Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2117_(-)_2377156_2377449
DateMon Aug 5 13:25:23 BST 2019
Unique Job ID2b099088c4c8934c
SequenceMWIGWLEFDV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:44.068 Y:33.386 Z:33.967
Model (left) based on template d1j27a_
Top template information
Fold:Ferredoxin-like
Superfamily:Hypothetical protein TT1725
Family:Hypothetical protein TT1725
Confidence and coverage
Confidence:100.0% Coverage: 98%
95 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1j27a_



100.0 23
Fold:Ferredoxin-like
Superfamily:Hypothetical protein TT1725
Family:Hypothetical protein TT1725
2c3m20A_



38.1 13
PDB header:isomerase
Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative;
PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution
3c4lkbA_



35.0 23
PDB header:isomerase
Chain: A: PDB Molecule:hypothetical protein alr4568/putative 4-oxalocrotonate
PDBTitle: crystal structure of a putative 4-oxalocrotonate tautomerase from2 nostoc sp. pcc 7120
4d3bypa1



34.9 17
Fold:Alpha-lytic protease prodomain-like
Superfamily:Cation efflux protein cytoplasmic domain-like
Family:Cation efflux protein cytoplasmic domain-like
5c6qekB_



33.8 14
PDB header:transport protein
Chain: B: PDB Molecule:magnetosome protein;
PDBTitle: putative membrane tansporter, magnetosome protein mamm ctd2 [desulfamplus magnetovallimortis bw-1]
6d1mwwa_



26.7 20
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:Hypothetical protein HI1388.1
7c4fdxB_



22.0 21
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonase tautomerase isozyme;
PDBTitle: kinetic and structural characterization of the 4-oxalocrotonate2 tautomerase isozymes from methylibium petroleiphilum
8c1p58E_



19.7 23
PDB header:virus
Chain: E: PDB Molecule:envelope protein m;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
9c2flzC_



19.1 11
PDB header:hydrolase
Chain: C: PDB Molecule:cis-3-chloroacrylic acid dehalogenase;
PDBTitle: the x-ray structure of cis-3-chloroacrylic acid dehalogenase (cis-2 caad) with a sulfate ion bound in the active site
10c1p58F_



18.8 23
PDB header:virus
Chain: F: PDB Molecule:envelope protein m;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
11c4fazB_



18.0 18
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate isomerase protein;
PDBTitle: kinetic and structural characterization of the 4-oxalocrotonate2 tautomerase isozymes from methylibium petroleiphilum
12c2op8A_



17.8 18
PDB header:isomerase
Chain: A: PDB Molecule:probable tautomerase ywhb;
PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase
13c3ry0A_



17.5 19
PDB header:isomerase
Chain: A: PDB Molecule:putative tautomerase;
PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway
14c2vd2A_



17.1 22
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: the crystal structure of hisg from b. subtilis
15c5m8hH_



17.1 19
PDB header:transferase
Chain: H: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: atp phosphoribosyltransferase (hiszg atpprt) from psychrobacter2 arcticus
16d2bm0a4



17.0 38
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
17d1ve4a1



16.7 44
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
18d1iwga3



16.3 13
Fold:Ferredoxin-like
Superfamily:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Family:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
19c2mcfA_



15.1 17
PDB header:unknown function
Chain: A: PDB Molecule:tgam_1934;
PDBTitle: nmr structure of tgam_1934
20d1otfa_



13.6 12
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:4-oxalocrotonate tautomerase-like
21d2v0ea1



not modelled 13.0 13
Fold:GYF/BRK domain-like
Superfamily:BRK domain-like
Family:BRK domain-like
22c5ho5D_



not modelled 12.9 6
PDB header:metal transport
Chain: D: PDB Molecule:magnetosome protein mamb;
PDBTitle: mamb
23d2ckaa1



not modelled 12.4 31
Fold:GYF/BRK domain-like
Superfamily:BRK domain-like
Family:BRK domain-like
24c2ckaA_



not modelled 12.4 31
PDB header:hydrolase
Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 8;
PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction
25d1zbsa2



not modelled 11.9 9
Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:BadF/BadG/BcrA/BcrD-like
26d1knya2



not modelled 11.8 6
Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:Kanamycin nucleotidyltransferase (KNTase), N-terminal domain
27c3iclA_



not modelled 11.2 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:eal/ggdef domain protein;
PDBTitle: x-ray structure of protein (eal/ggdef domain protein) from2 m.capsulatus, northeast structural genomics consortium target mcr174c
28c4kunB_



not modelled 11.0 16
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein lpp1115;
PDBTitle: crystal structure of legionella pneumophila lpp1115 / kaib
29d2fgca2



not modelled 10.9 20
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
30d1r5pa_



not modelled 10.9 16
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:KaiB-like
31d1iwga1



not modelled 10.9 3
Fold:Ferredoxin-like
Superfamily:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Family:Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
32c2ckcA_



not modelled 10.1 13
PDB header:hydrolase
Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 7;
PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction
33d2ckca1



not modelled 10.1 13
Fold:GYF/BRK domain-like
Superfamily:BRK domain-like
Family:BRK domain-like
34c2lvwA_



not modelled 10.1 16
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase isozyme 1 small subunit;
PDBTitle: solution nmr studies of the dimeric regulatory subunit ilvn of the2 e.coli acetohydroxyacid synthase i (ahas i)
35c1vw44_



not modelled 9.9 11
PDB header:ribosome
Chain: 4: PDB Molecule:54s ribosomal protein l51, mitochondrial;
PDBTitle: structure of the yeast mitochondrial large ribosomal subunit
36c3mb2G_



not modelled 9.5 28
PDB header:isomerase
Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit;
PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily
37c5unqF_



not modelled 9.2 18
PDB header:hydrolase
Chain: F: PDB Molecule:putative tautomerase;
PDBTitle: crystal structure of pt0534 inactivated by 2-oxo-3-pentynoate
38d1z7me1



not modelled 9.1 28
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
39c5wx8B_



not modelled 8.9 17
PDB header:dna binding protein
Chain: B: PDB Molecule:immediate-early protein 2;
PDBTitle: human herpesvirus 6a immediate early protein 2 c-terminal domain
40d2pc6a2



not modelled 8.8 7
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
41c2l2lA_



not modelled 8.1 21
PDB header:transferase
Chain: A: PDB Molecule:transcriptional repressor p66-alpha;
PDBTitle: solution structure of the coiled-coil complex between mbd2 and2 p66alpha
42c3mlcC_



not modelled 7.9 18
PDB header:isomerase
Chain: C: PDB Molecule:fg41 malonate semialdehyde decarboxylase;
PDBTitle: crystal structure of fg41msad inactivated by 3-chloropropiolate
43c5bndA_



not modelled 7.7 27
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter, atp-binding protein;
PDBTitle: crystal structure of the c-terminal domain of tagh
44c5uifC_



not modelled 7.7 6
PDB header:hydrolase
Chain: C: PDB Molecule:ps01740;
PDBTitle: crystal structure of native ps01740
45c2x4kB_



not modelled 7.2 16
PDB header:isomerase
Chain: B: PDB Molecule:4-oxalocrotonate tautomerase;
PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa)
46c6d9mA_



not modelled 7.0 18
PDB header:hydrolase
Chain: A: PDB Molecule:fusion protein of endolysin,response receiver sensor
PDBTitle: t4-lysozyme fusion to geobacter ggdef
47c2zztA_



not modelled 7.0 18
PDB header:transport protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the cytosolic domain of the cation2 diffusion facilitator family protein
48d2f1fa1



not modelled 7.0 17
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
49d1bjpa_



not modelled 6.9 19
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:4-oxalocrotonate tautomerase-like
50c3ezkB_



not modelled 6.8 25
PDB header:hydrolase
Chain: B: PDB Molecule:dna packaging protein gp17;
PDBTitle: bacteriophage t4 gp17 motor assembly based on crystal structures and2 cryo-em reconstructions
51c2f1fA_



not modelled 6.8 13
PDB header:transferase
Chain: A: PDB Molecule:acetolactate synthase isozyme iii small subunit;
PDBTitle: crystal structure of the regulatory subunit of acetohydroxyacid2 synthase isozyme iii from e. coli
52d2aala1



not modelled 6.7 26
Fold:Tautomerase/MIF
Superfamily:Tautomerase/MIF
Family:MSAD-like
53d2v0fa1



not modelled 6.6 25
Fold:GYF/BRK domain-like
Superfamily:BRK domain-like
Family:BRK domain-like
54c5ensA_



not modelled 6.5 7
PDB header:transport protein
Chain: A: PDB Molecule:multidrug efflux pump subunit acrb,multidrug efflux pump
PDBTitle: rhodamine bound structure of bacterial efflux pump.
55d1rp3a1



not modelled 6.5 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family:Sigma3 domain
56c2kzfA_



not modelled 6.5 18
PDB header:ribosomal protein
Chain: A: PDB Molecule:ribosome-binding factor a;
PDBTitle: solution nmr structure of the thermotoga maritima protein tm0855 a2 putative ribosome binding factor a
57c3mgjA_



not modelled 6.4 16
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein mj1480;
PDBTitle: crystal structure of the saccharop_dh_n domain of mj1480 protein from2 methanococcus jannaschii. northeast structural genomics consortium3 target mjr83a.
58c3j2pD_



not modelled 6.2 23
PDB header:viral protein
Chain: D: PDB Molecule:small envelope protein m;
PDBTitle: cryoem structure of dengue virus envelope protein heterotetramer
59c2ormA_



not modelled 6.1 9
PDB header:isomerase
Chain: A: PDB Molecule:probable tautomerase hp0924;
PDBTitle: crystal structure of the 4-oxalocrotonate tautomerase homologue dmpi2 from helicobacter pylori.
60c6gxzD_



not modelled 6.1 20
PDB header:chaperone
Chain: D: PDB Molecule:pih1 domain-containing protein 1;
PDBTitle: crystal structure of the human rpap3(tpr2)-pih1d1(cs) complex
61d1o63a_



not modelled 6.0 28
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
62d2dl6a1



not modelled 5.6 31
Fold:GYF/BRK domain-like
Superfamily:BRK domain-like
Family:BRK domain-like
63c5ireD_



not modelled 5.6 18
PDB header:virus
Chain: D: PDB Molecule:m protein;
PDBTitle: the cryo-em structure of zika virus
64c5wsnD_



not modelled 5.4 23
PDB header:virus
Chain: D: PDB Molecule:m protein;
PDBTitle: structure of japanese encephalitis virus
65c2jnvA_



not modelled 5.4 18
PDB header:metal transport
Chain: A: PDB Molecule:nifu-like protein 1, chloroplast;
PDBTitle: solution structure of c-terminal domain of nifu-like2 protein from oryza sativa
66d1qd1a1



not modelled 5.2 10
Fold:Ferredoxin-like
Superfamily:Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Family:Formiminotransferase domain of formiminotransferase-cyclodeaminase.
67d2z1ea1



not modelled 5.2 13
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
68c2vd3B_



not modelled 5.1 17
PDB header:transferase
Chain: B: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: the structure of histidine inhibited hisg from2 methanobacterium thermoautotrophicum
69d1ifra_



not modelled 5.1 12
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Lamin A/C globular tail domain
Family:Lamin A/C globular tail domain

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