Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2120c_(-)_2379253_2379735
DateMon Aug 5 13:25:24 BST 2019
Unique Job ID6b9fcfb6fa29f6de
SequenceVTHVLVLLLA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:14.515 Y:30.408 Z:18.795
Model (left) based on template c5xqgC_
Top template information
PDB header:lyase
Chain: C: PDB Molecule:pcrglx protein;
PDBTitle: crystal structure of a pl 26 exo-rhamnogalacturonan lyase from2 penicillium chrysogenum complexed with unsaturated galacturonosyl3 rhamnose
Confidence and coverage
Confidence: 24.7% Coverage: 14%
23 residues ( 14% of your sequence) have been modelled with 24.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xqgC_



24.7 17
PDB header:lyase
Chain: C: PDB Molecule:pcrglx protein;
PDBTitle: crystal structure of a pl 26 exo-rhamnogalacturonan lyase from2 penicillium chrysogenum complexed with unsaturated galacturonosyl3 rhamnose
2c6g2jY_



15.6 14
PDB header:oxidoreductase
Chain: Y: PDB Molecule:mcg5603;
PDBTitle: mouse mitochondrial complex i in the active state
3c5ldwY_



14.4 17
PDB header:oxidoreductase
Chain: Y: PDB Molecule:nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
PDBTitle: structure of mammalian respiratory complex i, class1
4c3b9yA_



11.2 24
PDB header:transport protein
Chain: A: PDB Molecule:ammonium transporter family rh-like protein;
PDBTitle: crystal structure of the nitrosomonas europaea rh protein
5d2c2ia1



8.3 14
Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:MaoC-like
6c3hd6A_



8.2 24
PDB header:membrane protein, transport protein
Chain: A: PDB Molecule:ammonium transporter rh type c;
PDBTitle: crystal structure of the human rhesus glycoprotein rhcg
7d2gy9s1



5.7 43
Fold:Ribosomal protein S19
Superfamily:Ribosomal protein S19
Family:Ribosomal protein S19
8d2uubs1



5.4 36
Fold:Ribosomal protein S19
Superfamily:Ribosomal protein S19
Family:Ribosomal protein S19
9c4dsqB_



5.3 63
PDB header:oxidoreductase
Chain: B: PDB Molecule:peroxiredoxin type-2;
PDBTitle: crystal structure of peroxiredoxin ahp1 from saccharomyces cerevisiae2 in oxidized form
10c1xkmC_



5.1 36
PDB header:antibiotic
Chain: C: PDB Molecule:distinctin chain a;
PDBTitle: nmr structure of antimicrobial peptide distinctin in water

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below