GlcG-like
95c6bwsA_
not modelled 51.3 27
PDB header:unknown function
Chain: A: PDB Molecule:glycolate utilization protein;
PDBTitle: crystal structure of efga from methylobacterium extorquens
96c4eo3A_
not modelled 47.1 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:bacterioferritin comigratory protein/nadh dehydrogenase;
PDBTitle: peroxiredoxin nitroreductase fusion enzyme
97c2yztA_
not modelled 40.1 19
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ttha1756;
PDBTitle: crystal structure of uncharacterized conserved protein from thermus2 thermophilus hb8
98d1u94a2
not modelled 39.4 14
Fold:Anti-LPS factor/recA domain
Superfamily:RecA protein, C-terminal domain
Family:RecA protein, C-terminal domain
99d1xp8a2
not modelled 31.0 17
Fold:Anti-LPS factor/recA domain
Superfamily:RecA protein, C-terminal domain
Family:RecA protein, C-terminal domain
100d1ubea2
not modelled 28.6 23
Fold:Anti-LPS factor/recA domain
Superfamily:RecA protein, C-terminal domain
Family:RecA protein, C-terminal domain
101d1mo6a2
not modelled 27.3 23
Fold:Anti-LPS factor/recA domain
Superfamily:RecA protein, C-terminal domain
Family:RecA protein, C-terminal domain
102c2rbgB_
not modelled 26.8 15
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative uncharacterized protein st0493;
PDBTitle: crystal structure of hypothetical protein(st0493) from2 sulfolobus tokodaii
103d2odgc1
not modelled 25.6 17
Fold:LEM/SAP HeH motif
Superfamily:LEM domain
Family:LEM domain
104d2g84a1
not modelled 24.5 30
Fold:Cytidine deaminase-like
Superfamily:Cytidine deaminase-like
Family:Deoxycytidylate deaminase-like
105c1wnmA_
not modelled 24.3 59
PDB header:transcription
Chain: A: PDB Molecule:fibroin-modulator binding-protein-1;
PDBTitle: nmr structure of fmbp-1 tandem repeat 2 in 30%(v/v) tfe2 solution
106c1hjpA_
not modelled 22.3 19
PDB header:dna recombination
Chain: A: PDB Molecule:ruva;
PDBTitle: holliday junction binding protein ruva from e. coli

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